RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 DBX1A6NMT0 343 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 C15orf61A6NNL5 157 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 C11orf94C9JXX5 98 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 I3L2K1 104 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 XRCC3O43542 346 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 PPYP01298 95 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 APOHP02749 345 aaPredicted RBP4.42□□□□□ -1.7
VRK3-220ENST00000600259 HLA-DMBP28068 263 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 GNRHRP30968 328 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 TFPI2P48307 235 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 TMEM187Q14656 261 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 LCE2AQ5TA79 106 aaPredicted RBP4.42□□□□□ -1.7
VRK3-220ENST00000600259 THOC7Q6I9Y2 204 aaKnown RBP4.42□□□□□ -1.7
VRK3-220ENST00000600259 ZNF818PQ6ZRF7 136 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 HSD17B13Q7Z5P4 300 aaPredicted RBP4.42□□□□□ -1.7
VRK3-220ENST00000600259 HOGA1Q86XE5 327 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 FAM24BQ8N5W8 94 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 TMEM116Q8NCL8 245 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 CSNK1G2-AS1Q8NCQ2 148 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 BEST4Q8NFU0 473 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 OR13F1Q8NGS4 319 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 SECTM1Q8WVN6 248 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 NRG4Q8WWG1 115 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 GIMAP1Q8WWP7 306 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 C6orf62Q9GZU0 229 aaPredicted RBP4.42□□□□□ -1.7
VRK3-220ENST00000600259 SLC5A7Q9GZV3 580 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 NXF2Q9GZY0 626 aaKnown RBP4.42□□□□□ -1.7
VRK3-220ENST00000600259 VSIRQ9H7M9 311 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 NDUFB11Q9NX14 153 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 X6R8D5 127 aa4.42□□□□□ -1.7
VRK3-220ENST00000600259 IGKV3-7A0A075B6H7 116 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 IGHV4-4A0A075B6R2 117 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 IGHV3OR16-13A0A075B7E8 117 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 TRAV14DV4A0A0A6YYC5 116 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 IGHV3-74A0A0B4J1X5 117 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 IGHV4-28A0A0C4DH34 117 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 NOTOA8MTQ0 251 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 ZNF705EA8MWA4 302 aaPredicted RBP4.41□□□□□ -1.7
VRK3-220ENST00000600259 MRPS14O60783 128 aaKnown RBP4.41□□□□□ -1.7
VRK3-220ENST00000600259 PGLYRP1O75594 196 aaPredicted RBP4.41□□□□□ -1.7
VRK3-220ENST00000600259 CA1P00915 261 aaPredicted RBP4.41□□□□□ -1.7
VRK3-220ENST00000600259 F2RP25116 425 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 FGF9P31371 208 aaPredicted RBP4.41□□□□□ -1.7
VRK3-220ENST00000600259 AQP4P55087 323 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 GNG2P59768 71 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 DEFB131AP59861 70 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 TBCEQ15813 527 aaPredicted RBP4.41□□□□□ -1.7
VRK3-220ENST00000600259 C12orf74Q32Q52 190 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 C22orf42Q6IC83 251 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 DHRS11Q6UWP2 260 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 Q6ZTC4 211 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 TCF24Q7RTU0 167 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 GBGT1Q8N5D6 347 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 OR5H6Q8NGV6 325 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 FCAMRQ8WWV6 532 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 LSM10Q969L4 123 aaKnown RBP4.41□□□□□ -1.7
VRK3-220ENST00000600259 SLC25A38Q96DW6 304 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 RNF126Q9BV68 326 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 SCRT1Q9BWW7 348 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 CCDC90BQ9GZT6 254 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 TMEM14BQ9NUH8 114 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 COMMD9Q9P000 198 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 NSG2Q9Y328 171 aa4.41□□□□□ -1.7
VRK3-220ENST00000600259 LRP1BQ9NZR2 4599 aa4.4□□□□□ -1.7
VRK3-220ENST00000600259 TRAV18A0A075B6X5 111 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 TRAV2A0A0B4J234 112 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 TRAV10A0A0B4J240 114 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 PRSS29PA6NIE9 313 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 MARCH11A6NNE9 402 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 NUPL2O15504 423 aaKnown RBP4.4□□□□□ -1.71
VRK3-220ENST00000600259 CYB5BO43169 146 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 DFFBO76075 338 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 IGHV3-48P01763 117 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 MYL9P24844 172 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 LPAR6P43657 344 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 MFAP4P55083 255 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 CATR1Q13166 79 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 Q56UQ5 140 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 LEMD1Q68G75 181 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 PVRIGQ6DKI7 326 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 TOMM20LQ6UXN7 152 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 Q6ZR54 194 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 ZNF367Q7RTV3 350 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 TRPT1Q86TN4 253 aaKnown RBP4.4□□□□□ -1.71
VRK3-220ENST00000600259 POM121L12Q8N7R1 296 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 DMBX1Q8NFW5 382 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 OR1P1Q8NH06 330 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 OR51H1Q8NH63 302 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 ST8SIA2Q92186 375 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 TXN2Q99757 166 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 MS4A6AQ9H2W1 248 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 AUNIPQ9H7T9 357 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 TXNL4BQ9NX01 149 aaKnown RBP4.4□□□□□ -1.71
VRK3-220ENST00000600259 RHBDL2Q9NX52 303 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 CELA1Q9UNI1 258 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 OR51B2Q9Y5P1 312 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 AGRNO00468 2067 aa4.4□□□□□ -1.71
VRK3-220ENST00000600259 A0A1B0GU03 582 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 K7EQG2 157 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 SCGNO76038 276 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms