RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	GPHB5	Q86YW7	130 aa		12.49	□□□□□ -0.41
CIRBP-233	ENST00000591622		Q8N402	240 aa		12.49	□□□□□ -0.41
CIRBP-233	ENST00000591622	ZNF502	Q8TBZ5	544 aa		12.49	□□□□□ -0.41
CIRBP-233	ENST00000591622	VN1R17P	Q8TDU5	208 aa		12.49	□□□□□ -0.41
CIRBP-233	ENST00000591622	TMEM222	Q9H0R3	208 aa		12.49	□□□□□ -0.41
CIRBP-233	ENST00000591622	SCP2D1	Q9UJQ7	156 aa		12.49	□□□□□ -0.41
CIRBP-233	ENST00000591622	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	12.48	□□□□□ -0.41
CIRBP-233	ENST00000591622	CDS2	O95674	445 aa		12.48	□□□□□ -0.41
CIRBP-233	ENST00000591622	MFAP2	P55001	183 aa		12.48	□□□□□ -0.41
CIRBP-233	ENST00000591622	PRCD	Q00LT1	54 aa		12.48	□□□□□ -0.41
CIRBP-233	ENST00000591622	ZNF79	Q15937	498 aa		12.48	□□□□□ -0.41
CIRBP-233	ENST00000591622	OR1L6	Q8NGR2	347 aa		12.48	□□□□□ -0.41
CIRBP-233	ENST00000591622	TRIM63	Q969Q1	353 aa		12.48	□□□□□ -0.41
CIRBP-233	ENST00000591622	NAA60	Q9H7X0	242 aa		12.48	□□□□□ -0.41
CIRBP-233	ENST00000591622	MCUB	Q9NWR8	336 aa		12.48	□□□□□ -0.41
CIRBP-233	ENST00000591622		A0A0B4J293	547 aa		12.47	□□□□□ -0.41
CIRBP-233	ENST00000591622	CRYM-AS1	A6NIL9	109 aa		12.47	□□□□□ -0.41
CIRBP-233	ENST00000591622	LGALS9	O00182	355 aa		12.47	□□□□□ -0.41
CIRBP-233	ENST00000591622	OR5AC1	P0C628	307 aa		12.47	□□□□□ -0.41
CIRBP-233	ENST00000591622	KLF9	Q13886	244 aa	Predicted RBP	12.47	□□□□□ -0.41
CIRBP-233	ENST00000591622	OR1P1	Q8NH06	330 aa		12.47	□□□□□ -0.41
CIRBP-233	ENST00000591622	GLYATL2	Q8WU03	294 aa		12.47	□□□□□ -0.41
CIRBP-233	ENST00000591622	RRNAD1	Q96FB5	475 aa	Known RBP	12.47	□□□□□ -0.41
CIRBP-233	ENST00000591622	SCGB3A2	Q96PL1	93 aa		12.47	□□□□□ -0.41
CIRBP-233	ENST00000591622	SMAD5-AS1	Q9Y6J3	95 aa		12.47	□□□□□ -0.41
CIRBP-233	ENST00000591622	GPR183	P32249	361 aa		12.46	□□□□□ -0.41
CIRBP-233	ENST00000591622	FAU	P35544	74 aa	Known RBP	12.46	□□□□□ -0.41
CIRBP-233	ENST00000591622	ETV6	P41212	452 aa		12.46	□□□□□ -0.41
CIRBP-233	ENST00000591622	AP3S2	P59780	193 aa		12.46	□□□□□ -0.41
CIRBP-233	ENST00000591622	DHODH	Q02127	395 aa		12.46	□□□□□ -0.41
CIRBP-233	ENST00000591622	FAM106A	Q4KMX7	169 aa		12.46	□□□□□ -0.41
CIRBP-233	ENST00000591622	ADAMTSL5	Q6ZMM2	481 aa		12.46	□□□□□ -0.41
CIRBP-233	ENST00000591622	TOMM5	Q8N4H5	51 aa		12.46	□□□□□ -0.41
CIRBP-233	ENST00000591622	OR2C3	Q8N628	320 aa		12.46	□□□□□ -0.41
CIRBP-233	ENST00000591622	PLEKHA3	Q9HB20	300 aa		12.46	□□□□□ -0.41
CIRBP-233	ENST00000591622		A0A0G2JRQ6	117 aa		12.45	□□□□□ -0.42
CIRBP-233	ENST00000591622	ZNF320	A2RRD8	509 aa		12.45	□□□□□ -0.42
CIRBP-233	ENST00000591622	ST8SIA3	O43173	380 aa		12.45	□□□□□ -0.42
CIRBP-233	ENST00000591622	SPANXN2	Q5MJ10	180 aa		12.45	□□□□□ -0.42
CIRBP-233	ENST00000591622	LCN12	Q6JVE5	192 aa		12.45	□□□□□ -0.42
CIRBP-233	ENST00000591622	PLET1	Q6UQ28	207 aa		12.45	□□□□□ -0.42
CIRBP-233	ENST00000591622	SGPP2	Q8IWX5	399 aa		12.45	□□□□□ -0.42
CIRBP-233	ENST00000591622	ZNF114	Q8NC26	417 aa		12.45	□□□□□ -0.42
CIRBP-233	ENST00000591622	RNASE11	Q8TAA1	199 aa	Known RBP	12.45	□□□□□ -0.42
CIRBP-233	ENST00000591622	LHFPL5	Q8TAF8	219 aa		12.45	□□□□□ -0.42
CIRBP-233	ENST00000591622	SCARB1	Q8WTV0	552 aa		12.45	□□□□□ -0.42
CIRBP-233	ENST00000591622	RBPMS	Q93062	196 aa	Known RBP	12.45	□□□□□ -0.42
CIRBP-233	ENST00000591622	ATP6V0B	Q99437	205 aa		12.45	□□□□□ -0.42
CIRBP-233	ENST00000591622	ZC4H2	Q9NQZ6	224 aa		12.45	□□□□□ -0.42
CIRBP-233	ENST00000591622	COL7A1	Q02388	2944 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	C2orf70	A6NJV1	201 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622		K7EIM0	57 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	TGOLN2	O43493	480 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	IFNA17	P01571	189 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	FOLR2	P14207	255 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	ERH	P84090	104 aa	Known RBP	12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	SPINK9	Q5DT21	86 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	FAM219A	Q8IW50	185 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	SELENOH	Q8IZQ5	122 aa	Known RBP	12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	OR2K2	Q8NGT1	345 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	DEDD2	Q8WXF8	326 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	TMEM230	Q96A57	120 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	PDCD10	Q9BUL8	212 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	C21orf62	Q9NYP8	219 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	NDUFA13	Q9P0J0	144 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	KCNIP3	Q9Y2W7	256 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	TMEM56-RWDD3	S4R434	201 aa		12.44	□□□□□ -0.42
CIRBP-233	ENST00000591622	IGHV3-21	A0A0B4J1V1	117 aa		12.43	□□□□□ -0.42
CIRBP-233	ENST00000591622	OR2T8	A6NH00	312 aa		12.43	□□□□□ -0.42
CIRBP-233	ENST00000591622		A8MWP6	167 aa		12.43	□□□□□ -0.42
CIRBP-233	ENST00000591622	INS-IGF2	F8WCM5	200 aa		12.43	□□□□□ -0.42
CIRBP-233	ENST00000591622	TMEM268	Q5VZI3	342 aa		12.43	□□□□□ -0.42
CIRBP-233	ENST00000591622		Q6ZRM9	215 aa		12.43	□□□□□ -0.42
CIRBP-233	ENST00000591622		Q8N1Y9	231 aa		12.43	□□□□□ -0.42
CIRBP-233	ENST00000591622	SLC35G3	Q8N808	338 aa		12.43	□□□□□ -0.42
CIRBP-233	ENST00000591622	GALNT14	Q96FL9	552 aa		12.43	□□□□□ -0.42
CIRBP-233	ENST00000591622	BSCL2	Q96G97	398 aa	Predicted RBP	12.43	□□□□□ -0.42
CIRBP-233	ENST00000591622	TMEM213	A2RRL7	107 aa		12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	IZUMO1R	A6ND01	250 aa		12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622		F8W735	103 aa	Predicted RBP	12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622		I3L2K1	104 aa		12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	NHLRC4	P0CG21	123 aa	Predicted RBP	12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	AKR1C4	P17516	323 aa		12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	EDN2	P20800	178 aa		12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	CBLN1	P23435	193 aa		12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	SNCA	P37840	140 aa		12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	DEFB114	Q30KQ6	69 aa		12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	CD300E	Q496F6	205 aa	Predicted RBP	12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	AARD	Q4LEZ3	155 aa		12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	SPSB3	Q6PJ21	355 aa		12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	UNQ9165/PRO28630	Q6UXU0	137 aa		12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	DYNLRB2	Q8TF09	96 aa		12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	MISP3	Q96FF7	219 aa		12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	SRR	Q9GZT4	340 aa		12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	TECR	Q9NZ01	308 aa	Known RBP	12.42	□□□□□ -0.42
CIRBP-233	ENST00000591622	IGHV3-35	A0A0C4DH35	117 aa		12.41	□□□□□ -0.42
CIRBP-233	ENST00000591622	SUPT4H1	P63272	117 aa	Known RBP	12.41	□□□□□ -0.42
CIRBP-233	ENST00000591622	TMEM187	Q14656	261 aa		12.41	□□□□□ -0.42
CIRBP-233	ENST00000591622	C11orf87	Q6NUJ2	197 aa		12.41	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms