RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 FGF2P09038 288 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 AREGP15514 252 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 UCP3P55916 312 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 ATP5G2Q06055 141 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 RBMS2Q15434 407 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 ZNF585BQ52M93 769 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 PHLDA2Q53GA4 152 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 RNASE10Q5GAN6 216 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 LPCAT3Q6P1A2 487 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 ZNF575Q86XF7 245 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 DMBX1Q8NFW5 382 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 C2CD4CQ8TF44 421 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 C15orf40Q8WUR7 153 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 FCAMRQ8WWV6 532 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 DPPA5A6NC42 116 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 IGLL5B9A064 214 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 NOL3O60936 208 aaKnown RBP10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 OR2J3O76001 311 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 CRYGCP07315 174 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 RPA2P15927 270 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 RPL35AP18077 110 aaKnown RBP10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 TBPP20226 339 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 PSMB6P28072 239 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 FCGR2BP31994 310 aaPredicted RBP10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 LPAR6P43657 344 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 OR2B8PP59922 312 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 ERVK-16P61578 105 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 BTNL8Q6UX41 500 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 TBC1D26Q86UD7 250 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 LHFPL1Q86WI0 220 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 SLC38A6Q8IZM9 456 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 ARRDC1Q8N5I2 433 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 STPG3Q8N7X2 389 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 UXS1Q8NBZ7 420 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 NECAP1Q8NC96 275 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 C11orf45Q8TAV5 145 aa10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 SLIRPQ9GZT3 109 aaKnown RBP10.13□□□□□ -0.79
SHKBP1-208ENST00000595726 LRP1BQ9NZR2 4599 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 IGLC7A0M8Q6 106 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 ZNF320A2RRD8 509 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 TMEM213A2RRL7 107 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 GABARAPH6UMI1 98 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 UBE2CO00762 179 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 IGHV3-23P01764 117 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 CD74P04233 296 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 REG1AP05451 166 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 S100GP29377 79 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 G6PCP35575 357 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 MRPS10P82664 201 aaKnown RBP10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 KLK9Q2XQG4 91 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 C15orf32Q32M92 178 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 ANKRD55Q3KP44 614 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 OR4D10Q8NGI6 311 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 SMIM4Q8WVI0 70 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 FANCD2OSQ96PS1 177 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 COMMD5Q9GZQ3 224 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 FAM212BQ9NTI7 297 aaPredicted RBP10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 KLK9Q9UKQ9 250 aa10.12□□□□□ -0.79
SHKBP1-208ENST00000595726 APOBP04114 4563 aaKnown RBP10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 M0R2N4 97 aa10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 LGALS9O00182 355 aa10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 DEFB4AO15263 64 aa10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 GGCTO75223 188 aaKnown RBP10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 DHFRP00374 187 aa10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 KRASP01116 189 aa10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 TAS2R19P59542 299 aa10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 SSBP1Q04837 148 aaKnown RBP10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 CADM3Q8N126 398 aa10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 TMEM229BQ8NBD8 167 aa10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 DIRAS2Q96HU8 199 aa10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 SRSF8Q9BRL6 282 aaKnown RBP10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 QTRT1Q9BXR0 403 aaKnown RBP10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 C6orf62Q9GZU0 229 aaPredicted RBP10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 FBXL7Q9UJT9 491 aa10.11□□□□□ -0.79
SHKBP1-208ENST00000595726 IGLV11-55A0A075B6I3 123 aa10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 CTDSPLO15194 276 aa10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 IGKV1-39P01597 117 aa10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 IGKV1D-39P04432 117 aa10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 PGAM2P15259 253 aa10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 PTBP1P26599 531 aaKnown RBP eCLIP10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 PPP5CP53041 499 aa10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 RND3P61587 244 aa10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 IL18Q14116 193 aa10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 THOC7Q6I9Y2 204 aaKnown RBP10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 STEAP1BQ6NZ63 245 aa10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 OR10W1Q8NGF6 305 aa10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 OR1L6Q8NGR2 347 aa10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 ZNF486Q96H40 463 aaPredicted RBP10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 CCDC140Q96MF4 163 aa10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 NSG2Q9Y328 171 aa10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 S4R3C0 116 aa10.1□□□□□ -0.79
SHKBP1-208ENST00000595726 KIR2DL5BA0A0G2JN68 375 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 KIR2DL5BA0A0G2JPC4 375 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 TEX50A0A1B0GTY4 177 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 RAB3DO95716 219 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 DEFA4P12838 97 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 HIST1H1BP16401 226 aaKnown RBP10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 PI3P19957 117 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 TCTAP57738 103 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms