RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 THYN1Q9P016 225 aa9.83□□□□□ -0.84
USE1-209ENST00000601592 ZMAT5Q9UDW3 170 aaKnown RBP9.83□□□□□ -0.84
USE1-209ENST00000601592 SORL1Q92673 2214 aa9.83□□□□□ -0.84
USE1-209ENST00000601592 IGHV3-21A0A0B4J1V1 117 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 A0A0G2JRQ6 117 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 ST8SIA3O43173 380 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 CDS2O95674 445 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 HLA-AP01891 365 aaKnown RBP9.82□□□□□ -0.84
USE1-209ENST00000601592 P0C879 139 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 ANXA3P12429 323 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 VAMP1P23763 118 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 ARL3P36405 182 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 HOXA1P49639 335 aaPredicted RBP9.82□□□□□ -0.84
USE1-209ENST00000601592 CCR6P51684 374 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 HSPE1P61604 102 aaKnown RBP9.82□□□□□ -0.84
USE1-209ENST00000601592 PRCDQ00LT1 54 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 TATDN3Q17R31 274 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 CNPY1Q3B7I2 92 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 FAM209BQ5JX69 171 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 ACSM6Q6P461 480 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 ZNF429Q86V71 674 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 SELENOHQ8IZQ5 122 aaKnown RBP9.82□□□□□ -0.84
USE1-209ENST00000601592 DEDD2Q8WXF8 326 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 CCDC140Q96MF4 163 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 SDHCQ99643 169 aaPredicted RBP9.82□□□□□ -0.84
USE1-209ENST00000601592 ZC4H2Q9NQZ6 224 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 DMRT1Q9Y5R6 373 aa9.82□□□□□ -0.84
USE1-209ENST00000601592 F11RQ9Y624 299 aaKnown RBP9.82□□□□□ -0.84
USE1-209ENST00000601592 A0A0B4J293 547 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 WI2-2373I1.2A0A1W2PRP0 233 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 CENPXA8MT69 81 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 IL7P13232 177 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 GPR183P32249 361 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 INSL3P51460 131 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 ERHP84090 104 aaKnown RBP9.81□□□□□ -0.84
USE1-209ENST00000601592 KLF5Q13887 457 aaPredicted RBP9.81□□□□□ -0.84
USE1-209ENST00000601592 TMEM187Q14656 261 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 RBMS2Q15434 407 aaKnown RBP9.81□□□□□ -0.84
USE1-209ENST00000601592 HAPLN4Q86UW8 402 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 FAM219AQ8IW50 185 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 OR9G4Q8NGQ1 327 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 MISP3Q96FF7 219 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 GALNT14Q96FL9 552 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 PRR25Q96S07 402 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 SLC25A21Q9BQT8 299 aaPredicted RBP9.81□□□□□ -0.84
USE1-209ENST00000601592 ENY2Q9NPA8 101 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 CACNG5Q9UF02 275 aa9.81□□□□□ -0.84
USE1-209ENST00000601592 TRBV7-1A0A0A6YYK4 115 aa9.8□□□□□ -0.84
USE1-209ENST00000601592 NAP1L6A6NFF2 107 aa9.8□□□□□ -0.84
USE1-209ENST00000601592 A6NHS1 94 aa9.8□□□□□ -0.84
USE1-209ENST00000601592 GGCTO75223 188 aaKnown RBP9.8□□□□□ -0.84
USE1-209ENST00000601592 NXPH3O95157 252 aa9.8□□□□□ -0.84
USE1-209ENST00000601592 OR2C1O95371 312 aa9.8□□□□□ -0.84
USE1-209ENST00000601592 MFAP2P55001 183 aa9.8□□□□□ -0.84
USE1-209ENST00000601592 SUPT4H1P63272 117 aaKnown RBP9.8□□□□□ -0.84
USE1-209ENST00000601592 DEFB121Q5J5C9 76 aa9.8□□□□□ -0.84
USE1-209ENST00000601592 CENPSQ8N2Z9 138 aa9.8□□□□□ -0.84
USE1-209ENST00000601592 OR2C3Q8N628 320 aa9.8□□□□□ -0.84
USE1-209ENST00000601592 UBAC2Q8NBM4 344 aa9.8□□□□□ -0.84
USE1-209ENST00000601592 OR1L6Q8NGR2 347 aa9.8□□□□□ -0.84
USE1-209ENST00000601592 PINX1Q96BK5 328 aaKnown RBP9.8□□□□□ -0.84
USE1-209ENST00000601592 GPR146Q96CH1 333 aa9.8□□□□□ -0.84
USE1-209ENST00000601592 TMEM56-RWDD3S4R434 201 aa9.8□□□□□ -0.84
USE1-209ENST00000601592 K7EIL1 84 aa9.79□□□□□ -0.84
USE1-209ENST00000601592 SNCAP37840 140 aa9.79□□□□□ -0.84
USE1-209ENST00000601592 SRPXP78539 464 aa9.79□□□□□ -0.84
USE1-209ENST00000601592 TMEM128Q5BJH2 165 aa9.79□□□□□ -0.84
USE1-209ENST00000601592 Q6ZRM9 215 aa9.79□□□□□ -0.84
USE1-209ENST00000601592 LGI3Q8N145 548 aa9.79□□□□□ -0.84
USE1-209ENST00000601592 OR1P1Q8NH06 330 aa9.79□□□□□ -0.84
USE1-209ENST00000601592 ZNF502Q8TBZ5 544 aa9.79□□□□□ -0.84
USE1-209ENST00000601592 VN1R17PQ8TDU5 208 aa9.79□□□□□ -0.84
USE1-209ENST00000601592 IL22RA2Q969J5 263 aa9.79□□□□□ -0.84
USE1-209ENST00000601592 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.79□□□□□ -0.84
USE1-209ENST00000601592 PEMTQ9UBM1 199 aa9.79□□□□□ -0.84
USE1-209ENST00000601592 ZNF256Q9Y2P7 627 aaPredicted RBP9.79□□□□□ -0.84
USE1-209ENST00000601592 IGHV3-35A0A0C4DH35 117 aa9.78□□□□□ -0.84
USE1-209ENST00000601592 ZNF320A2RRD8 509 aa9.78□□□□□ -0.84
USE1-209ENST00000601592 OR2T8A6NH00 312 aa9.78□□□□□ -0.84
USE1-209ENST00000601592 CEBPZOSA8MTT3 80 aa9.78□□□□□ -0.84
USE1-209ENST00000601592 CLEC3BP05452 202 aa9.78□□□□□ -0.84
USE1-209ENST00000601592 SULT1A3P0DMM9 295 aa9.78□□□□□ -0.84
USE1-209ENST00000601592 SULT1A4P0DMN0 295 aa9.78□□□□□ -0.84
USE1-209ENST00000601592 PPP1R1AQ13522 171 aa9.78□□□□□ -0.84
USE1-209ENST00000601592 KLK9Q2XQG4 91 aa9.78□□□□□ -0.84
USE1-209ENST00000601592 Q56UQ5 140 aa9.78□□□□□ -0.84
USE1-209ENST00000601592 PLET1Q6UQ28 207 aa9.78□□□□□ -0.84
USE1-209ENST00000601592 LYZL2Q7Z4W2 148 aa9.78□□□□□ -0.84
USE1-209ENST00000601592 C7orf50Q9BRJ6 194 aaKnown RBP9.78□□□□□ -0.84
USE1-209ENST00000601592 C21orf62Q9NYP8 219 aa9.78□□□□□ -0.84
USE1-209ENST00000601592 KLK9Q9UKQ9 250 aa9.78□□□□□ -0.84
USE1-209ENST00000601592 DNAH3Q8TD57 4116 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 A0A0B4J2A0 478 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 K7EIM0 57 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 TGOLN2O43493 480 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 NDUFB6O95139 128 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 IGHV3-48P01763 117 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 SPNP16150 400 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 SUB1P53999 127 aaKnown RBP eCLIP9.77□□□□□ -0.85
USE1-209ENST00000601592 SPCS3P61009 180 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms