RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 WRBO00258 174 aa13.04□□□□□ -0.32
USHBP1-210ENST00000600286 LY86O95711 162 aa13.04□□□□□ -0.32
USHBP1-210ENST00000600286 RPLP1P05386 114 aaKnown RBP13.04□□□□□ -0.32
USHBP1-210ENST00000600286 REG1AP05451 166 aa13.04□□□□□ -0.32
USHBP1-210ENST00000600286 CDX1P47902 265 aaPredicted RBP13.04□□□□□ -0.32
USHBP1-210ENST00000600286 KRTAP10-3P60369 221 aa13.04□□□□□ -0.32
USHBP1-210ENST00000600286 TNFRSF9Q07011 255 aa13.04□□□□□ -0.32
USHBP1-210ENST00000600286 SRSF4Q08170 494 aaKnown RBP13.04□□□□□ -0.32
USHBP1-210ENST00000600286 NSUN5P1Q3KNT7 163 aa13.04□□□□□ -0.32
USHBP1-210ENST00000600286 SLC25A24Q6NUK1 477 aa13.04□□□□□ -0.32
USHBP1-210ENST00000600286 GSG1LQ6UXU4 331 aa13.04□□□□□ -0.32
USHBP1-210ENST00000600286 UBE2E2Q96LR5 201 aa13.04□□□□□ -0.32
USHBP1-210ENST00000600286 GSKIPQ9P0R6 139 aa13.04□□□□□ -0.32
USHBP1-210ENST00000600286 PLXNB1O43157 2135 aa13.04□□□□□ -0.32
USHBP1-210ENST00000600286 TNCP24821 2201 aa13.04□□□□□ -0.32
USHBP1-210ENST00000600286 A0A1B0GW64 132 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 A0A1W2PRX2 142 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 CGB1A6NKQ9 187 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 FAM223BA6NKX1 122 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 INS-IGF2F8WCM5 200 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 SOX15O60248 233 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 RPL23AP62750 156 aaKnown RBP13.03□□□□□ -0.32
USHBP1-210ENST00000600286 RPP30P78346 268 aaKnown RBP13.03□□□□□ -0.32
USHBP1-210ENST00000600286 ATP5G2Q06055 141 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 WT1-ASQ06250 92 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 TATDN3Q17R31 274 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 C2orf68Q2NKX9 166 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 PDLIM3Q53GG5 364 aaPredicted RBP13.03□□□□□ -0.32
USHBP1-210ENST00000600286 SPINK9Q5DT21 86 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 FAM223AQ8IWN6 122 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 OR2C3Q8N628 320 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 NECAP1Q8NC96 275 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 CIB3Q96Q77 187 aaPredicted RBP13.03□□□□□ -0.32
USHBP1-210ENST00000600286 KLK15Q9H2R5 256 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 HSPB7Q9UBY9 170 aa13.03□□□□□ -0.32
USHBP1-210ENST00000600286 NXPH3O95157 252 aa13.02□□□□□ -0.33
USHBP1-210ENST00000600286 HTR2BP41595 481 aa13.02□□□□□ -0.33
USHBP1-210ENST00000600286 NKX2-1P43699 371 aaPredicted RBP13.02□□□□□ -0.33
USHBP1-210ENST00000600286 RHOGP84095 191 aa13.02□□□□□ -0.33
USHBP1-210ENST00000600286 TCTEX1D4Q5JR98 221 aa13.02□□□□□ -0.33
USHBP1-210ENST00000600286 FAM209BQ5JX69 171 aa13.02□□□□□ -0.33
USHBP1-210ENST00000600286 ZNF491Q8N8L2 437 aa13.02□□□□□ -0.33
USHBP1-210ENST00000600286 OR4F17Q8NGA8 305 aa13.02□□□□□ -0.33
USHBP1-210ENST00000600286 OR1P1Q8NH06 330 aa13.02□□□□□ -0.33
USHBP1-210ENST00000600286 DTD1Q8TEA8 209 aa13.02□□□□□ -0.33
USHBP1-210ENST00000600286 OR4F4Q96R69 305 aa13.02□□□□□ -0.33
USHBP1-210ENST00000600286 FBXL7Q9UJT9 491 aa13.02□□□□□ -0.33
USHBP1-210ENST00000600286 F11RQ9Y624 299 aaKnown RBP13.02□□□□□ -0.33
USHBP1-210ENST00000600286 PITX3O75364 302 aa13.01□□□□□ -0.33
USHBP1-210ENST00000600286 ATP5IP56385 69 aaPredicted RBP13.01□□□□□ -0.33
USHBP1-210ENST00000600286 CYCSP99999 105 aaKnown RBP13.01□□□□□ -0.33
USHBP1-210ENST00000600286 OXA1LQ15070 435 aa13.01□□□□□ -0.33
USHBP1-210ENST00000600286 LCNL1Q6ZST4 164 aa13.01□□□□□ -0.33
USHBP1-210ENST00000600286 ZBTB8BQ8NAP8 495 aaPredicted RBP13.01□□□□□ -0.33
USHBP1-210ENST00000600286 KLHL30-AS1Q8NEE0 82 aa13.01□□□□□ -0.33
USHBP1-210ENST00000600286 C2orf50Q96LR7 162 aa13.01□□□□□ -0.33
USHBP1-210ENST00000600286 RBKSQ9H477 322 aa13.01□□□□□ -0.33
USHBP1-210ENST00000600286 U3KQ87 197 aa13.01□□□□□ -0.33
USHBP1-210ENST00000600286 TRBV9A0A0B4J1U6 114 aa13□□□□□ -0.33
USHBP1-210ENST00000600286 CORTO00230 105 aa13□□□□□ -0.33
USHBP1-210ENST00000600286 CCSO14618 274 aa13□□□□□ -0.33
USHBP1-210ENST00000600286 SYNGR2O43760 224 aa13□□□□□ -0.33
USHBP1-210ENST00000600286 OR2J3O76001 311 aa13□□□□□ -0.33
USHBP1-210ENST00000600286 SCGB1D2O95969 90 aa13□□□□□ -0.33
USHBP1-210ENST00000600286 IFNA10P01566 189 aa13□□□□□ -0.33
USHBP1-210ENST00000600286 PRH1P02810 166 aa13□□□□□ -0.33
USHBP1-210ENST00000600286 C4orf3Q8WVX3 66 aa13□□□□□ -0.33
USHBP1-210ENST00000600286 CXorf58Q96LI9 332 aa13□□□□□ -0.33
USHBP1-210ENST00000600286 ALG5Q9Y673 324 aa13□□□□□ -0.33
USHBP1-210ENST00000600286 PKD1L1Q8TDX9 2849 aa12.99□□□□□ -0.33
USHBP1-210ENST00000600286 C7orf66A4D0T2 115 aa12.99□□□□□ -0.33
USHBP1-210ENST00000600286 GOSR2O14653 212 aa12.99□□□□□ -0.33
USHBP1-210ENST00000600286 ID3Q02535 119 aa12.99□□□□□ -0.33
USHBP1-210ENST00000600286 ZNF114Q8NC26 417 aa12.99□□□□□ -0.33
USHBP1-210ENST00000600286 MYOZ3Q8TDC0 251 aa12.99□□□□□ -0.33
USHBP1-210ENST00000600286 DPF1Q92782 380 aa12.99□□□□□ -0.33
USHBP1-210ENST00000600286 EEF1AKMT3Q96AZ1 226 aa12.99□□□□□ -0.33
USHBP1-210ENST00000600286 OR10C1Q96KK4 312 aa12.99□□□□□ -0.33
USHBP1-210ENST00000600286 P2RX4Q99571 388 aa12.99□□□□□ -0.33
USHBP1-210ENST00000600286 MED28Q9H204 178 aa12.99□□□□□ -0.33
USHBP1-210ENST00000600286 IGLV11-55A0A075B6I3 123 aa12.98□□□□□ -0.33
USHBP1-210ENST00000600286 MPTX1A8MV57 137 aa12.98□□□□□ -0.33
USHBP1-210ENST00000600286 IGHV3-11P01762 117 aa12.98□□□□□ -0.33
USHBP1-210ENST00000600286 RAB11AP62491 216 aa12.98□□□□□ -0.33
USHBP1-210ENST00000600286 C15orf32Q32M92 178 aa12.98□□□□□ -0.33
USHBP1-210ENST00000600286 SLC24A4Q8NFF2 622 aa12.98□□□□□ -0.33
USHBP1-210ENST00000600286 OR4D5Q8NGN0 318 aa12.98□□□□□ -0.33
USHBP1-210ENST00000600286 MISP3Q96FF7 219 aa12.98□□□□□ -0.33
USHBP1-210ENST00000600286 FANCD2OSQ96PS1 177 aa12.98□□□□□ -0.33
USHBP1-210ENST00000600286 OR5B12Q96R08 314 aa12.98□□□□□ -0.33
USHBP1-210ENST00000600286 MAGT1Q9H0U3 335 aa12.98□□□□□ -0.33
USHBP1-210ENST00000600286 TRBV7-1A0A0A6YYK4 115 aa12.97□□□□□ -0.33
USHBP1-210ENST00000600286 L7N2F9 121 aa12.97□□□□□ -0.33
USHBP1-210ENST00000600286 PF4P02776 101 aa12.97□□□□□ -0.33
USHBP1-210ENST00000600286 RLN2P04090 185 aa12.97□□□□□ -0.33
USHBP1-210ENST00000600286 LGALS1P09382 135 aaKnown RBP12.97□□□□□ -0.33
USHBP1-210ENST00000600286 PVALBP20472 110 aaPredicted RBP12.97□□□□□ -0.33
USHBP1-210ENST00000600286 NPY1RP25929 384 aa12.97□□□□□ -0.33
USHBP1-210ENST00000600286 VAMP2P63027 116 aa12.97□□□□□ -0.33
USHBP1-210ENST00000600286 EXOSC2Q13868 293 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms