RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 HIST1H1BP16401 226 aaKnown RBP8.5□□□□□ -1.05
VRK3-210ENST00000596121 AKR1C4P17516 323 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 ZP3P21754 424 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 CCR6P51684 374 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 AKR1C2P52895 323 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 AP3S2P59780 193 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 PRCDQ00LT1 54 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 DHODHQ02127 395 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 TMEM268Q5VZI3 342 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 ZNF57Q68EA5 555 aaPredicted RBP8.5□□□□□ -1.05
VRK3-210ENST00000596121 THOC7Q6I9Y2 204 aaKnown RBP8.5□□□□□ -1.05
VRK3-210ENST00000596121 C11orf87Q6NUJ2 197 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 CLEC19AQ6UXS0 136 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 REC114Q7Z4M0 266 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 ZNF429Q86V71 674 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 OR2C3Q8N628 320 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 OR9G4Q8NGQ1 327 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 ZNF502Q8TBZ5 544 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 MRAPQ8TCY5 172 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 GALNT14Q96FL9 552 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 ZNF414Q96IQ9 312 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 PRR25Q96S07 402 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 ZC4H2Q9NQZ6 224 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 FKBP11Q9NYL4 201 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 SORL1Q92673 2214 aa8.5□□□□□ -1.05
VRK3-210ENST00000596121 K7EIM0 57 aa8.49□□□□□ -1.05
VRK3-210ENST00000596121 DHFRP00374 187 aa8.49□□□□□ -1.05
VRK3-210ENST00000596121 CLEC3BP05452 202 aa8.49□□□□□ -1.05
VRK3-210ENST00000596121 IL7P13232 177 aa8.49□□□□□ -1.05
VRK3-210ENST00000596121 BTCP35070 178 aa8.49□□□□□ -1.05
VRK3-210ENST00000596121 RPEL1Q2QD12 228 aa8.49□□□□□ -1.05
VRK3-210ENST00000596121 AARDQ4LEZ3 155 aa8.49□□□□□ -1.05
VRK3-210ENST00000596121 SLC25A24Q6NUK1 477 aa8.49□□□□□ -1.05
VRK3-210ENST00000596121 HSD17B13Q7Z5P4 300 aaPredicted RBP8.49□□□□□ -1.05
VRK3-210ENST00000596121 SGPP2Q8IWX5 399 aa8.49□□□□□ -1.05
VRK3-210ENST00000596121 RBPMSQ93062 196 aaKnown RBP8.49□□□□□ -1.05
VRK3-210ENST00000596121 PLA2G10O15496 165 aa8.48□□□□□ -1.05
VRK3-210ENST00000596121 SPNP16150 400 aa8.48□□□□□ -1.05
VRK3-210ENST00000596121 FAUP35544 74 aaKnown RBP8.48□□□□□ -1.05
VRK3-210ENST00000596121 ARL3P36405 182 aa8.48□□□□□ -1.05
VRK3-210ENST00000596121 INSL3P51460 131 aa8.48□□□□□ -1.05
VRK3-210ENST00000596121 MECP2P51608 486 aaKnown RBP8.48□□□□□ -1.05
VRK3-210ENST00000596121 ANKRD55Q3KP44 614 aa8.48□□□□□ -1.05
VRK3-210ENST00000596121 PVRIGQ6DKI7 326 aa8.48□□□□□ -1.05
VRK3-210ENST00000596121 LYZL2Q7Z4W2 148 aa8.48□□□□□ -1.05
VRK3-210ENST00000596121 TMED4Q7Z7H5 227 aa8.48□□□□□ -1.05
VRK3-210ENST00000596121 SLC35G3Q8N808 338 aa8.48□□□□□ -1.05
VRK3-210ENST00000596121 OR1P1Q8NH06 330 aa8.48□□□□□ -1.05
VRK3-210ENST00000596121 SCARB1Q8WTV0 552 aa8.48□□□□□ -1.05
VRK3-210ENST00000596121 EEF1AKMT3Q96AZ1 226 aa8.48□□□□□ -1.05
VRK3-210ENST00000596121 RRNAD1Q96FB5 475 aaKnown RBP8.48□□□□□ -1.05
VRK3-210ENST00000596121 SCGB3A2Q96PL1 93 aa8.48□□□□□ -1.05
VRK3-210ENST00000596121 FLVCR2Q9UPI3 526 aa8.48□□□□□ -1.05
VRK3-210ENST00000596121 LSM4Q9Y4Z0 139 aaKnown RBP8.48□□□□□ -1.05
VRK3-210ENST00000596121 TRBV7-1A0A0A6YYK4 115 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 IZUMO1RA6ND01 250 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 I3L2K1 104 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 GGCTO75223 188 aaKnown RBP8.47□□□□□ -1.05
VRK3-210ENST00000596121 ATG12O94817 140 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 IGLV1-51P01701 117 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 IGHV3-48P01763 117 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 GPR183P32249 361 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 NMSQ5H8A3 153 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 TRIQKQ629K1 86 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 GPHB5Q86YW7 130 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 FAM219AQ8IW50 185 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 ZNF114Q8NC26 417 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 VN1R17PQ8TDU5 208 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 DEDD2Q8WXF8 326 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 IL22RA2Q969J5 263 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 CXorf58Q96LI9 332 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 OR4C12Q96R67 309 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 SLC25A21Q9BQT8 299 aaPredicted RBP8.47□□□□□ -1.05
VRK3-210ENST00000596121 CHRDL1Q9BU40 450 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 CACNG5Q9UF02 275 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 ZNF256Q9Y2P7 627 aaPredicted RBP8.47□□□□□ -1.05
VRK3-210ENST00000596121 KCNIP3Q9Y2W7 256 aa8.47□□□□□ -1.05
VRK3-210ENST00000596121 IGHV3-35A0A0C4DH35 117 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 INS-IGF2F8WCM5 200 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 NDUFB6O95139 128 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 IFNA17P01571 189 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 RNASE2P10153 161 aaKnown RBP8.46□□□□□ -1.06
VRK3-210ENST00000596121 ADMP35318 185 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 PPP1R1AQ13522 171 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 MLANAQ16655 118 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 BSXQ3C1V8 233 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 TMEM128Q5BJH2 165 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 DEFB121Q5J5C9 76 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 UNQ9165/PRO28630Q6UXU0 137 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 RNASE11Q8TAA1 199 aaKnown RBP8.46□□□□□ -1.06
VRK3-210ENST00000596121 TMEM170AQ8WVE7 144 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 ELOVL1Q9BW60 279 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 PLEKHA3Q9HB20 300 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.46□□□□□ -1.06
VRK3-210ENST00000596121 SELENOKQ9Y6D0 94 aa8.46□□□□□ -1.06
VRK3-210ENST00000596121 A0A0B4J2A0 478 aa8.45□□□□□ -1.06
VRK3-210ENST00000596121 NAP1L6A6NFF2 107 aa8.45□□□□□ -1.06
VRK3-210ENST00000596121 OR2T8A6NH00 312 aa8.45□□□□□ -1.06
VRK3-210ENST00000596121 TGOLN2O43493 480 aa8.45□□□□□ -1.06
VRK3-210ENST00000596121 NXPH3O95157 252 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms