RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 SLC25A33Q9BSK2 321 aa18.51■□□□□ 0.55
SYMPK-212ENST00000598896 FAM103A1Q9BTL3 118 aaKnown RBP18.51■□□□□ 0.55
SYMPK-212ENST00000598896 ARV1Q9H2C2 271 aa18.51■□□□□ 0.55
SYMPK-212ENST00000598896 ACANP16112 2415 aa18.51■□□□□ 0.55
SYMPK-212ENST00000598896 BORCS7-ASMTA0A0B4J1R7 106 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 SNCAP37840 140 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 TUSC1Q2TAM9 212 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 ZNF562Q6V9R5 426 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 MXRA5Q9NR99 2828 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 IFNA4P05014 189 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 LY6EQ16553 131 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 C2orf83Q53S99 150 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 C19orf35Q6ZS72 473 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 IL17RELQ6ZVW7 336 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 C5orf56Q8N8D9 126 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 HSD17B11Q8NBQ5 300 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 TMED6Q8WW62 240 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 SSMEM1Q8WWF3 244 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 PINX1Q96BK5 328 aaKnown RBP18.5■□□□□ 0.55
SYMPK-212ENST00000598896 UBQLN2Q9UHD9 624 aa18.5■□□□□ 0.55
SYMPK-212ENST00000598896 CD5LO43866 347 aa18.49■□□□□ 0.55
SYMPK-212ENST00000598896 DFFBO76075 338 aa18.49■□□□□ 0.55
SYMPK-212ENST00000598896 HLA-DRB1P01911 266 aa18.49■□□□□ 0.55
SYMPK-212ENST00000598896 RAB11AP62491 216 aa18.49■□□□□ 0.55
SYMPK-212ENST00000598896 AANATQ16613 207 aa18.49■□□□□ 0.55
SYMPK-212ENST00000598896 FAM74A1Q5RGS3 127 aa18.49■□□□□ 0.55
SYMPK-212ENST00000598896 PHYHIPLQ96FC7 376 aa18.49■□□□□ 0.55
SYMPK-212ENST00000598896 P2RX4Q99571 388 aa18.49■□□□□ 0.55
SYMPK-212ENST00000598896 HSPB9Q9BQS6 159 aa18.49■□□□□ 0.55
SYMPK-212ENST00000598896 IGHV7-81A0A0B4J1V7 117 aa18.48■□□□□ 0.55
SYMPK-212ENST00000598896 A6NDX4 124 aa18.48■□□□□ 0.55
SYMPK-212ENST00000598896 AMY1AP04745 511 aa18.48■□□□□ 0.55
SYMPK-212ENST00000598896 SCARB1Q8WTV0 552 aa18.48■□□□□ 0.55
SYMPK-212ENST00000598896 RASL11BQ9BPW5 248 aa18.48■□□□□ 0.55
SYMPK-212ENST00000598896 GINS3Q9BRX5 216 aa18.48■□□□□ 0.55
SYMPK-212ENST00000598896 SH3BGRL3Q9H299 93 aa18.48■□□□□ 0.55
SYMPK-212ENST00000598896 MOB4Q9Y3A3 225 aa18.48■□□□□ 0.55
SYMPK-212ENST00000598896 UBE2L5PA0A1B0GUS4 154 aa18.48■□□□□ 0.55
SYMPK-212ENST00000598896 SH2D7A6NKC9 451 aaPredicted RBP18.48■□□□□ 0.55
SYMPK-212ENST00000598896 FBXO24O75426 580 aa18.48■□□□□ 0.55
SYMPK-212ENST00000598896 EIF5AP63241 154 aaKnown RBP18.48■□□□□ 0.55
SYMPK-212ENST00000598896 ARPC1AQ92747 370 aa18.48■□□□□ 0.55
SYMPK-212ENST00000598896 ZNF48Q96MX3 618 aaPredicted RBP18.48■□□□□ 0.55
SYMPK-212ENST00000598896 FBXO7Q9Y3I1 522 aa18.48■□□□□ 0.55
SYMPK-212ENST00000598896 RFNGQ9Y644 331 aa18.48■□□□□ 0.55
SYMPK-212ENST00000598896 IGHV4-59P01825 116 aa18.47■□□□□ 0.55
SYMPK-212ENST00000598896 RUNX1Q01196 453 aa18.47■□□□□ 0.55
SYMPK-212ENST00000598896 VWC2Q2TAL6 325 aa18.47■□□□□ 0.55
SYMPK-212ENST00000598896 PCNPQ8WW12 178 aaKnown RBP18.47■□□□□ 0.55
SYMPK-212ENST00000598896 TMEM147Q9BVK8 224 aa18.46■□□□□ 0.55
SYMPK-212ENST00000598896 SCAF4O95104 1147 aaKnown RBP18.46■□□□□ 0.54
SYMPK-212ENST00000598896 MFAP2P55001 183 aa18.46■□□□□ 0.54
SYMPK-212ENST00000598896 ATP5IP56385 69 aaPredicted RBP18.46■□□□□ 0.54
SYMPK-212ENST00000598896 ATP6V1FQ16864 119 aa18.46■□□□□ 0.54
SYMPK-212ENST00000598896 ZNF114Q8NC26 417 aa18.46■□□□□ 0.54
SYMPK-212ENST00000598896 UQCC1Q9NVA1 299 aa18.46■□□□□ 0.54
SYMPK-212ENST00000598896 SPP1P10451 314 aa18.45■□□□□ 0.54
SYMPK-212ENST00000598896 EGR2P11161 476 aaPredicted RBP18.45■□□□□ 0.54
SYMPK-212ENST00000598896 ATP6V0CP27449 155 aa18.45■□□□□ 0.54
SYMPK-212ENST00000598896 IER3P46695 156 aa18.45■□□□□ 0.54
SYMPK-212ENST00000598896 ASPHD1Q5U4P2 390 aa18.45■□□□□ 0.54
SYMPK-212ENST00000598896 MRPL41Q8IXM3 137 aaKnown RBP18.45■□□□□ 0.54
SYMPK-212ENST00000598896 ABHD5Q8WTS1 349 aa18.45■□□□□ 0.54
SYMPK-212ENST00000598896 SRSF8Q9BRL6 282 aaKnown RBP18.45■□□□□ 0.54
SYMPK-212ENST00000598896 SLC25A32Q9H2D1 315 aa18.45■□□□□ 0.54
SYMPK-212ENST00000598896 PLA2G2EQ9NZK7 142 aa18.45■□□□□ 0.54
SYMPK-212ENST00000598896 FGF16O43320 207 aa18.44■□□□□ 0.54
SYMPK-212ENST00000598896 IFNA5P01569 189 aa18.44■□□□□ 0.54
SYMPK-212ENST00000598896 ARSJQ5FYB0 599 aaPredicted RBP18.44■□□□□ 0.54
SYMPK-212ENST00000598896 HSD17B13Q7Z5P4 300 aaPredicted RBP18.44■□□□□ 0.54
SYMPK-212ENST00000598896 WDR61Q9GZS3 305 aaKnown RBP18.44■□□□□ 0.54
SYMPK-212ENST00000598896 DMRT1Q9Y5R6 373 aa18.44■□□□□ 0.54
SYMPK-212ENST00000598896 RPS10-NUDT3A0A1W2PQS6 291 aa18.43■□□□□ 0.54
SYMPK-212ENST00000598896 SONP18583 2426 aaKnown RBP18.43■□□□□ 0.54
SYMPK-212ENST00000598896 LINC01548A6NM66 108 aa18.43■□□□□ 0.54
SYMPK-212ENST00000598896 DLK1P80370 383 aa18.43■□□□□ 0.54
SYMPK-212ENST00000598896 MLANAQ16655 118 aa18.43■□□□□ 0.54
SYMPK-212ENST00000598896 PVRIGQ6DKI7 326 aa18.43■□□□□ 0.54
SYMPK-212ENST00000598896 SLC25A24Q6NUK1 477 aa18.43■□□□□ 0.54
SYMPK-212ENST00000598896 Q6YL49 198 aa18.43■□□□□ 0.54
SYMPK-212ENST00000598896 SPNS3Q6ZMD2 512 aa18.43■□□□□ 0.54
SYMPK-212ENST00000598896 GGACTQ9BVM4 153 aa18.43■□□□□ 0.54
SYMPK-212ENST00000598896 YAE1D1Q9NRH1 226 aa18.43■□□□□ 0.54
SYMPK-212ENST00000598896 PITPNC1Q9UKF7 332 aa18.43■□□□□ 0.54
SYMPK-212ENST00000598896 F11RQ9Y624 299 aaKnown RBP18.43■□□□□ 0.54
SYMPK-212ENST00000598896 CTRB1P17538 263 aa18.42■□□□□ 0.54
SYMPK-212ENST00000598896 MDKP21741 143 aaPredicted RBP18.42■□□□□ 0.54
SYMPK-212ENST00000598896 SUB1P53999 127 aaKnown RBP eCLIP18.42■□□□□ 0.54
SYMPK-212ENST00000598896 CTRB2Q6GPI1 263 aa18.42■□□□□ 0.54
SYMPK-212ENST00000598896 SMR3AQ99954 134 aa18.42■□□□□ 0.54
SYMPK-212ENST00000598896 RSG1Q9BU20 258 aa18.42■□□□□ 0.54
SYMPK-212ENST00000598896 PARD6GQ9BYG4 376 aaPredicted RBP18.42■□□□□ 0.54
SYMPK-212ENST00000598896 SEC11BP0C7V7 166 aa18.41■□□□□ 0.54
SYMPK-212ENST00000598896 OR1P1Q8NH06 330 aa18.41■□□□□ 0.54
SYMPK-212ENST00000598896 TAF15Q92804 592 aaKnown RBP eCLIP18.41■□□□□ 0.54
SYMPK-212ENST00000598896 FNDC4Q9H6D8 234 aaPredicted RBP18.41■□□□□ 0.54
SYMPK-212ENST00000598896 ATP6V0E1O15342 81 aa18.41■□□□□ 0.54
SYMPK-212ENST00000598896 LFNGQ8NES3 379 aa18.41■□□□□ 0.54
SYMPK-212ENST00000598896 PRDM13Q9H4Q3 707 aa18.41■□□□□ 0.54
SYMPK-212ENST00000598896 PARP11Q9NR21 331 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms