RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 YPEL3P61236 119 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-225ENST00000600733 IGFL3Q6UXB1 125 aa16.49■□□□□ 0.23
SHKBP1-225ENST00000600733 OR10W1Q8NGF6 305 aa16.49■□□□□ 0.23
SHKBP1-225ENST00000600733 CORO2AQ92828 525 aa16.49■□□□□ 0.23
SHKBP1-225ENST00000600733 IL36BQ9NZH7 164 aa16.49■□□□□ 0.23
SHKBP1-225ENST00000600733 C9JCJ5 164 aa16.49■□□□□ 0.23
SHKBP1-225ENST00000600733 ZCCHC24Q8N2G6 241 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-225ENST00000600733 ZNF503Q96F45 646 aa16.49■□□□□ 0.23
SHKBP1-225ENST00000600733 CHODLQ9H9P2 273 aa16.49■□□□□ 0.23
SHKBP1-225ENST00000600733 DCHS1Q96JQ0 3298 aa16.49■□□□□ 0.23
SHKBP1-225ENST00000600733 KALRNO60229 2985 aa16.48■□□□□ 0.23
SHKBP1-225ENST00000600733 FNDC10F2Z333 226 aa16.48■□□□□ 0.23
SHKBP1-225ENST00000600733 FRMD6-AS1P0C7T7 363 aa16.48■□□□□ 0.23
SHKBP1-225ENST00000600733 TNFSF4P23510 183 aa16.48■□□□□ 0.23
SHKBP1-225ENST00000600733 CRYBB3P26998 211 aa16.48■□□□□ 0.23
SHKBP1-225ENST00000600733 OR10J1P30954 320 aa16.48■□□□□ 0.23
SHKBP1-225ENST00000600733 OR9G1Q8NH87 305 aa16.48■□□□□ 0.23
SHKBP1-225ENST00000600733 SFXN3Q9BWM7 321 aa16.48■□□□□ 0.23
SHKBP1-225ENST00000600733 DMXL2Q8TDJ6 3036 aa16.48■□□□□ 0.23
SHKBP1-225ENST00000600733 TM4SF5O14894 197 aa16.48■□□□□ 0.23
SHKBP1-225ENST00000600733 IRF2P14316 349 aa16.48■□□□□ 0.23
SHKBP1-225ENST00000600733 Q6ZS92 163 aa16.48■□□□□ 0.23
SHKBP1-225ENST00000600733 A8MXE2 369 aa16.47■□□□□ 0.23
SHKBP1-225ENST00000600733 OR7C2O60412 319 aa16.47■□□□□ 0.23
SHKBP1-225ENST00000600733 SNRPCP09234 159 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-225ENST00000600733 OR10J4P0C629 311 aa16.47■□□□□ 0.23
SHKBP1-225ENST00000600733 AREGP15514 252 aa16.47■□□□□ 0.23
SHKBP1-225ENST00000600733 ERVFC1-1P60608 527 aa16.47■□□□□ 0.23
SHKBP1-225ENST00000600733 IQCJQ1A5X6 159 aa16.47■□□□□ 0.23
SHKBP1-225ENST00000600733 CENPWQ5EE01 88 aa16.47■□□□□ 0.23
SHKBP1-225ENST00000600733 NOL4LQ96MY1 436 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-225ENST00000600733 MRPL20Q9BYC9 149 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-225ENST00000600733 SLC25A10Q9UBX3 287 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-225ENST00000600733 CUL9Q8IWT3 2517 aa16.47■□□□□ 0.23
SHKBP1-225ENST00000600733 SCGB1D1O95968 90 aa16.47■□□□□ 0.23
SHKBP1-225ENST00000600733 FKBP11Q9NYL4 201 aa16.47■□□□□ 0.23
SHKBP1-225ENST00000600733 hADV38S2A0JD32 116 aa16.46■□□□□ 0.23
SHKBP1-225ENST00000600733 RNASE2P10153 161 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-225ENST00000600733 TEX36Q5VZQ5 186 aa16.46■□□□□ 0.23
SHKBP1-225ENST00000600733 TP53TG3Q9ULZ0 132 aa16.46■□□□□ 0.23
SHKBP1-225ENST00000600733 BSNQ9UPA5 3926 aa16.46■□□□□ 0.23
SHKBP1-225ENST00000600733 HELTA6NFD8 242 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 CCL3L1P16619 93 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 CEACAM8P31997 349 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 REG1BP48304 166 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 GNG4P50150 75 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 LGALS4P56470 323 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 KRTCAP3Q53RY4 240 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 C2orf83Q53S99 150 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 IGF2-ASQ6U949 168 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 RBMXL3Q8N7X1 1067 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 MRPL18Q9H0U6 180 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 TMEM167BQ9NRX6 74 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 BET1LQ9NYM9 111 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 TECRQ9NZ01 308 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 LINC00312Q9Y6C7 94 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 V9GYV3 84 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 ZNF292O60281 2723 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 PQLC2Q6ZP29 291 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 DOLPP1Q86YN1 238 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 MMD2Q8IY49 270 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 HARBI1Q96MB7 349 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 NDUFAF3Q9BU61 184 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 LY96Q9Y6Y9 160 aa16.45■□□□□ 0.22
SHKBP1-225ENST00000600733 GGTLC3B5MD39 225 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 CD33P20138 364 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 CHRNB4P30926 498 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 IER3P46695 156 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 RAB4BP61018 213 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 ZNF833PQ6ZTB9 187 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 OR1L6Q8NGR2 347 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 OR5B3Q8NH48 314 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 MISP3Q96FF7 219 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 MS4A10Q96PG2 267 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 PCNX1Q96RV3 2341 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 NAV3Q8IVL0 2385 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 E7EUB6 86 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 FCN3O75636 299 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 LINC00310P59036 64 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 SELENOTP62341 195 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 RPEL1Q2QD12 228 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 OR8I2Q8N0Y5 310 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 CMTM2Q8TAZ6 248 aa16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 RNASE7Q9H1E1 156 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-225ENST00000600733 RNF224P0DH78 156 aa16.43■□□□□ 0.22
SHKBP1-225ENST00000600733 OR1L8Q8NGR8 309 aa16.43■□□□□ 0.22
SHKBP1-225ENST00000600733 SLC35E1Q96K37 410 aa16.43■□□□□ 0.22
SHKBP1-225ENST00000600733 ANKRD11Q6UB99 2663 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-225ENST00000600733 PKDREJQ9NTG1 2253 aa16.43■□□□□ 0.22
SHKBP1-225ENST00000600733 FCN1O00602 326 aa16.43■□□□□ 0.22
SHKBP1-225ENST00000600733 OR5G3P0C626 314 aa16.43■□□□□ 0.22
SHKBP1-225ENST00000600733 CD69Q07108 199 aa16.43■□□□□ 0.22
SHKBP1-225ENST00000600733 MORN5Q5VZ52 161 aa16.43■□□□□ 0.22
SHKBP1-225ENST00000600733 OR2T6Q8NHC8 308 aa16.43■□□□□ 0.22
SHKBP1-225ENST00000600733 ARL2-SNX15V9GYD0 113 aa16.43■□□□□ 0.22
SHKBP1-225ENST00000600733 TRAV9-1A0A075B6T8 112 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 NKX6-3A6NJ46 265 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 H0YJW9 148 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 SPINK4O60575 86 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 SUMO1P63165 101 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms