RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 TGOLN2O43493 480 aa12.66□□□□□ -0.38
PNKP-210ENST00000597965 TNFSF12O43508 249 aa12.66□□□□□ -0.38
PNKP-210ENST00000597965 IL7P13232 177 aa12.66□□□□□ -0.38
PNKP-210ENST00000597965 IL18Q14116 193 aa12.66□□□□□ -0.38
PNKP-210ENST00000597965 UBE2NLQ5JXB2 153 aa12.66□□□□□ -0.38
PNKP-210ENST00000597965 DMBX1Q8NFW5 382 aa12.66□□□□□ -0.38
PNKP-210ENST00000597965 TMEM190Q8WZ59 177 aa12.66□□□□□ -0.38
PNKP-210ENST00000597965 SLC25A38Q96DW6 304 aa12.66□□□□□ -0.38
PNKP-210ENST00000597965 PLEKHA2Q9HB19 425 aa12.66□□□□□ -0.38
PNKP-210ENST00000597965 CCL28Q9NRJ3 127 aa12.66□□□□□ -0.38
PNKP-210ENST00000597965 ALMS1Q8TCU4 4167 aa12.66□□□□□ -0.38
PNKP-210ENST00000597965 A0A0A6YYH2 397 aa12.65□□□□□ -0.38
PNKP-210ENST00000597965 IGLC7A0M8Q6 106 aa12.65□□□□□ -0.38
PNKP-210ENST00000597965 A6NJ64 397 aa12.65□□□□□ -0.38
PNKP-210ENST00000597965 UPK2O00526 184 aa12.65□□□□□ -0.38
PNKP-210ENST00000597965 PPYP01298 95 aa12.65□□□□□ -0.38
PNKP-210ENST00000597965 CMC4P56277 68 aaPredicted RBP12.65□□□□□ -0.38
PNKP-210ENST00000597965 DEFB135Q30KP9 77 aa12.65□□□□□ -0.38
PNKP-210ENST00000597965 TBC1D24Q9ULP9 559 aa12.65□□□□□ -0.38
PNKP-210ENST00000597965 SELENOKQ9Y6D0 94 aa12.65□□□□□ -0.38
PNKP-210ENST00000597965 CGB1A6NKQ9 187 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 SULT1C2O00338 296 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 NDUFA4O00483 81 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 SSX5O60225 188 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 TRAPPC2P0DI81 140 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 TRAPPC2BP0DI82 140 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 ERVK-16P61578 105 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 TRIM16LQ309B1 348 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 RNF183Q96D59 192 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 GALNT14Q96FL9 552 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 ABHD1Q96SE0 405 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 SLC5A7Q9GZV3 580 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 TMEM140Q9NV12 185 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 RHBDL2Q9NX52 303 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 COMMD9Q9P000 198 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 RABL2AQ9UBK7 228 aaPredicted RBP12.64□□□□□ -0.39
PNKP-210ENST00000597965 RABL2BQ9UNT1 228 aa12.64□□□□□ -0.39
PNKP-210ENST00000597965 PLECQ15149 4684 aaKnown RBP12.64□□□□□ -0.39
PNKP-210ENST00000597965 K7EMT4 169 aa12.63□□□□□ -0.39
PNKP-210ENST00000597965 SERPINE2P07093 398 aa12.63□□□□□ -0.39
PNKP-210ENST00000597965 CBX5P45973 191 aa12.63□□□□□ -0.39
PNKP-210ENST00000597965 DEFA1P59665 94 aa12.63□□□□□ -0.39
PNKP-210ENST00000597965 DEFA3P59666 94 aa12.63□□□□□ -0.39
PNKP-210ENST00000597965 SLC25A24Q6NUK1 477 aa12.63□□□□□ -0.39
PNKP-210ENST00000597965 HOGA1Q86XE5 327 aa12.63□□□□□ -0.39
PNKP-210ENST00000597965 IGHV3-35A0A0C4DH35 117 aa12.62□□□□□ -0.39
PNKP-210ENST00000597965 OR2T8A6NH00 312 aa12.62□□□□□ -0.39
PNKP-210ENST00000597965 CTDSPLO15194 276 aa12.62□□□□□ -0.39
PNKP-210ENST00000597965 PTTG1O95997 202 aa12.62□□□□□ -0.39
PNKP-210ENST00000597965 OR13C7P0DN81 318 aa12.62□□□□□ -0.39
PNKP-210ENST00000597965 ASAH1Q13510 395 aa12.62□□□□□ -0.39
PNKP-210ENST00000597965 AADACL3Q5VUY0 350 aa12.62□□□□□ -0.39
PNKP-210ENST00000597965 OR1L8Q8NGR8 309 aa12.62□□□□□ -0.39
PNKP-210ENST00000597965 GIMAP1Q8WWP7 306 aa12.62□□□□□ -0.39
PNKP-210ENST00000597965 LSM10Q969L4 123 aaKnown RBP12.62□□□□□ -0.39
PNKP-210ENST00000597965 S100A16Q96FQ6 103 aaKnown RBP12.62□□□□□ -0.39
PNKP-210ENST00000597965 GPHA2Q96T91 129 aa12.62□□□□□ -0.39
PNKP-210ENST00000597965 DIABLOQ9NR28 239 aa12.62□□□□□ -0.39
PNKP-210ENST00000597965 UBQLN2Q9UHD9 624 aa12.62□□□□□ -0.39
PNKP-210ENST00000597965 TRAV18A0A075B6X5 111 aa12.61□□□□□ -0.39
PNKP-210ENST00000597965 C15orf62A8K5M9 175 aa12.61□□□□□ -0.39
PNKP-210ENST00000597965 PLA2G10O15496 165 aa12.61□□□□□ -0.39
PNKP-210ENST00000597965 FXYD4P59646 89 aa12.61□□□□□ -0.39
PNKP-210ENST00000597965 HERV-K104P61576 105 aa12.61□□□□□ -0.39
PNKP-210ENST00000597965 CADM3Q8N126 398 aa12.61□□□□□ -0.39
PNKP-210ENST00000597965 OR51H1Q8NH63 302 aa12.61□□□□□ -0.39
PNKP-210ENST00000597965 C20orf24Q9BUV8 137 aa12.61□□□□□ -0.39
PNKP-210ENST00000597965 MFFQ9GZY8 342 aa12.61□□□□□ -0.39
PNKP-210ENST00000597965 FKBP11Q9NYL4 201 aa12.61□□□□□ -0.39
PNKP-210ENST00000597965 C21orf62Q9NYP8 219 aa12.61□□□□□ -0.39
PNKP-210ENST00000597965 MARCH11A6NNE9 402 aa12.6□□□□□ -0.39
PNKP-210ENST00000597965 GSTZ1O43708 216 aaPredicted RBP12.6□□□□□ -0.39
PNKP-210ENST00000597965 SNAPC5O75971 98 aa12.6□□□□□ -0.39
PNKP-210ENST00000597965 RELQ04864 619 aaPredicted RBP12.6□□□□□ -0.39
PNKP-210ENST00000597965 ZNF818PQ6ZRF7 136 aa12.6□□□□□ -0.39
PNKP-210ENST00000597965 OR5AP2Q8NGF4 316 aa12.6□□□□□ -0.39
PNKP-210ENST00000597965 OR10W1Q8NGF6 305 aa12.6□□□□□ -0.39
PNKP-210ENST00000597965 GATAD1Q8WUU5 269 aa12.6□□□□□ -0.39
PNKP-210ENST00000597965 TMEM56Q96MV1 263 aa12.6□□□□□ -0.39
PNKP-210ENST00000597965 MAP6D1Q9H9H5 199 aa12.6□□□□□ -0.39
PNKP-210ENST00000597965 F11RQ9Y624 299 aaKnown RBP12.6□□□□□ -0.39
PNKP-210ENST00000597965 hCG_2014768A0A024R1R8 64 aa12.59□□□□□ -0.39
PNKP-210ENST00000597965 TRAV3A0A0B4J244 114 aa12.59□□□□□ -0.39
PNKP-210ENST00000597965 CD5P06127 495 aa12.59□□□□□ -0.39
PNKP-210ENST00000597965 RPA2P15927 270 aa12.59□□□□□ -0.39
PNKP-210ENST00000597965 RFX2P48378 723 aa12.59□□□□□ -0.39
PNKP-210ENST00000597965 ODF3L2Q3SX64 289 aa12.59□□□□□ -0.39
PNKP-210ENST00000597965 TRIQKQ629K1 86 aa12.59□□□□□ -0.39
PNKP-210ENST00000597965 LGALS9CQ6DKI2 356 aa12.59□□□□□ -0.39
PNKP-210ENST00000597965 CMTM1Q8IZ96 169 aa12.59□□□□□ -0.39
PNKP-210ENST00000597965 GVQW1Q8N7I0 195 aa12.59□□□□□ -0.39
PNKP-210ENST00000597965 TRIM63Q969Q1 353 aa12.59□□□□□ -0.39
PNKP-210ENST00000597965 TEX50A0A1B0GTY4 177 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 LINC00854A0A1B0GVQ3 168 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 MPTX1A8MV57 137 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 NUPL2O15504 423 aaKnown RBP12.58□□□□□ -0.4
PNKP-210ENST00000597965 XRCC3O43542 346 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 S1PR2O95136 353 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 F2RP25116 425 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 EWSR1Q01844 656 aaKnown RBP eCLIP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms