RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 SPATA31B1PQ5VZV4 182 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 UGT2A3Q6UWM9 527 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 ZNF620Q6ZNG0 422 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 DGAT2L6Q6ZPD8 337 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 H1FOOQ8IZA3 346 aaPredicted RBP4.5□□□□□ -1.69
VMP1-215ENST00000592619 OR5W2Q8NH69 310 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 OR10G6Q8NH81 332 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 ZNF418Q8TF45 676 aaPredicted RBP4.5□□□□□ -1.69
VMP1-215ENST00000592619 NAT14Q8WUY8 206 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 KLK6Q92876 244 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 HIST1H2BAQ96A08 127 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 MALSU1Q96EH3 234 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 TBL1YQ9BQ87 522 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 POLR2J2Q9GZM3 115 aaKnown RBP4.5□□□□□ -1.69
VMP1-215ENST00000592619 PBOV1Q9GZY1 135 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 POLR2J3Q9H1A7 115 aaKnown RBP4.5□□□□□ -1.69
VMP1-215ENST00000592619 IFI27L2Q9H2X8 130 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 CDC42EP4Q9H3Q1 356 aaKnown RBP4.5□□□□□ -1.69
VMP1-215ENST00000592619 EFCAB1Q9HAE3 211 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 TAF9BQ9HBM6 251 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 HES4Q9HCC6 221 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 PRTFDC1Q9NRG1 225 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 UBQLN4Q9NRR5 601 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 OTOGLQ3ZCN5 2332 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 TRPM6Q9BX84 2022 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 RBFOX3A6NFN3 312 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 INMT-MINDY4F8WBC2 141 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 AGPAT2O15120 278 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 CCL25O15444 150 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 IGHMP01871 453 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 SMIM17P0DL12 118 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 RPL7P18124 248 aaKnown RBP4.49□□□□□ -1.69
VMP1-215ENST00000592619 CSRP1P21291 193 aaKnown RBP4.49□□□□□ -1.69
VMP1-215ENST00000592619 GABRA2P47869 451 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 SPINT3P49223 89 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 POLR2HP52434 150 aaKnown RBP4.49□□□□□ -1.69
VMP1-215ENST00000592619 PRDX4Q13162 271 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 TTC32Q5I0X7 151 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 CASC10Q5T4H9 136 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 IL34Q6ZMJ4 242 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 OR8S1Q8NH09 359 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 MAGOHBQ96A72 148 aaKnown RBP4.49□□□□□ -1.69
VMP1-215ENST00000592619 C16orf74Q96GX8 76 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 PSMG3Q9BT73 122 aaPredicted RBP4.49□□□□□ -1.69
VMP1-215ENST00000592619 TMEM222Q9H0R3 208 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 HSPE1-MOB4S4R3N1 261 aa4.49□□□□□ -1.69
VMP1-215ENST00000592619 SPEGQ15772 3267 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 MYLKQ15746 1914 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 WDFY3Q8IZQ1 3526 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 ZFHX2Q9C0A1 2572 aaPredicted RBP4.48□□□□□ -1.69
VMP1-215ENST00000592619 CACNA1EQ15878 2313 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 TRAV8-2A0A0B4J237 113 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 A0A1B0GXF2 115 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 CIB4A0PJX0 185 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 TMEM218A2RU14 115 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 FABP5P3A8MUU1 101 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 H7C1H1 209 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 M0R2Z0 102 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 DHRS3O75911 302 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 ARL6IP5O75915 188 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 OR2A4O95047 310 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 EPPINO95925 133 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 SOD1P00441 154 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 ATP5G1P05496 136 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 SCTP09683 121 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 OR4A8P0C604 315 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 COX7A1P24310 79 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 MYL9P24844 172 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 RPL22P35268 128 aaKnown RBP4.48□□□□□ -1.69
VMP1-215ENST00000592619 RND2P52198 227 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 FZD2Q14332 565 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 ZNF181Q2M3W8 571 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 NCMAPQ5T1S8 102 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 C11orf53Q8IXP5 236 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 DEFB125Q8N687 156 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 TCTEX1D1Q8N7M0 179 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 CT55Q8WUE5 264 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 GPR146Q96CH1 333 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 ISOC1Q96CN7 298 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 COX14Q96I36 57 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 OR2M4Q96R27 311 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 OR2A7Q96R45 310 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 OR52B2Q96RD2 323 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 LPAR5Q9H1C0 372 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 CACYBPQ9HB71 228 aaKnown RBP4.48□□□□□ -1.69
VMP1-215ENST00000592619 LHX9Q9NQ69 397 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 PCYOX1Q9UHG3 505 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 DOCK9Q9BZ29 2069 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 PI4KAP42356 2102 aa4.48□□□□□ -1.69
VMP1-215ENST00000592619 TRAV26-2A0A0B4J265 109 aa4.47□□□□□ -1.69
VMP1-215ENST00000592619 A0A0B4J2A0 478 aa4.47□□□□□ -1.69
VMP1-215ENST00000592619 A0A0J9YXY3 114 aa4.47□□□□□ -1.69
VMP1-215ENST00000592619 GMNCA6NCL1 334 aa4.47□□□□□ -1.69
VMP1-215ENST00000592619 C9JAW5 83 aa4.47□□□□□ -1.69
VMP1-215ENST00000592619 KRBOX1C9JBD0 128 aa4.47□□□□□ -1.69
VMP1-215ENST00000592619 H3BQF6 201 aa4.47□□□□□ -1.69
VMP1-215ENST00000592619 RBFOX2O43251 390 aaKnown RBP eCLIP4.47□□□□□ -1.69
VMP1-215ENST00000592619 ZNF207O43670 478 aaKnown RBP4.47□□□□□ -1.69
VMP1-215ENST00000592619 PDCD6O75340 191 aa4.47□□□□□ -1.69
VMP1-215ENST00000592619 SPAG7O75391 227 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms