RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 STHQ8IWL8 128 aa11.49□□□□□ -0.57
SSBP4-211ENST00000601614 CSNK1G2-AS1Q8NCQ2 148 aa11.49□□□□□ -0.57
SSBP4-211ENST00000601614 SECTM1Q8WVN6 248 aa11.49□□□□□ -0.57
SSBP4-211ENST00000601614 DGCR14Q96DF8 476 aaKnown RBP11.49□□□□□ -0.57
SSBP4-211ENST00000601614 CMTM3Q96MX0 182 aa11.49□□□□□ -0.57
SSBP4-211ENST00000601614 TRAV14DV4A0A0A6YYC5 116 aa11.48□□□□□ -0.57
SSBP4-211ENST00000601614 IGHV3-66A0A0C4DH42 116 aa11.48□□□□□ -0.57
SSBP4-211ENST00000601614 C16orf90A8MZG2 172 aa11.48□□□□□ -0.57
SSBP4-211ENST00000601614 PTGES3LE9PB15 166 aa11.48□□□□□ -0.57
SSBP4-211ENST00000601614 CYB5BO43169 146 aa11.48□□□□□ -0.57
SSBP4-211ENST00000601614 DFFBO76075 338 aa11.48□□□□□ -0.57
SSBP4-211ENST00000601614 HPRT1P00492 218 aa11.48□□□□□ -0.57
SSBP4-211ENST00000601614 PTHLHP12272 177 aa11.48□□□□□ -0.57
SSBP4-211ENST00000601614 NQO2P16083 231 aa11.48□□□□□ -0.57
SSBP4-211ENST00000601614 AIFM2Q9BRQ8 373 aa11.48□□□□□ -0.57
SSBP4-211ENST00000601614 VSIRQ9H7M9 311 aa11.48□□□□□ -0.57
SSBP4-211ENST00000601614 NDUFA4L2Q9NRX3 87 aa11.48□□□□□ -0.57
SSBP4-211ENST00000601614 IFITM5A6NNB3 132 aa11.47□□□□□ -0.57
SSBP4-211ENST00000601614 KNCNA6PVL3 124 aa11.47□□□□□ -0.57
SSBP4-211ENST00000601614 SSX5O60225 188 aa11.47□□□□□ -0.57
SSBP4-211ENST00000601614 FGF2P09038 288 aa11.47□□□□□ -0.57
SSBP4-211ENST00000601614 PAFAH1B2P68402 229 aa11.47□□□□□ -0.57
SSBP4-211ENST00000601614 RELQ04864 619 aaPredicted RBP11.47□□□□□ -0.57
SSBP4-211ENST00000601614 TNP2Q05952 138 aa11.47□□□□□ -0.57
SSBP4-211ENST00000601614 HACD4Q5VWC8 232 aa11.47□□□□□ -0.57
SSBP4-211ENST00000601614 THOC7Q6I9Y2 204 aaKnown RBP11.47□□□□□ -0.57
SSBP4-211ENST00000601614 Q8N1X5 172 aa11.47□□□□□ -0.57
SSBP4-211ENST00000601614 DMBX1Q8NFW5 382 aa11.47□□□□□ -0.57
SSBP4-211ENST00000601614 HINT2Q9BX68 163 aa11.47□□□□□ -0.57
SSBP4-211ENST00000601614 NXF2Q9GZY0 626 aaKnown RBP11.47□□□□□ -0.57
SSBP4-211ENST00000601614 ATG5Q9H1Y0 275 aa11.47□□□□□ -0.57
SSBP4-211ENST00000601614 DCSTAMPQ9H295 470 aa11.47□□□□□ -0.57
SSBP4-211ENST00000601614 ANXA10Q9UJ72 324 aa11.47□□□□□ -0.57
SSBP4-211ENST00000601614 METTL21EPA6NDL7 271 aa11.46□□□□□ -0.57
SSBP4-211ENST00000601614 TMEM235A6NFC5 223 aa11.46□□□□□ -0.57
SSBP4-211ENST00000601614 DNASE2O00115 360 aaPredicted RBP11.46□□□□□ -0.57
SSBP4-211ENST00000601614 ST8SIA3O43173 380 aa11.46□□□□□ -0.57
SSBP4-211ENST00000601614 IFNA10P01566 189 aa11.46□□□□□ -0.57
SSBP4-211ENST00000601614 IGHV3-48P01763 117 aa11.46□□□□□ -0.57
SSBP4-211ENST00000601614 HSMCR30P0CW71 290 aa11.46□□□□□ -0.57
SSBP4-211ENST00000601614 HSD17B13Q7Z5P4 300 aaPredicted RBP11.46□□□□□ -0.57
SSBP4-211ENST00000601614 C10orf67Q8IYJ2 551 aa11.46□□□□□ -0.57
SSBP4-211ENST00000601614 CENPSQ8N2Z9 138 aa11.46□□□□□ -0.57
SSBP4-211ENST00000601614 OR1L8Q8NGR8 309 aa11.46□□□□□ -0.57
SSBP4-211ENST00000601614 OR13F1Q8NGS4 319 aa11.46□□□□□ -0.57
SSBP4-211ENST00000601614 LSM10Q969L4 123 aaKnown RBP11.46□□□□□ -0.57
SSBP4-211ENST00000601614 TBC1D24Q9ULP9 559 aa11.46□□□□□ -0.57
SSBP4-211ENST00000601614 NSG2Q9Y328 171 aa11.46□□□□□ -0.57
SSBP4-211ENST00000601614 DNAH5Q8TE73 4624 aa11.45□□□□□ -0.58
SSBP4-211ENST00000601614 I3L2K1 104 aa11.45□□□□□ -0.58
SSBP4-211ENST00000601614 SPP1P10451 314 aa11.45□□□□□ -0.58
SSBP4-211ENST00000601614 TRAM1Q15629 374 aa11.45□□□□□ -0.58
SSBP4-211ENST00000601614 MSMO1Q15800 293 aa11.45□□□□□ -0.58
SSBP4-211ENST00000601614 TMEM41BQ5BJD5 291 aa11.45□□□□□ -0.58
SSBP4-211ENST00000601614 C1orf134Q5TEV5 83 aa11.45□□□□□ -0.58
SSBP4-211ENST00000601614 MORN3Q6PF18 240 aaPredicted RBP11.45□□□□□ -0.58
SSBP4-211ENST00000601614 TOMM20LQ6UXN7 152 aa11.45□□□□□ -0.58
SSBP4-211ENST00000601614 UBE2DNLQ8IWF7 75 aa11.45□□□□□ -0.58
SSBP4-211ENST00000601614 OR51H1Q8NH63 302 aa11.45□□□□□ -0.58
SSBP4-211ENST00000601614 SLC25A46Q96AG3 418 aa11.45□□□□□ -0.58
SSBP4-211ENST00000601614 PLEKHA2Q9HB19 425 aa11.45□□□□□ -0.58
SSBP4-211ENST00000601614 TRAV2A0A0B4J234 112 aa11.44□□□□□ -0.58
SSBP4-211ENST00000601614 DBX1A6NMT0 343 aa11.44□□□□□ -0.58
SSBP4-211ENST00000601614 PSMA1P25786 263 aaKnown RBP11.44□□□□□ -0.58
SSBP4-211ENST00000601614 FCGR2CP31995 323 aa11.44□□□□□ -0.58
SSBP4-211ENST00000601614 RANBP1P43487 201 aa11.44□□□□□ -0.58
SSBP4-211ENST00000601614 UBE2UQ5VVX9 321 aa11.44□□□□□ -0.58
SSBP4-211ENST00000601614 PACRGLQ8N7B6 248 aa11.44□□□□□ -0.58
SSBP4-211ENST00000601614 TMEM14BQ9NUH8 114 aa11.44□□□□□ -0.58
SSBP4-211ENST00000601614 RABAC1Q9UI14 185 aa11.44□□□□□ -0.58
SSBP4-211ENST00000601614 K7EQG2 157 aa11.43□□□□□ -0.58
SSBP4-211ENST00000601614 IFNA21P01568 189 aa11.43□□□□□ -0.58
SSBP4-211ENST00000601614 IFNA17P01571 189 aa11.43□□□□□ -0.58
SSBP4-211ENST00000601614 MFAP4P55083 255 aa11.43□□□□□ -0.58
SSBP4-211ENST00000601614 RPL11P62913 178 aaKnown RBP11.43□□□□□ -0.58
SSBP4-211ENST00000601614 CATR1Q13166 79 aa11.43□□□□□ -0.58
SSBP4-211ENST00000601614 ARL6IP1Q15041 203 aa11.43□□□□□ -0.58
SSBP4-211ENST00000601614 SOHLH1Q5JUK2 328 aa11.43□□□□□ -0.58
SSBP4-211ENST00000601614 ZNF818PQ6ZRF7 136 aa11.43□□□□□ -0.58
SSBP4-211ENST00000601614 ZBTB34Q8NCN2 500 aa11.43□□□□□ -0.58
SSBP4-211ENST00000601614 DUSP18Q8NEJ0 188 aa11.43□□□□□ -0.58
SSBP4-211ENST00000601614 SLC5A7Q9GZV3 580 aa11.43□□□□□ -0.58
SSBP4-211ENST00000601614 ZFAND3Q9H8U3 227 aa11.43□□□□□ -0.58
SSBP4-211ENST00000601614 SCRT2Q9NQ03 307 aa11.43□□□□□ -0.58
SSBP4-211ENST00000601614 SMIM30A4D0T7 59 aa11.42□□□□□ -0.58
SSBP4-211ENST00000601614 MARCH11A6NNE9 402 aa11.42□□□□□ -0.58
SSBP4-211ENST00000601614 PPYP01298 95 aa11.42□□□□□ -0.58
SSBP4-211ENST00000601614 CD5P06127 495 aa11.42□□□□□ -0.58
SSBP4-211ENST00000601614 EIF4EP06730 217 aaKnown RBP11.42□□□□□ -0.58
SSBP4-211ENST00000601614 MLLT11Q13015 90 aaPredicted RBP11.42□□□□□ -0.58
SSBP4-211ENST00000601614 OR1P1Q8NH06 330 aa11.42□□□□□ -0.58
SSBP4-211ENST00000601614 MISP3Q96FF7 219 aa11.42□□□□□ -0.58
SSBP4-211ENST00000601614 COMMD9Q9P000 198 aa11.42□□□□□ -0.58
SSBP4-211ENST00000601614 OR51B2Q9Y5P1 312 aa11.42□□□□□ -0.58
SSBP4-211ENST00000601614 TRAV1-2A0A0B4J238 106 aa11.41□□□□□ -0.58
SSBP4-211ENST00000601614 ERICH4A6NGS2 130 aa11.41□□□□□ -0.58
SSBP4-211ENST00000601614 MT-CO2P00403 227 aa11.41□□□□□ -0.58
SSBP4-211ENST00000601614 ZNF688P0C7X2 276 aa11.41□□□□□ -0.58
SSBP4-211ENST00000601614 FXYD4P59646 89 aa11.41□□□□□ -0.58
SSBP4-211ENST00000601614 GNG2P59768 71 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms