RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 RBMXL3Q8N7X1 1067 aaKnown RBP12.56□□□□□ -0.4
ZNF541-205ENST00000595558 PRSS33Q8NF86 280 aa12.56□□□□□ -0.4
ZNF541-205ENST00000595558 EAF1Q96JC9 268 aaPredicted RBP12.56□□□□□ -0.4
ZNF541-205ENST00000595558 AKAP6Q13023 2319 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 ABCA1O95477 2261 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 SAA2-SAA4A0A096LPE2 208 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 C15orf61A6NNL5 157 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 FCN1O00602 326 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 IGLV1-44P01699 117 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 SAA2P0DJI9 122 aaPredicted RBP12.55□□□□□ -0.4
ZNF541-205ENST00000595558 CRISP2P16562 243 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 NPY1RP25929 384 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 SELENOTP62341 195 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 TPTE2P1Q5T6R2 138 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 OR8I2Q8N0Y5 310 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 ST6GALNAC3Q8NDV1 305 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 SLC24A4Q8NFF2 622 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 RNASE7Q9H1E1 156 aaKnown RBP12.55□□□□□ -0.4
ZNF541-205ENST00000595558 CALYQ9NYX4 217 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 CRYBB3P26998 211 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 LGALS4P56470 323 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 FXYD3Q14802 87 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 C17orf58Q2M2W7 97 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 KIAA1644Q3SXP7 199 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 MMD2Q8IY49 270 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 PAM16Q9Y3D7 125 aa12.55□□□□□ -0.4
ZNF541-205ENST00000595558 IGKV1OR2-108A0A075B7D4 117 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 A6NNC1 897 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 FAM90A9PA6NNJ1 464 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 SNURFLB1AK76 121 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 M0R143 59 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 LINC00869P0C866 280 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 RAB4AP20338 218 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 TDGF1P3P51864 188 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 RHOBP62745 196 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 ITLN1Q8WWA0 313 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 V9GYV3 84 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 SPTBN1Q01082 2364 aaKnown RBP12.54□□□□□ -0.4
ZNF541-205ENST00000595558 MGST3O14880 152 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 TCL1AP56279 114 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 PSG5Q15238 335 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 MBNL2Q5VZF2 373 aaKnown RBP12.54□□□□□ -0.4
ZNF541-205ENST00000595558 VN1R17PQ8TDU5 208 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 ZNF503Q96F45 646 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 FAM103A1Q9BTL3 118 aaKnown RBP12.54□□□□□ -0.4
ZNF541-205ENST00000595558 LRFN3Q9BTN0 628 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 IDI2-AS1Q9NZ38 188 aa12.54□□□□□ -0.4
ZNF541-205ENST00000595558 F2RL2O00254 374 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 PLXNB1O43157 2135 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 OR10J4P0C629 311 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 GNG10P50151 68 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 CENPWQ5EE01 88 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 TRAT1Q6PIZ9 186 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 PQLC2Q6ZP29 291 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 BAGE3Q86Y29 109 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 BAGE2Q86Y30 109 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 MMP23AO75900 390 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 PRR20EP86478 221 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 PRR20CP86479 221 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 PRR20DP86480 221 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 PRR20BP86481 221 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 PRR20AP86496 221 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 LYG1Q8N1E2 194 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 TXNDC17Q9BRA2 123 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 TMEM14BQ9NUH8 114 aa12.53□□□□□ -0.4
ZNF541-205ENST00000595558 TRGV8A0A0C4DH27 118 aa12.52□□□□□ -0.4
ZNF541-205ENST00000595558 HSPE1P61604 102 aaKnown RBP12.52□□□□□ -0.4
ZNF541-205ENST00000595558 PRR30Q53SZ7 412 aaPredicted RBP12.52□□□□□ -0.4
ZNF541-205ENST00000595558 C1orf162Q8NEQ5 155 aaPredicted RBP12.52□□□□□ -0.4
ZNF541-205ENST00000595558 OR4S2Q8NH73 311 aa12.52□□□□□ -0.4
ZNF541-205ENST00000595558 BTF3L4Q96K17 158 aa12.52□□□□□ -0.4
ZNF541-205ENST00000595558 VPS13CQ709C8 3753 aa12.52□□□□□ -0.41
ZNF541-205ENST00000595558 TRGV10A0A0A0MS01 117 aa12.52□□□□□ -0.41
ZNF541-205ENST00000595558 IGKV1-16P04430 117 aa12.52□□□□□ -0.41
ZNF541-205ENST00000595558 IRF2P14316 349 aa12.52□□□□□ -0.41
ZNF541-205ENST00000595558 COMPP49747 757 aaPredicted RBP12.52□□□□□ -0.41
ZNF541-205ENST00000595558 TPPP2P59282 170 aa12.52□□□□□ -0.41
ZNF541-205ENST00000595558 C11orf52Q96A22 123 aa12.52□□□□□ -0.41
ZNF541-205ENST00000595558 GNB4Q9HAV0 340 aa12.52□□□□□ -0.41
ZNF541-205ENST00000595558 SRRM4A7MD48 611 aaKnown RBP12.51□□□□□ -0.41
ZNF541-205ENST00000595558 CGB3P0DN86 165 aa12.51□□□□□ -0.41
ZNF541-205ENST00000595558 CGB7P0DN87 165 aa12.51□□□□□ -0.41
ZNF541-205ENST00000595558 RPEL1Q2QD12 228 aa12.51□□□□□ -0.41
ZNF541-205ENST00000595558 CR1LQ2VPA4 569 aa12.51□□□□□ -0.41
ZNF541-205ENST00000595558 NABP2Q9BQ15 211 aa12.51□□□□□ -0.41
ZNF541-205ENST00000595558 ZFHX3Q15911 3703 aa12.51□□□□□ -0.41
ZNF541-205ENST00000595558 A0A1B0GWJ7 208 aa12.51□□□□□ -0.41
ZNF541-205ENST00000595558 MBD3L4A6NDZ8 208 aaPredicted RBP12.51□□□□□ -0.41
ZNF541-205ENST00000595558 MBD3L3A6NE82 208 aaPredicted RBP12.51□□□□□ -0.41
ZNF541-205ENST00000595558 MBD3L5A6NJ08 208 aaPredicted RBP12.51□□□□□ -0.41
ZNF541-205ENST00000595558 CEACAM4O75871 244 aa12.51□□□□□ -0.41
ZNF541-205ENST00000595558 ZNF25P17030 456 aaPredicted RBP12.51□□□□□ -0.41
ZNF541-205ENST00000595558 CCL8P80075 99 aa12.51□□□□□ -0.41
ZNF541-205ENST00000595558 NHLRC2Q8NBF2 726 aa12.51□□□□□ -0.41
ZNF541-205ENST00000595558 MBD3L2Q8NHZ7 208 aaPredicted RBP12.51□□□□□ -0.41
ZNF541-205ENST00000595558 RCHY1Q96PM5 261 aa12.51□□□□□ -0.41
ZNF541-205ENST00000595558 FBXL7Q9UJT9 491 aa12.51□□□□□ -0.41
ZNF541-205ENST00000595558 OR51B2Q9Y5P1 312 aa12.51□□□□□ -0.41
ZNF541-205ENST00000595558 HELTA6NFD8 242 aa12.5□□□□□ -0.41
ZNF541-205ENST00000595558 C9JCJ5 164 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms