RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 SPAARA0A1B0GVQ0 90 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 TMEM262E9PQX1 116 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 TMEM78Q5T7P6 136 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 CST9LQ9H4G1 147 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 PGPA6NDG6 321 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 A8MWV9 139 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 C1QTNF9P0C862 333 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 ATP5G3P48201 142 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 GOLT1AQ6ZVE7 132 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 ST20Q9HBF5 79 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 MBNL3Q9NUK0 354 aaKnown RBP7.42□□□□□ -1.22
CSMD1-216ENST00000602557 VKORC1L1Q8N0U8 176 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 ADAMTS7Q9UKP4 1686 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 IGKV3OR2-268A0A0C4DH90 116 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 FSTP19883 344 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 SNHG12Q9BXW3 62 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 RPL8P62917 257 aaKnown RBP7.42□□□□□ -1.22
CSMD1-216ENST00000602557 SEC11AP67812 179 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 PATE3B3GLJ2 98 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 AICDAQ9GZX7 198 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 MUC6Q6W4X9 2439 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 ZNF645Q8N7E2 425 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 SDF2L1Q9HCN8 221 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 SHISA3A0PJX4 238 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 NPCDR1Q9BY65 106 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 TMEM56-RWDD3S4R434 201 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 TRBV5-7A0A0A0MS05 114 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 A0A0G2JMM0 328 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 A0A1W2PPB8 328 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 KIR3DP1A8MWS1 328 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 PIN1P1O15428 100 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 CACNG7P62955 275 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 FAM27BQ5VT28 67 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 ZNF826PQ6ZT77 177 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 OR52E5Q8NH55 327 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 AMELYQ99218 206 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 CCDC168Q8NDH2 2452 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 DLL1O00548 723 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 CD33P20138 364 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 CD200R1LQ6Q8B3 271 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 CYP2G1PQ6ZSU1 146 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 RPL23P62829 140 aaKnown RBP7.41□□□□□ -1.22
CSMD1-216ENST00000602557 KIR3DS1Q14943 382 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 EBLN2Q6P2I7 272 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 LCNL1Q6ZST4 164 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 TCF24Q7RTU0 167 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 SYT8Q8NBV8 401 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 PGLYRP1O75594 196 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-216ENST00000602557 CIRBPQ14011 172 aaKnown RBP7.41□□□□□ -1.22
CSMD1-216ENST00000602557 TEX38Q6PEX7 206 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 WFDC1Q9HC57 220 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 SF3B6Q9Y3B4 125 aaKnown RBP7.41□□□□□ -1.22
CSMD1-216ENST00000602557 FOXS1O43638 330 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 SSBP2P81877 361 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-216ENST00000602557 RNASE7Q9H1E1 156 aaKnown RBP7.41□□□□□ -1.22
CSMD1-216ENST00000602557 NRXN2Q9P2S2 1712 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 NCOA6Q14686 2063 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-216ENST00000602557 IZUMO1RA6ND01 250 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 HOXA3O43365 443 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-216ENST00000602557 LEAP2Q969E1 77 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 IGHV3OR16-12A0A075B7B8 117 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 ZFP36L2P47974 494 aaKnown RBP7.41□□□□□ -1.22
CSMD1-216ENST00000602557 CCL20P78556 96 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 TMEM256Q8N2U0 113 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 TXNDC17Q9BRA2 123 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 TRBV20OR9-2A0A075B6H5 130 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 OR2H2O95918 312 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 PSG4Q00888 419 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 SCNM1Q9BWG6 230 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 EPDR1Q9UM22 224 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 FNDC1Q4ZHG4 1894 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-216ENST00000602557 ZG16O60844 167 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 PAX2Q02962 417 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 RPP21Q9H633 154 aaKnown RBP7.41□□□□□ -1.22
CSMD1-216ENST00000602557 TNFRSF6BO95407 300 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 FAM74A4Q5TZK3 123 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 ZNF562Q6V9R5 426 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 SCGB3A1Q96QR1 104 aa7.41□□□□□ -1.22
CSMD1-216ENST00000602557 CDKN1AP38936 164 aa7.4□□□□□ -1.22
CSMD1-216ENST00000602557 UNC119Q13432 240 aa7.4□□□□□ -1.22
CSMD1-216ENST00000602557 MPV17L2Q567V2 206 aa7.4□□□□□ -1.22
CSMD1-216ENST00000602557 CX3CL1P78423 397 aa7.4□□□□□ -1.22
CSMD1-216ENST00000602557 ZNF818PQ6ZRF7 136 aa7.4□□□□□ -1.22
CSMD1-216ENST00000602557 SLC22A18ASQ8N1D0 253 aa7.4□□□□□ -1.22
CSMD1-216ENST00000602557 GPR82Q96P67 336 aa7.4□□□□□ -1.22
CSMD1-216ENST00000602557 VKORC1Q9BQB6 163 aa7.4□□□□□ -1.22
CSMD1-216ENST00000602557 NPFFR1Q9GZQ6 430 aa7.4□□□□□ -1.22
CSMD1-216ENST00000602557 COL4A1P02462 1669 aa7.4□□□□□ -1.22
CSMD1-216ENST00000602557 PSMB11A5LHX3 300 aa7.4□□□□□ -1.22
CSMD1-216ENST00000602557 HSD52Q0P140 79 aa7.4□□□□□ -1.22
CSMD1-216ENST00000602557 FAM71F2Q6NXP2 309 aa7.4□□□□□ -1.22
CSMD1-216ENST00000602557 A8MWP6 167 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 MC5RP33032 325 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 RPL27AP46776 148 aaKnown RBP7.4□□□□□ -1.23
CSMD1-216ENST00000602557 NR2C2APQ86WQ0 139 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 SRSF8Q9BRL6 282 aaKnown RBP7.4□□□□□ -1.23
CSMD1-216ENST00000602557 PRDM14Q9GZV8 571 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 TSSC4Q9Y5U2 329 aaPredicted RBP7.4□□□□□ -1.23
CSMD1-216ENST00000602557 IGHV1-69-2A0A0G2JMI3 117 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 TSPOP30536 169 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms