RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 MARC2Q969Z3 335 aa11□□□□□ -0.65
PNKP-202ENST00000593706 QTRT1Q9BXR0 403 aaKnown RBP11□□□□□ -0.65
PNKP-202ENST00000593706 RPA2P15927 270 aa10.99□□□□□ -0.65
PNKP-202ENST00000593706 PTBP1P26599 531 aaKnown RBP eCLIP10.99□□□□□ -0.65
PNKP-202ENST00000593706 RPL5P46777 297 aaKnown RBP10.99□□□□□ -0.65
PNKP-202ENST00000593706 TSPAN5P62079 268 aa10.99□□□□□ -0.65
PNKP-202ENST00000593706 WT1-ASQ06250 92 aa10.99□□□□□ -0.65
PNKP-202ENST00000593706 DEFB135Q30KP9 77 aa10.99□□□□□ -0.65
PNKP-202ENST00000593706 LPCAT3Q6P1A2 487 aa10.99□□□□□ -0.65
PNKP-202ENST00000593706 UNQ9165/PRO28630Q6UXU0 137 aa10.99□□□□□ -0.65
PNKP-202ENST00000593706 TBC1D26Q86UD7 250 aa10.99□□□□□ -0.65
PNKP-202ENST00000593706 ARRDC1Q8N5I2 433 aa10.99□□□□□ -0.65
PNKP-202ENST00000593706 OR10W1Q8NGF6 305 aa10.99□□□□□ -0.65
PNKP-202ENST00000593706 MRGPRFQ96AM1 343 aa10.99□□□□□ -0.65
PNKP-202ENST00000593706 COMMD5Q9GZQ3 224 aa10.99□□□□□ -0.65
PNKP-202ENST00000593706 NDUFA4L2Q9NRX3 87 aa10.99□□□□□ -0.65
PNKP-202ENST00000593706 TMEM14BQ9NUH8 114 aa10.99□□□□□ -0.65
PNKP-202ENST00000593706 UFC1Q9Y3C8 167 aa10.99□□□□□ -0.65
PNKP-202ENST00000593706 TRAV25A0A0B4J276 109 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 IGHV3-35A0A0C4DH35 117 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 TEX50A0A1B0GTY4 177 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 DBX1A6NMT0 343 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 H3BMQ9 156 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 KRASP01116 189 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 CLEC3BP05452 202 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 BMI1P35226 326 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 G6PCP35575 357 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 ERVK-16P61578 105 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 RND3P61587 244 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 RNASE10Q5GAN6 216 aaKnown RBP10.98□□□□□ -0.65
PNKP-202ENST00000593706 PLET1Q6UQ28 207 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 LYG2Q86SG7 212 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 C15orf40Q8WUR7 153 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 SMIM4Q8WVI0 70 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 SEC22AQ96IW7 307 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 SLIRPQ9GZT3 109 aaKnown RBP10.98□□□□□ -0.65
PNKP-202ENST00000593706 MRPL27Q9P0M9 148 aaKnown RBP10.98□□□□□ -0.65
PNKP-202ENST00000593706 UBQLN2Q9UHD9 624 aa10.98□□□□□ -0.65
PNKP-202ENST00000593706 GABARAPH6UMI1 98 aa10.97□□□□□ -0.65
PNKP-202ENST00000593706 CYB5BO43169 146 aa10.97□□□□□ -0.65
PNKP-202ENST00000593706 SPRY2O43597 315 aa10.97□□□□□ -0.65
PNKP-202ENST00000593706 MFAP2P55001 183 aa10.97□□□□□ -0.65
PNKP-202ENST00000593706 SSBP1Q04837 148 aaKnown RBP10.97□□□□□ -0.65
PNKP-202ENST00000593706 TNFRSF9Q07011 255 aa10.97□□□□□ -0.65
PNKP-202ENST00000593706 THOC7Q6I9Y2 204 aaKnown RBP10.97□□□□□ -0.65
PNKP-202ENST00000593706 OR2C3Q8N628 320 aa10.97□□□□□ -0.65
PNKP-202ENST00000593706 GDPD1Q8N9F7 314 aa10.97□□□□□ -0.65
PNKP-202ENST00000593706 TMEM229BQ8NBD8 167 aa10.97□□□□□ -0.65
PNKP-202ENST00000593706 SPAG8Q99932 426 aaPredicted RBP10.97□□□□□ -0.65
PNKP-202ENST00000593706 THYN1Q9P016 225 aa10.97□□□□□ -0.65
PNKP-202ENST00000593706 TP53TG1Q9Y2A0 90 aa10.97□□□□□ -0.65
PNKP-202ENST00000593706 NSG2Q9Y328 171 aa10.97□□□□□ -0.65
PNKP-202ENST00000593706 C15orf61A6NNL5 157 aa10.96□□□□□ -0.65
PNKP-202ENST00000593706 RGS5O15539 181 aa10.96□□□□□ -0.65
PNKP-202ENST00000593706 P0C879 139 aa10.96□□□□□ -0.65
PNKP-202ENST00000593706 TRAPPC2P0DI81 140 aa10.96□□□□□ -0.65
PNKP-202ENST00000593706 TRAPPC2BP0DI82 140 aa10.96□□□□□ -0.65
PNKP-202ENST00000593706 ELLP55199 621 aaPredicted RBP10.96□□□□□ -0.65
PNKP-202ENST00000593706 MRPS10P82664 201 aaKnown RBP10.96□□□□□ -0.65
PNKP-202ENST00000593706 EWSR1Q01844 656 aaKnown RBP eCLIP10.96□□□□□ -0.65
PNKP-202ENST00000593706 Q6ZWC4 215 aa10.96□□□□□ -0.65
PNKP-202ENST00000593706 HSD17B13Q7Z5P4 300 aaPredicted RBP10.96□□□□□ -0.65
PNKP-202ENST00000593706 WFDC3Q8IUB2 231 aa10.96□□□□□ -0.65
PNKP-202ENST00000593706 OR1L8Q8NGR8 309 aa10.96□□□□□ -0.65
PNKP-202ENST00000593706 ZNF502Q8TBZ5 544 aa10.96□□□□□ -0.65
PNKP-202ENST00000593706 ZNF486Q96H40 463 aaPredicted RBP10.96□□□□□ -0.65
PNKP-202ENST00000593706 SOSTQ9BQB4 213 aa10.96□□□□□ -0.65
PNKP-202ENST00000593706 NXF2Q9GZY0 626 aaKnown RBP10.96□□□□□ -0.65
PNKP-202ENST00000593706 PRNDQ9UKY0 176 aa10.96□□□□□ -0.65
PNKP-202ENST00000593706 KLK5Q9Y337 293 aaPredicted RBP10.96□□□□□ -0.65
PNKP-202ENST00000593706 DNAH10Q8IVF4 4471 aa10.95□□□□□ -0.66
PNKP-202ENST00000593706 CTDSPLO15194 276 aa10.95□□□□□ -0.66
PNKP-202ENST00000593706 TGOLN2O43493 480 aa10.95□□□□□ -0.66
PNKP-202ENST00000593706 SERPINE2P07093 398 aa10.95□□□□□ -0.66
PNKP-202ENST00000593706 C8orf88P0DMB2 117 aa10.95□□□□□ -0.66
PNKP-202ENST00000593706 OR13C7P0DN81 318 aa10.95□□□□□ -0.66
PNKP-202ENST00000593706 PI3P19957 117 aa10.95□□□□□ -0.66
PNKP-202ENST00000593706 S100GP29377 79 aa10.95□□□□□ -0.66
PNKP-202ENST00000593706 TAS2R19P59542 299 aa10.95□□□□□ -0.66
PNKP-202ENST00000593706 CEMP1Q6PRD7 247 aaPredicted RBP10.95□□□□□ -0.66
PNKP-202ENST00000593706 OR5B3Q8NH48 314 aa10.95□□□□□ -0.66
PNKP-202ENST00000593706 TMEM190Q8WZ59 177 aa10.95□□□□□ -0.66
PNKP-202ENST00000593706 LSM10Q969L4 123 aaKnown RBP10.95□□□□□ -0.66
PNKP-202ENST00000593706 TP53RKQ96S44 253 aa10.95□□□□□ -0.66
PNKP-202ENST00000593706 C5orf66Q9H5L9 145 aa10.95□□□□□ -0.66
PNKP-202ENST00000593706 OR51B2Q9Y5P1 312 aa10.95□□□□□ -0.66
PNKP-202ENST00000593706 HECTD4Q9Y4D8 3996 aa10.94□□□□□ -0.66
PNKP-202ENST00000593706 OR2T8A6NH00 312 aa10.94□□□□□ -0.66
PNKP-202ENST00000593706 F8W735 103 aaPredicted RBP10.94□□□□□ -0.66
PNKP-202ENST00000593706 UBE2CO00762 179 aa10.94□□□□□ -0.66
PNKP-202ENST00000593706 IGKV1-5P01602 117 aa10.94□□□□□ -0.66
PNKP-202ENST00000593706 PPP5CP53041 499 aa10.94□□□□□ -0.66
PNKP-202ENST00000593706 PIGPP57054 158 aa10.94□□□□□ -0.66
PNKP-202ENST00000593706 LAMTOR1Q6IAA8 161 aa10.94□□□□□ -0.66
PNKP-202ENST00000593706 FAAP20Q6NZ36 180 aa10.94□□□□□ -0.66
PNKP-202ENST00000593706 STEAP1BQ6NZ63 245 aa10.94□□□□□ -0.66
PNKP-202ENST00000593706 TMEM217Q8N7C4 229 aa10.94□□□□□ -0.66
PNKP-202ENST00000593706 STPG3Q8N7X2 389 aa10.94□□□□□ -0.66
PNKP-202ENST00000593706 OR13C8Q8NGS7 320 aa10.94□□□□□ -0.66
PNKP-202ENST00000593706 TERB2Q8NHR7 220 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms