RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 RAB7AP51149 207 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 ZNF134P52741 427 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 CASP6P55212 293 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 HSPE1P61604 102 aaKnown RBP8.9□□□□□ -0.98
VPS4B-206ENST00000591475 PRR20EP86478 221 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 PRR20CP86479 221 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 PRR20DP86480 221 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 PRR20BP86481 221 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 PRR20AP86496 221 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 WDR73Q6P4I2 378 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 OR8I2Q8N0Y5 310 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 VN1R17PQ8TDU5 208 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 SFXN3Q9BWM7 321 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 TMEM167BQ9NRX6 74 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 SLC45A2Q9UMX9 530 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 SPTA1P02549 2419 aa8.9□□□□□ -0.98
VPS4B-206ENST00000591475 A0A1B0GWJ7 208 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 HELTA6NFD8 242 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 SRRM5B3KS81 715 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 ITGB1BP1O14713 200 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 CA2P00918 260 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 IGHV3-13P01766 116 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 IGHV3-7P01780 117 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 MT-ND6P03923 174 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 OR10J4P0C629 311 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 IGFBP2P18065 325 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 CDKN1AP38936 164 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 OR5I1Q13606 314 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 GUSBP1Q15486 140 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 COX19Q49B96 90 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 CENPWQ5EE01 88 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 OR4A47Q6IF82 309 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 MIR17HGQ75NE6 70 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 LRP11Q86VZ4 500 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 C1orf174Q8IYL3 243 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 SIGLECL1Q8N7X8 197 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 OR2Z1Q8NG97 314 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 TMEM14BQ9NUH8 114 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 CALYQ9NYX4 217 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 IL19Q9UHD0 177 aa8.9□□□□□ -0.99
VPS4B-206ENST00000591475 TPRP12270 2363 aaKnown RBP8.9□□□□□ -0.99
VPS4B-206ENST00000591475 LINC00869P0C866 280 aa8.89□□□□□ -0.99
VPS4B-206ENST00000591475 PSG5Q15238 335 aa8.89□□□□□ -0.99
VPS4B-206ENST00000591475 TDRG1Q3Y452 100 aa8.89□□□□□ -0.99
VPS4B-206ENST00000591475 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.89□□□□□ -0.99
VPS4B-206ENST00000591475 FAM57AQ8TBR7 257 aa8.89□□□□□ -0.99
VPS4B-206ENST00000591475 NEUROG1Q92886 237 aa8.89□□□□□ -0.99
VPS4B-206ENST00000591475 RAB9BQ9NP90 201 aa8.89□□□□□ -0.99
VPS4B-206ENST00000591475 ZNF586Q9NXT0 402 aa8.89□□□□□ -0.99
VPS4B-206ENST00000591475 PAM16Q9Y3D7 125 aa8.89□□□□□ -0.99
VPS4B-206ENST00000591475 IGHV3OR15-7A0A075B7D8 119 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 IGHV2OR16-5A0A0B4J2B6 119 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 F2Z2F3 143 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 PRRG2O14669 202 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 ACTL6BO94805 426 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 IGLV1-44P01699 117 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 IRF2P14316 349 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 BRS3P32247 399 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 CX3CL1P78423 397 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 GFRALQ6UXV0 394 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 GNB4Q9HAV0 340 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 OSTCQ9NRP0 149 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 TECRQ9NZ01 308 aaKnown RBP8.88□□□□□ -0.99
VPS4B-206ENST00000591475 NAT8BQ9UHF3 227 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 MBD3L4A6NDZ8 208 aaPredicted RBP8.88□□□□□ -0.99
VPS4B-206ENST00000591475 MBD3L3A6NE82 208 aaPredicted RBP8.88□□□□□ -0.99
VPS4B-206ENST00000591475 MBD3L5A6NJ08 208 aaPredicted RBP8.88□□□□□ -0.99
VPS4B-206ENST00000591475 GPX1P07203 203 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 FRMD6-AS1P0C7T7 363 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 CRYBB3P26998 211 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 KIR2DL2P43627 348 aaPredicted RBP8.88□□□□□ -0.99
VPS4B-206ENST00000591475 TIGITQ495A1 244 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 OR10J3Q5JRS4 329 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 VWA1Q6PCB0 445 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 PQLC2Q6ZP29 291 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 C1orf229Q6ZS94 237 aaPredicted RBP8.88□□□□□ -0.99
VPS4B-206ENST00000591475 GCSAMQ8N6F7 178 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 ST6GALNAC3Q8NDV1 305 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 OR4B1Q8NGF8 309 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 MBD3L2Q8NHZ7 208 aaPredicted RBP8.88□□□□□ -0.99
VPS4B-206ENST00000591475 ADTRPQ96IZ2 230 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 SLC35E1Q96K37 410 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 NABP2Q9BQ15 211 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 HINT2Q9BX68 163 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 IDI2-AS1Q9NZ38 188 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 OR51B2Q9Y5P1 312 aa8.88□□□□□ -0.99
VPS4B-206ENST00000591475 TANC2Q9HCD6 1990 aa8.87□□□□□ -0.99
VPS4B-206ENST00000591475 SAA2-SAA4A0A096LPE2 208 aa8.87□□□□□ -0.99
VPS4B-206ENST00000591475 IGHV1-18A0A0C4DH31 117 aa8.87□□□□□ -0.99
VPS4B-206ENST00000591475 DLEU1O43261 78 aa8.87□□□□□ -0.99
VPS4B-206ENST00000591475 OR5G3P0C626 314 aa8.87□□□□□ -0.99
VPS4B-206ENST00000591475 SAA2P0DJI9 122 aaPredicted RBP8.87□□□□□ -0.99
VPS4B-206ENST00000591475 CFHR2P36980 270 aa8.87□□□□□ -0.99
VPS4B-206ENST00000591475 COMPP49747 757 aaPredicted RBP8.87□□□□□ -0.99
VPS4B-206ENST00000591475 KRTDAPP60985 99 aa8.87□□□□□ -0.99
VPS4B-206ENST00000591475 RBPJQ06330 500 aa8.87□□□□□ -0.99
VPS4B-206ENST00000591475 LY6DQ14210 128 aa8.87□□□□□ -0.99
VPS4B-206ENST00000591475 C1orf185Q5T7R7 199 aa8.87□□□□□ -0.99
VPS4B-206ENST00000591475 C9orf106Q8NAJ2 232 aa8.87□□□□□ -0.99
VPS4B-206ENST00000591475 ZNRF1Q8ND25 227 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms