RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 SLC25A6P12236 298 aa14.88□□□□□ -0.03
DDX39A-214ENST00000590556 HOXA1P49639 335 aaPredicted RBP14.88□□□□□ -0.03
DDX39A-214ENST00000590556 ERHP84090 104 aaKnown RBP14.88□□□□□ -0.03
DDX39A-214ENST00000590556 C12orf45Q8N5I9 185 aaPredicted RBP14.88□□□□□ -0.03
DDX39A-214ENST00000590556 UXS1Q8NBZ7 420 aa14.88□□□□□ -0.03
DDX39A-214ENST00000590556 TRBV9A0A0B4J1U6 114 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 C13orf42A0A1B0GVH6 325 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 CYB5BO43169 146 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 NXPH3O95157 252 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 HIST1H1BP16401 226 aaKnown RBP14.87□□□□□ -0.03
DDX39A-214ENST00000590556 RHOGP84095 191 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 DEFA5Q01523 94 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 PDLIM3Q53GG5 364 aaPredicted RBP14.87□□□□□ -0.03
DDX39A-214ENST00000590556 C8orf86Q6ZUL3 223 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 OR2C3Q8N628 320 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 NECAP1Q8NC96 275 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 OR4F17Q8NGA8 305 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 C4orf3Q8WVX3 66 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 USMG5Q96IX5 58 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 FANCD2OSQ96PS1 177 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 OR5B12Q96R08 314 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 OR4F4Q96R69 305 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 GNB4Q9HAV0 340 aa14.87□□□□□ -0.03
DDX39A-214ENST00000590556 FAM223BA6NKX1 122 aa14.86□□□□□ -0.03
DDX39A-214ENST00000590556 CEBPZOSA8MTT3 80 aa14.86□□□□□ -0.03
DDX39A-214ENST00000590556 PITX3O75364 302 aa14.86□□□□□ -0.03
DDX39A-214ENST00000590556 OR2J3O76001 311 aa14.86□□□□□ -0.03
DDX39A-214ENST00000590556 IGHV3-11P01762 117 aa14.86□□□□□ -0.03
DDX39A-214ENST00000590556 FAM223AQ8IWN6 122 aa14.86□□□□□ -0.03
DDX39A-214ENST00000590556 HSPB7Q9UBY9 170 aa14.86□□□□□ -0.03
DDX39A-214ENST00000590556 FBXL7Q9UJT9 491 aa14.86□□□□□ -0.03
DDX39A-214ENST00000590556 F11RQ9Y624 299 aaKnown RBP14.86□□□□□ -0.03
DDX39A-214ENST00000590556 IGLV11-55A0A075B6I3 123 aa14.85□□□□□ -0.03
DDX39A-214ENST00000590556 SNRPGP15A8MWD9 76 aa14.85□□□□□ -0.03
DDX39A-214ENST00000590556 INS-IGF2F8WCM5 200 aa14.85□□□□□ -0.03
DDX39A-214ENST00000590556 TSPAN15O95858 294 aa14.85□□□□□ -0.03
DDX39A-214ENST00000590556 SNCAP37840 140 aa14.85□□□□□ -0.03
DDX39A-214ENST00000590556 ATP5G2Q06055 141 aa14.85□□□□□ -0.03
DDX39A-214ENST00000590556 TNFRSF9Q07011 255 aa14.85□□□□□ -0.03
DDX39A-214ENST00000590556 RGS21Q2M5E4 152 aa14.85□□□□□ -0.03
DDX39A-214ENST00000590556 KLK9Q2XQG4 91 aa14.85□□□□□ -0.03
DDX39A-214ENST00000590556 SLC25A24Q6NUK1 477 aa14.85□□□□□ -0.03
DDX39A-214ENST00000590556 OR1L6Q8NGR2 347 aa14.85□□□□□ -0.03
DDX39A-214ENST00000590556 KLK9Q9UKQ9 250 aa14.85□□□□□ -0.03
DDX39A-214ENST00000590556 WNK1Q9H4A3 2382 aa14.85□□□□□ -0.03
DDX39A-214ENST00000590556 MPTX1A8MV57 137 aa14.84□□□□□ -0.03
DDX39A-214ENST00000590556 NDUFB8O95169 186 aa14.84□□□□□ -0.03
DDX39A-214ENST00000590556 LGALS1P09382 135 aaKnown RBP14.84□□□□□ -0.03
DDX39A-214ENST00000590556 OR1P1Q8NH06 330 aa14.84□□□□□ -0.03
DDX39A-214ENST00000590556 P2RX4Q99571 388 aa14.84□□□□□ -0.03
DDX39A-214ENST00000590556 RBKSQ9H477 322 aa14.84□□□□□ -0.03
DDX39A-214ENST00000590556 HEYLQ9NQ87 328 aaPredicted RBP14.84□□□□□ -0.03
DDX39A-214ENST00000590556 THYN1Q9P016 225 aa14.84□□□□□ -0.03
DDX39A-214ENST00000590556 DMRT1Q9Y5R6 373 aa14.84□□□□□ -0.03
DDX39A-214ENST00000590556 DNHD1Q96M86 4753 aa14.84□□□□□ -0.03
DDX39A-214ENST00000590556 FAM90A26D6RGX4 464 aa14.83□□□□□ -0.04
DDX39A-214ENST00000590556 I3L521 148 aa14.83□□□□□ -0.04
DDX39A-214ENST00000590556 RUNX1Q01196 453 aa14.83□□□□□ -0.04
DDX39A-214ENST00000590556 IAH1Q2TAA2 248 aaPredicted RBP14.83□□□□□ -0.04
DDX39A-214ENST00000590556 DEFB136Q30KP8 78 aa14.83□□□□□ -0.04
DDX39A-214ENST00000590556 C15orf32Q32M92 178 aa14.83□□□□□ -0.04
DDX39A-214ENST00000590556 ZNF114Q8NC26 417 aa14.83□□□□□ -0.04
DDX39A-214ENST00000590556 HIPK2Q9H2X6 1198 aa14.83□□□□□ -0.04
DDX39A-214ENST00000590556 VWFP04275 2813 aa14.83□□□□□ -0.04
DDX39A-214ENST00000590556 FAM25EA8MYX2 175 aa14.82□□□□□ -0.04
DDX39A-214ENST00000590556 CCSO14618 274 aa14.82□□□□□ -0.04
DDX39A-214ENST00000590556 SUB1P53999 127 aaKnown RBP eCLIP14.82□□□□□ -0.04
DDX39A-214ENST00000590556 MFAP2P55001 183 aa14.82□□□□□ -0.04
DDX39A-214ENST00000590556 RAX2Q96IS3 184 aa14.82□□□□□ -0.04
DDX39A-214ENST00000590556 OR10C1Q96KK4 312 aa14.82□□□□□ -0.04
DDX39A-214ENST00000590556 C5orf51A6NDU8 294 aa14.81□□□□□ -0.04
DDX39A-214ENST00000590556 CCL24O00175 119 aa14.81□□□□□ -0.04
DDX39A-214ENST00000590556 MED6O75586 246 aa14.81□□□□□ -0.04
DDX39A-214ENST00000590556 PF4P02776 101 aa14.81□□□□□ -0.04
DDX39A-214ENST00000590556 MYCNOSP40205 109 aa14.81□□□□□ -0.04
DDX39A-214ENST00000590556 EXOSC2Q13868 293 aaKnown RBP14.81□□□□□ -0.04
DDX39A-214ENST00000590556 ZNF343Q6P1L6 599 aa14.81□□□□□ -0.04
DDX39A-214ENST00000590556 ZBTB8BQ8NAP8 495 aaPredicted RBP14.81□□□□□ -0.04
DDX39A-214ENST00000590556 OR1N2Q8NGR9 330 aa14.81□□□□□ -0.04
DDX39A-214ENST00000590556 DTD1Q8TEA8 209 aa14.81□□□□□ -0.04
DDX39A-214ENST00000590556 DUX3Q96PT4 197 aa14.81□□□□□ -0.04
DDX39A-214ENST00000590556 GSKIPQ9P0R6 139 aa14.81□□□□□ -0.04
DDX39A-214ENST00000590556 TRRAPQ9Y4A5 3859 aa14.8□□□□□ -0.04
DDX39A-214ENST00000590556 ANKRD34BA5PLL1 514 aa14.8□□□□□ -0.04
DDX39A-214ENST00000590556 RNASE2P10153 161 aaKnown RBP14.8□□□□□ -0.04
DDX39A-214ENST00000590556 HTR2BP41595 481 aa14.8□□□□□ -0.04
DDX39A-214ENST00000590556 TATDN3Q17R31 274 aa14.8□□□□□ -0.04
DDX39A-214ENST00000590556 PRR31Q5SQ13 230 aa14.8□□□□□ -0.04
DDX39A-214ENST00000590556 ETV3LQ6ZN32 361 aa14.8□□□□□ -0.04
DDX39A-214ENST00000590556 OR11H1Q8NG94 326 aa14.8□□□□□ -0.04
DDX39A-214ENST00000590556 OR4D5Q8NGN0 318 aa14.8□□□□□ -0.04
DDX39A-214ENST00000590556 DPF1Q92782 380 aa14.8□□□□□ -0.04
DDX39A-214ENST00000590556 EEF1AKMT3Q96AZ1 226 aa14.8□□□□□ -0.04
DDX39A-214ENST00000590556 MISP3Q96FF7 219 aa14.8□□□□□ -0.04
DDX39A-214ENST00000590556 CXorf58Q96LI9 332 aa14.8□□□□□ -0.04
DDX39A-214ENST00000590556 MAGT1Q9H0U3 335 aa14.8□□□□□ -0.04
DDX39A-214ENST00000590556 SSNA1O43805 119 aa14.79□□□□□ -0.04
DDX39A-214ENST00000590556 HSPB1P04792 205 aaKnown RBP14.79□□□□□ -0.04
DDX39A-214ENST00000590556 NKX2-1P43699 371 aaPredicted RBP14.79□□□□□ -0.04
DDX39A-214ENST00000590556 ID3Q02535 119 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms