RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 MUC21Q5SSG8 566 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 TGIF2LXQ8IUE1 241 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 ZBTB34Q8NCN2 500 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 EGLN1Q9GZT9 426 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 MRPL18Q9H0U6 180 aaKnown RBP10.24□□□□□ -0.77
USHBP1-207ENST00000597928 ZZEF1O43149 2961 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 SETD2Q9BYW2 2564 aaPredicted RBP10.24□□□□□ -0.77
USHBP1-207ENST00000597928 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.24□□□□□ -0.77
USHBP1-207ENST00000597928 SS18L1O75177 396 aaPredicted RBP10.24□□□□□ -0.77
USHBP1-207ENST00000597928 LINC00869P0C866 280 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 CEACAM1P13688 526 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 ADMP35318 185 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 HSPE1P61604 102 aaKnown RBP10.24□□□□□ -0.77
USHBP1-207ENST00000597928 CENPWQ5EE01 88 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 ZNF474Q6S9Z5 364 aaPredicted RBP10.24□□□□□ -0.77
USHBP1-207ENST00000597928 TMEM183AQ8IXX5 376 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 OR5AU1Q8NGC0 362 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 OR2D3Q8NGH3 330 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 NEUROG1Q92886 237 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 PPIHO43447 177 aaKnown RBP10.24□□□□□ -0.77
USHBP1-207ENST00000597928 PKIAP61925 76 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 GNG5P63218 68 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 RNASEKQ6P5S7 137 aaKnown RBP10.24□□□□□ -0.77
USHBP1-207ENST00000597928 Q6ZSR3 168 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 ERASQ7Z444 233 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 TMEM68Q96MH6 324 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 MRPL20Q9BYC9 149 aaKnown RBP10.24□□□□□ -0.77
USHBP1-207ENST00000597928 WNT10AQ9GZT5 417 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 HES4Q9HCC6 221 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 HCFC1P51610 2035 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 TMSB15BA0A087X1C1 80 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 SLC25A5P05141 298 aaKnown RBP10.23□□□□□ -0.77
USHBP1-207ENST00000597928 TDGF1P13385 188 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 HIST1H1BP16401 226 aaKnown RBP10.23□□□□□ -0.77
USHBP1-207ENST00000597928 CASP6P55212 293 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 BRWD1-AS2P59051 145 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 DIAPH2-AS1Q14236 149 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 LINC01551Q86U37 167 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 DMRTC2Q8IXT2 367 aaPredicted RBP10.23□□□□□ -0.77
USHBP1-207ENST00000597928 ST6GALNAC3Q8NDV1 305 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 IER2Q9BTL4 223 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 GGTLC1Q9BX51 225 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 C11orf1Q9H5F2 150 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 AKAP13Q12802 2813 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 VSTM5A8MXK1 200 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 FAM90A26D6RGX4 464 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 NDUFB3O43676 98 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 EFNB3Q15768 340 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 OR5B3Q8NH48 314 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 ANAPC16Q96DE5 110 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 SSBP4Q9BWG4 385 aaPredicted RBP10.23□□□□□ -0.77
USHBP1-207ENST00000597928 SEBOXQ9HB31 216 aaPredicted RBP10.23□□□□□ -0.77
USHBP1-207ENST00000597928 ZNF355PQ9NSJ1 428 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 ACACBO00763 2458 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 PDE6DO43924 150 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 RND2P52198 227 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 MFAP2P55001 183 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 FOXA3P55318 350 aaPredicted RBP10.23□□□□□ -0.77
USHBP1-207ENST00000597928 TMEM108Q6UXF1 575 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 C22orf34Q6ZV56 151 aa10.23□□□□□ -0.77
USHBP1-207ENST00000597928 hADV38S2A0JD32 116 aa10.22□□□□□ -0.77
USHBP1-207ENST00000597928 ZNF729A6NN14 1252 aaPredicted RBP10.22□□□□□ -0.77
USHBP1-207ENST00000597928 TMEM250H0YL14 139 aa10.22□□□□□ -0.77
USHBP1-207ENST00000597928 LYZP61626 148 aa10.22□□□□□ -0.77
USHBP1-207ENST00000597928 RPL19P84098 196 aaKnown RBP10.22□□□□□ -0.77
USHBP1-207ENST00000597928 Q6ZS49 121 aa10.22□□□□□ -0.77
USHBP1-207ENST00000597928 DAZAP1Q96EP5 407 aaKnown RBP10.22□□□□□ -0.77
USHBP1-207ENST00000597928 EAF1Q96JC9 268 aaPredicted RBP10.22□□□□□ -0.77
USHBP1-207ENST00000597928 WDR83OSQ9Y284 106 aa10.22□□□□□ -0.77
USHBP1-207ENST00000597928 HILPDAQ9Y5L2 63 aa10.22□□□□□ -0.77
USHBP1-207ENST00000597928 IQCJQ1A5X6 159 aa10.22□□□□□ -0.77
USHBP1-207ENST00000597928 RPEL1Q2QD12 228 aa10.22□□□□□ -0.77
USHBP1-207ENST00000597928 MMD2Q8IY49 270 aa10.22□□□□□ -0.77
USHBP1-207ENST00000597928 ONECUT1Q9UBC0 465 aa10.22□□□□□ -0.77
USHBP1-207ENST00000597928 SELENOKQ9Y6D0 94 aa10.22□□□□□ -0.77
USHBP1-207ENST00000597928 TNRC6AQ8NDV7 1962 aaKnown RBP10.22□□□□□ -0.77
USHBP1-207ENST00000597928 F2Z2F3 143 aa10.21□□□□□ -0.77
USHBP1-207ENST00000597928 TGOLN2O43493 480 aa10.21□□□□□ -0.77
USHBP1-207ENST00000597928 NUPR1O60356 82 aa10.21□□□□□ -0.77
USHBP1-207ENST00000597928 PROP1O75360 226 aa10.21□□□□□ -0.77
USHBP1-207ENST00000597928 ZNF664Q8N3J9 261 aa10.21□□□□□ -0.77
USHBP1-207ENST00000597928 C14orf144Q96I85 54 aa10.21□□□□□ -0.77
USHBP1-207ENST00000597928 GP6Q9HCN6 339 aa10.21□□□□□ -0.77
USHBP1-207ENST00000597928 GFRA3O60609 400 aa10.21□□□□□ -0.77
USHBP1-207ENST00000597928 SERF1AO75920 110 aa10.21□□□□□ -0.77
USHBP1-207ENST00000597928 SAA1P0DJI8 122 aaPredicted RBP10.21□□□□□ -0.77
USHBP1-207ENST00000597928 RAB7AP51149 207 aa10.21□□□□□ -0.77
USHBP1-207ENST00000597928 ARSJQ5FYB0 599 aaPredicted RBP10.21□□□□□ -0.77
USHBP1-207ENST00000597928 Q8NFD4 153 aa10.21□□□□□ -0.77
USHBP1-207ENST00000597928 LINC01560Q8TB33 94 aa10.21□□□□□ -0.77
USHBP1-207ENST00000597928 DYSFO75923 2080 aa10.21□□□□□ -0.78
USHBP1-207ENST00000597928 MKRN2OSH3BPM6 223 aa10.21□□□□□ -0.78
USHBP1-207ENST00000597928 PFN1P07737 140 aaKnown RBP10.21□□□□□ -0.78
USHBP1-207ENST00000597928 GZMBP10144 247 aa10.21□□□□□ -0.78
USHBP1-207ENST00000597928 PTPN13Q12923 2485 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 A6NNC1 897 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 AHRRA9YTQ3 701 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 ZNF25P17030 456 aaPredicted RBP10.2□□□□□ -0.78
USHBP1-207ENST00000597928 SRIP30626 198 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 BORCS7Q96B45 105 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms