RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 LRRK1Q38SD2 2015 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 G3V4G9 280 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 J3QW42 95 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 K7EP34 96 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 ZIC3O60481 467 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 KLF7O75840 302 aaPredicted RBP10.35□□□□□ -0.75
LIG1-207ENST00000594759 CEACAM3P40198 252 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 SLC25A45Q8N413 288 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 TPRX1Q8N7U7 411 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 OR4X2Q8NGF9 303 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 ZC2HC1AQ96GY0 325 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 AMMECR1Q9Y4X0 333 aaPredicted RBP10.35□□□□□ -0.75
LIG1-207ENST00000594759 HIGD1CA8MV81 97 aa10.34□□□□□ -0.75
LIG1-207ENST00000594759 CRYBA4P53673 196 aa10.34□□□□□ -0.75
LIG1-207ENST00000594759 SARAFQ96BY9 339 aa10.34□□□□□ -0.75
LIG1-207ENST00000594759 ZNF524Q96C55 264 aa10.34□□□□□ -0.75
LIG1-207ENST00000594759 UCN2Q96RP3 112 aa10.34□□□□□ -0.75
LIG1-207ENST00000594759 H3BRM9 83 aa10.34□□□□□ -0.75
LIG1-207ENST00000594759 REG1AP05451 166 aa10.34□□□□□ -0.75
LIG1-207ENST00000594759 OPRK1P41145 380 aa10.34□□□□□ -0.75
LIG1-207ENST00000594759 RIGQ13278 110 aa10.34□□□□□ -0.75
LIG1-207ENST00000594759 COMMD5Q9GZQ3 224 aa10.34□□□□□ -0.75
LIG1-207ENST00000594759 NHP2Q9NX24 153 aaKnown RBP10.34□□□□□ -0.75
LIG1-207ENST00000594759 ZNF106Q9H2Y7 1883 aaKnown RBP10.34□□□□□ -0.75
LIG1-207ENST00000594759 IGLC1P0CG04 106 aa10.34□□□□□ -0.75
LIG1-207ENST00000594759 SMIM17P0DL12 118 aa10.34□□□□□ -0.75
LIG1-207ENST00000594759 IGLV3-21P80748 117 aaPredicted RBP10.34□□□□□ -0.75
LIG1-207ENST00000594759 PSG4Q00888 419 aa10.34□□□□□ -0.75
LIG1-207ENST00000594759 GRAMD2BQ96HH9 432 aa10.34□□□□□ -0.75
LIG1-207ENST00000594759 RANBP2P49792 3224 aaKnown RBP10.34□□□□□ -0.75
LIG1-207ENST00000594759 FRMPD3Q5JV73 1810 aa10.33□□□□□ -0.75
LIG1-207ENST00000594759 KIF26AQ9ULI4 1882 aaPredicted RBP10.33□□□□□ -0.76
LIG1-207ENST00000594759 MLNRO43193 412 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 RAMP3O60896 148 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 FAM27BQ5VT28 67 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 LYPD6Q86Y78 171 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 SGK494Q96LW2 274 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 SFXN3Q9BWM7 321 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 TRGV10A0A0A0MS01 117 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 CXCL13O43927 109 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 SPINK8P0C7L1 97 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 RHOGP84095 191 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 GUSBP1Q15486 140 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 SLC23A3Q6PIS1 610 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 TMEM14EPQ6UXP3 125 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 ABHD12Q8N2K0 398 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 OR2M7Q8NG81 312 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 LOXL2Q9Y4K0 774 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 C9JCJ5 164 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 PDPNQ86YL7 162 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 C1orf210Q8IVY1 113 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 TEX29Q8N6K0 151 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 POM121L2Q96KW2 1035 aa10.33□□□□□ -0.76
LIG1-207ENST00000594759 CLDN14O95500 239 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 SP1P08047 785 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 CYB561P49447 251 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 PRR31Q5SQ13 230 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 TICRRQ7Z2Z1 1910 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 ANAPC1Q9H1A4 1944 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 YPEL1O60688 119 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 OR4A5Q8NH83 315 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 OR1L1Q8NH94 360 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 YPEL2Q96QA6 119 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 SF3B5Q9BWJ5 86 aaKnown RBP10.32□□□□□ -0.76
LIG1-207ENST00000594759 MRPL13Q9BYD1 178 aaKnown RBP10.32□□□□□ -0.76
LIG1-207ENST00000594759 TNFRSF19Q9NS68 423 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 WDR83OSQ9Y284 106 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 PCNX1Q96RV3 2341 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 IGKV1-12A0A0C4DH73 117 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 C22orf46C9J442 243 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 IGKV1D-12P01611 117 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 APOHP02749 345 aaPredicted RBP10.32□□□□□ -0.76
LIG1-207ENST00000594759 MEF2CQ06413 473 aaPredicted RBP10.32□□□□□ -0.76
LIG1-207ENST00000594759 OR2Z1Q8NG97 314 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 HIST1H4GQ99525 98 aa10.32□□□□□ -0.76
LIG1-207ENST00000594759 WISP1O95388 367 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 GAGE13Q4V321 117 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 ZIC4Q8N9L1 334 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 FLVCR1-AS1Q8TAF5 88 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 DENND4CQ5VZ89 1909 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 TEX48A0A1B0GUV7 120 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 APOMO95445 188 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 IGKV1-5P01602 117 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 ERHP84090 104 aaKnown RBP10.31□□□□□ -0.76
LIG1-207ENST00000594759 ZADH2Q8N4Q0 377 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 CHCHD1Q96BP2 118 aaKnown RBP10.31□□□□□ -0.76
LIG1-207ENST00000594759 ZNF414Q96IQ9 312 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 MS4A5Q9H3V2 200 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 RAB9BQ9NP90 201 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 DLL3Q9NYJ7 618 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 J3QR06 171 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 GATA2P23769 480 aaPredicted RBP10.31□□□□□ -0.76
LIG1-207ENST00000594759 CEACAM21Q3KPI0 293 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 ETDBQ3ZM63 59 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 SPATA46Q5T0L3 261 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 C6orf15Q6UXA7 325 aaPredicted RBP10.31□□□□□ -0.76
LIG1-207ENST00000594759 CNEP1R1Q8N9A8 125 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 NABP2Q9BQ15 211 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 KIAA1671Q9BY89 1806 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 SH2D7A6NKC9 451 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms