RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 C12orf74Q32Q52 190 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 C1orf134Q5TEV5 83 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 LAIR2Q6ISS4 152 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 CNIH2Q6PI25 160 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 ZNF773Q6PK81 442 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 Q6ZRM9 215 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 C8orf59Q8N0T1 100 aaPredicted RBP7.3□□□□□ -1.24
TRIM28-210ENST00000597618 DHRSXQ8N5I4 330 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 GIMAP1Q8WWP7 306 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 LSM10Q969L4 123 aaKnown RBP7.3□□□□□ -1.24
TRIM28-210ENST00000597618 GPHA2Q96T91 129 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 GINS3Q9BRX5 216 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 DCSTAMPQ9H295 470 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 MS4A6AQ9H2W1 248 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 TMEM140Q9NV12 185 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 TBC1D24Q9ULP9 559 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 CELA1Q9UNI1 258 aa7.3□□□□□ -1.24
TRIM28-210ENST00000597618 IGHV3OR16-13A0A075B7E8 117 aa7.29□□□□□ -1.24
TRIM28-210ENST00000597618 IGHV3-74A0A0B4J1X5 117 aa7.29□□□□□ -1.24
TRIM28-210ENST00000597618 TNFSF12O43508 249 aa7.29□□□□□ -1.24
TRIM28-210ENST00000597618 HPRT1P00492 218 aa7.29□□□□□ -1.24
TRIM28-210ENST00000597618 C4BPBP20851 252 aa7.29□□□□□ -1.24
TRIM28-210ENST00000597618 NPY1RP25929 384 aa7.29□□□□□ -1.24
TRIM28-210ENST00000597618 RPS25P62851 125 aaKnown RBP7.29□□□□□ -1.24
TRIM28-210ENST00000597618 CATR1Q13166 79 aa7.29□□□□□ -1.24
TRIM28-210ENST00000597618 ZNF767PQ75MW2 155 aa7.29□□□□□ -1.24
TRIM28-210ENST00000597618 TRPT1Q86TN4 253 aaKnown RBP7.29□□□□□ -1.24
TRIM28-210ENST00000597618 Q8N1X5 172 aa7.29□□□□□ -1.24
TRIM28-210ENST00000597618 DMBX1Q8NFW5 382 aa7.29□□□□□ -1.24
TRIM28-210ENST00000597618 OR1L8Q8NGR8 309 aa7.29□□□□□ -1.24
TRIM28-210ENST00000597618 ZNF414Q96IQ9 312 aa7.29□□□□□ -1.24
TRIM28-210ENST00000597618 C8orf4Q9NR00 106 aa7.29□□□□□ -1.24
TRIM28-210ENST00000597618 TMEM14BQ9NUH8 114 aa7.29□□□□□ -1.24
TRIM28-210ENST00000597618 SULT1C2O00338 296 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 ST8SIA3O43173 380 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 GNAO1P09471 354 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 ERVK-16P61578 105 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 RPL11P62913 178 aaKnown RBP7.28□□□□□ -1.24
TRIM28-210ENST00000597618 HACD4Q5VWC8 232 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 PACRGLQ8N7B6 248 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 ZBTB34Q8NCN2 500 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 DUSP18Q8NEJ0 188 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 SECTM1Q8WVN6 248 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 ST8SIA2Q92186 375 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 FAM210BQ96KR6 192 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 SCRT1Q9BWW7 348 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 HINT2Q9BX68 163 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 NXF2Q9GZY0 626 aaKnown RBP7.28□□□□□ -1.24
TRIM28-210ENST00000597618 VSIRQ9H7M9 311 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 PLEKHA2Q9HB19 425 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 NDUFA4L2Q9NRX3 87 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 ANXA10Q9UJ72 324 aa7.28□□□□□ -1.24
TRIM28-210ENST00000597618 ELF5Q9UKW6 265 aaPredicted RBP7.28□□□□□ -1.24
TRIM28-210ENST00000597618 TEX50A0A1B0GTY4 177 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 IFITM5A6NNB3 132 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 PDCD5O14737 125 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 MFAP4P55083 255 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 ARPC4P59998 168 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 RNF212Q495C1 297 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 CDNFQ49AH0 187 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 FAM24BQ8N5W8 94 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 OR13F1Q8NGS4 319 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 OR1P1Q8NH06 330 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 NUDCD2Q8WVJ2 157 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 TXN2Q99757 166 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 ATG5Q9H1Y0 275 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 CCL28Q9NRJ3 127 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 CLEC5AQ9NY25 188 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 COMMD9Q9P000 198 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 RABAC1Q9UI14 185 aa7.27□□□□□ -1.25
TRIM28-210ENST00000597618 HSMCR30P0CW71 290 aa7.26□□□□□ -1.25
TRIM28-210ENST00000597618 FABP5Q01469 135 aa7.26□□□□□ -1.25
TRIM28-210ENST00000597618 RCN1Q15293 331 aa7.26□□□□□ -1.25
TRIM28-210ENST00000597618 UBE2UQ5VVX9 321 aa7.26□□□□□ -1.25
TRIM28-210ENST00000597618 CSNK1G2-AS1Q8NCQ2 148 aa7.26□□□□□ -1.25
TRIM28-210ENST00000597618 SLC25A46Q96AG3 418 aa7.26□□□□□ -1.25
TRIM28-210ENST00000597618 GRAMD2BQ96HH9 432 aa7.26□□□□□ -1.25
TRIM28-210ENST00000597618 CCDC90BQ9GZT6 254 aa7.26□□□□□ -1.25
TRIM28-210ENST00000597618 TMEM231Q9H6L2 316 aa7.26□□□□□ -1.25
TRIM28-210ENST00000597618 ACOT13Q9NPJ3 140 aa7.26□□□□□ -1.25
TRIM28-210ENST00000597618 SCRT2Q9NQ03 307 aa7.26□□□□□ -1.25
TRIM28-210ENST00000597618 OR51B2Q9Y5P1 312 aa7.26□□□□□ -1.25
TRIM28-210ENST00000597618 IGHV3-66A0A0C4DH42 116 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 TMEM235A6NFC5 223 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 MARCH11A6NNE9 402 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 KNCNA6PVL3 124 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 PTGES3LE9PB15 166 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 I3L2K1 104 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 GNG7O60262 68 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 PPYP01298 95 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 APOHP02749 345 aaPredicted RBP7.25□□□□□ -1.25
TRIM28-210ENST00000597618 FCGR2CP31995 323 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 OR10A3P58181 314 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 GNG2P59768 71 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 ACTL10Q5JWF8 245 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 AADACL3Q5VUY0 350 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 ZNF367Q7RTV3 350 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 LILRB2Q8N423 598 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 OR51H1Q8NH63 302 aa7.25□□□□□ -1.25
TRIM28-210ENST00000597618 MISP3Q96FF7 219 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms