RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 GP9P14770 177 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 SPNP16150 400 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 AKR1C4P17516 323 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 BTCP35070 178 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 INPP1P49441 399 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 CCR6P51684 374 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 AKR1C2P52895 323 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 TMEM187Q14656 261 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 KLK9Q2XQG4 91 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 ZNF343Q6P1L6 599 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 ACSM6Q6P461 480 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 TMED4Q7Z7H5 227 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 FAM223AQ8IWN6 122 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 SELENOHQ8IZQ5 122 aaKnown RBP12.18□□□□□ -0.46
USHBP1-206ENST00000596436 OR5B3Q8NH48 314 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 GALNT14Q96FL9 552 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 USMG5Q96IX5 58 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 SCGB3A2Q96PL1 93 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 TM2D3Q9BRN9 247 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 BATF3Q9NR55 127 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 PTTG2Q9NZH5 202 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 KLK9Q9UKQ9 250 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 IGLV11-55A0A075B6I3 123 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 A0A0B4J293 547 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 SAP30O75446 220 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 NDUFB8O95169 186 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 HSPB1P04792 205 aaKnown RBP12.17□□□□□ -0.46
USHBP1-206ENST00000596436 DHODHQ02127 395 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 EXOSC2Q13868 293 aaKnown RBP12.17□□□□□ -0.46
USHBP1-206ENST00000596436 TMEM268Q5VZI3 342 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 THOC7Q6I9Y2 204 aaKnown RBP12.17□□□□□ -0.46
USHBP1-206ENST00000596436 Q6ZRM9 215 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 LINC00299Q6ZSB3 139 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 SGPP2Q8IWX5 399 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 NECAP1Q8NC96 275 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 OR4A16Q8NH70 328 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 LSM10Q969L4 123 aaKnown RBP12.17□□□□□ -0.46
USHBP1-206ENST00000596436 EDA2RQ9HAV5 297 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 FKBP11Q9NYL4 201 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 FBXL7Q9UJT9 491 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 HYDINQ4G0P3 5121 aa12.17□□□□□ -0.46
USHBP1-206ENST00000596436 OR13C7P0DN81 318 aa12.16□□□□□ -0.46
USHBP1-206ENST00000596436 MFAP2P55001 183 aa12.16□□□□□ -0.46
USHBP1-206ENST00000596436 PRCDQ00LT1 54 aa12.16□□□□□ -0.46
USHBP1-206ENST00000596436 ATP5G2Q06055 141 aa12.16□□□□□ -0.46
USHBP1-206ENST00000596436 C15orf32Q32M92 178 aa12.16□□□□□ -0.46
USHBP1-206ENST00000596436 RBPMSQ93062 196 aaKnown RBP12.16□□□□□ -0.46
USHBP1-206ENST00000596436 TMEM56Q96MV1 263 aa12.16□□□□□ -0.46
USHBP1-206ENST00000596436 SLC25A21Q9BQT8 299 aaPredicted RBP12.16□□□□□ -0.46
USHBP1-206ENST00000596436 ZMAT4Q9H898 229 aa12.16□□□□□ -0.46
USHBP1-206ENST00000596436 S4R3C0 116 aa12.16□□□□□ -0.46
USHBP1-206ENST00000596436 TMEM56-RWDD3S4R434 201 aa12.16□□□□□ -0.46
USHBP1-206ENST00000596436 NAP1L6A6NFF2 107 aa12.15□□□□□ -0.46
USHBP1-206ENST00000596436 A8MZ25 164 aa12.15□□□□□ -0.46
USHBP1-206ENST00000596436 PLA2G10O15496 165 aa12.15□□□□□ -0.46
USHBP1-206ENST00000596436 ST8SIA3O43173 380 aa12.15□□□□□ -0.46
USHBP1-206ENST00000596436 ATG12O94817 140 aa12.15□□□□□ -0.46
USHBP1-206ENST00000596436 NDUFB6O95139 128 aa12.15□□□□□ -0.46
USHBP1-206ENST00000596436 HSPE1P61604 102 aaKnown RBP12.15□□□□□ -0.46
USHBP1-206ENST00000596436 PLECQ15149 4684 aaKnown RBP12.15□□□□□ -0.46
USHBP1-206ENST00000596436 RBMS2Q15434 407 aaKnown RBP12.15□□□□□ -0.46
USHBP1-206ENST00000596436 SPINK9Q5DT21 86 aa12.15□□□□□ -0.46
USHBP1-206ENST00000596436 HSD17B13Q7Z5P4 300 aaPredicted RBP12.15□□□□□ -0.46
USHBP1-206ENST00000596436 Q8N1Y9 231 aa12.15□□□□□ -0.46
USHBP1-206ENST00000596436 SLC35G3Q8N808 338 aa12.15□□□□□ -0.46
USHBP1-206ENST00000596436 RNASE11Q8TAA1 199 aaKnown RBP12.15□□□□□ -0.46
USHBP1-206ENST00000596436 GPR146Q96CH1 333 aa12.15□□□□□ -0.46
USHBP1-206ENST00000596436 GAR1Q9NY12 217 aaKnown RBP12.15□□□□□ -0.46
USHBP1-206ENST00000596436 PEF1Q9UBV8 284 aaKnown RBP12.15□□□□□ -0.46
USHBP1-206ENST00000596436 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.14□□□□□ -0.47
USHBP1-206ENST00000596436 MFSD2BA6NFX1 497 aa12.14□□□□□ -0.47
USHBP1-206ENST00000596436 DHFRP00374 187 aa12.14□□□□□ -0.47
USHBP1-206ENST00000596436 IGHV3-23P01764 117 aa12.14□□□□□ -0.47
USHBP1-206ENST00000596436 DEFA4P12838 97 aa12.14□□□□□ -0.47
USHBP1-206ENST00000596436 HIST1H1BP16401 226 aaKnown RBP12.14□□□□□ -0.47
USHBP1-206ENST00000596436 MECP2P51608 486 aaKnown RBP12.14□□□□□ -0.47
USHBP1-206ENST00000596436 IL22RA2Q969J5 263 aa12.14□□□□□ -0.47
USHBP1-206ENST00000596436 RRNAD1Q96FB5 475 aaKnown RBP12.14□□□□□ -0.47
USHBP1-206ENST00000596436 CCDC140Q96MF4 163 aa12.14□□□□□ -0.47
USHBP1-206ENST00000596436 RANGRFQ9HD47 186 aaPredicted RBP12.14□□□□□ -0.47
USHBP1-206ENST00000596436 C19orf73Q9NVV2 129 aa12.14□□□□□ -0.47
USHBP1-206ENST00000596436 FLVCR2Q9UPI3 526 aa12.14□□□□□ -0.47
USHBP1-206ENST00000596436 KCNIP3Q9Y2W7 256 aa12.14□□□□□ -0.47
USHBP1-206ENST00000596436 F11RQ9Y624 299 aaKnown RBP12.14□□□□□ -0.47
USHBP1-206ENST00000596436 BMPR1BO00238 502 aa12.13□□□□□ -0.47
USHBP1-206ENST00000596436 PPP1R1AQ13522 171 aa12.13□□□□□ -0.47
USHBP1-206ENST00000596436 ANKRD55Q3KP44 614 aa12.13□□□□□ -0.47
USHBP1-206ENST00000596436 TMEM128Q5BJH2 165 aa12.13□□□□□ -0.47
USHBP1-206ENST00000596436 FAM219AQ8IW50 185 aa12.13□□□□□ -0.47
USHBP1-206ENST00000596436 CENPSQ8N2Z9 138 aa12.13□□□□□ -0.47
USHBP1-206ENST00000596436 OR2C3Q8N628 320 aa12.13□□□□□ -0.47
USHBP1-206ENST00000596436 C7orf50Q9BRJ6 194 aaKnown RBP12.13□□□□□ -0.47
USHBP1-206ENST00000596436 CCDC32Q9BV29 185 aa12.13□□□□□ -0.47
USHBP1-206ENST00000596436 PALMDQ9NP74 551 aa12.13□□□□□ -0.47
USHBP1-206ENST00000596436 CACNG5Q9UF02 275 aa12.13□□□□□ -0.47
USHBP1-206ENST00000596436 PPP5D1E7EU14 171 aa12.12□□□□□ -0.47
USHBP1-206ENST00000596436 IGLV1-51P01701 117 aa12.12□□□□□ -0.47
USHBP1-206ENST00000596436 AARDQ4LEZ3 155 aa12.12□□□□□ -0.47
USHBP1-206ENST00000596436 NMSQ5H8A3 153 aa12.12□□□□□ -0.47
USHBP1-206ENST00000596436 LYZL2Q7Z4W2 148 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms