RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 RTN4IP1Q8WWV3 396 aaPredicted RBP6.07□□□□□ -1.44
SMAD4-209ENST00000589941 ZNF799Q96GE5 643 aa6.07□□□□□ -1.44
SMAD4-209ENST00000589941 GPR61Q9BZJ8 451 aa6.07□□□□□ -1.44
SMAD4-209ENST00000589941 RGCCQ9H4X1 137 aa6.07□□□□□ -1.44
SMAD4-209ENST00000589941 SPACA1Q9HBV2 294 aa6.07□□□□□ -1.44
SMAD4-209ENST00000589941 RPS10P5Q9NQ39 176 aa6.07□□□□□ -1.44
SMAD4-209ENST00000589941 AK3Q9UIJ7 227 aa6.07□□□□□ -1.44
SMAD4-209ENST00000589941 PKD1P98161 4303 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 DNAH17Q9UFH2 4485 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 IGKV1-27A0A075B6S5 117 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 NPIPB5A8MRT5 1133 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 TRDCB7Z8K6 153 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 ADAM20O43506 726 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 PDCD6O75340 191 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 CLN5O75503 358 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 HSPB1P04792 205 aaKnown RBP6.06□□□□□ -1.44
SMAD4-209ENST00000589941 LIPFP07098 398 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 CST2P09228 141 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 OR5AC1P0C628 307 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 FRMD6-AS1P0C7T7 363 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 SERPINA2P20848 420 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 KITLGP21583 273 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 PCP4P48539 62 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 CAMLGP49069 296 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 EWSR1Q01844 656 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMAD4-209ENST00000589941 FABP9Q0Z7S8 132 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 ZNF266Q14584 549 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 ZNF506Q5JVG8 444 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 PRAMEF6Q5VXH4 476 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 LYZL2Q7Z4W2 148 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 TMEM217Q8N7C4 229 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 LINC00469Q8N7U9 141 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 OR13D1Q8NGV5 346 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 MAFIPQ8WZ33 124 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 IL22RA2Q969J5 263 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 SPTSSAQ969W0 71 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 SGK3Q96BR1 496 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 S100A13Q99584 98 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 HDHD3Q9BSH5 251 aaPredicted RBP6.06□□□□□ -1.44
SMAD4-209ENST00000589941 ZNF286AQ9HBT8 521 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 SLC2A9Q9NRM0 540 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 PLEKHJ1Q9NW61 149 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 PIGLQ9Y2B2 252 aa6.06□□□□□ -1.44
SMAD4-209ENST00000589941 LSM5Q9Y4Y9 91 aaKnown RBP6.06□□□□□ -1.44
SMAD4-209ENST00000589941 TSSC4Q9Y5U2 329 aaPredicted RBP6.06□□□□□ -1.44
SMAD4-209ENST00000589941 SORL1Q92673 2214 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 IGKV1-12A0A0C4DH73 117 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 hCG_38984A0A1B0GV85 526 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 NKX6-3A6NJ46 265 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 ZNF729A6NN14 1252 aaPredicted RBP6.05□□□□□ -1.44
SMAD4-209ENST00000589941 DVL1O14640 695 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 AGPAT2O15120 278 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 TGOLN2O43493 480 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 FSTL3O95633 263 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 IFNA17P01571 189 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 IGKV1D-12P01611 117 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 S100A6P06703 90 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 SNRNP70P08621 437 aaKnown RBP6.05□□□□□ -1.44
SMAD4-209ENST00000589941 SRP19P09132 144 aaKnown RBP6.05□□□□□ -1.44
SMAD4-209ENST00000589941 SLC25A6P12236 298 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 PPP1CCP36873 323 aaKnown RBP6.05□□□□□ -1.44
SMAD4-209ENST00000589941 VDAC2P45880 294 aaPredicted RBP6.05□□□□□ -1.44
SMAD4-209ENST00000589941 CDX1P47902 265 aaPredicted RBP6.05□□□□□ -1.44
SMAD4-209ENST00000589941 THBS3P49746 956 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 CD81P60033 236 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 BLCAPP62952 87 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 PSG4Q00888 419 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 BAXQ07812 192 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 OR8G1Q15617 311 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 NMSQ5H8A3 153 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 FBXW12Q6X9E4 464 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 COLCA1Q6ZS62 124 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 SLC16A13Q7RTY0 426 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 ODF3L1Q8IXM7 274 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 SAXO1Q8IYX7 474 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 DYNAPQ8N1N2 210 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 OR5D18Q8NGL1 313 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 NPRL2Q8WTW4 380 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 DUX3Q96PT4 197 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 SPIN2AQ99865 258 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 SPIN2BQ9BPZ2 258 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 TMEM222Q9H0R3 208 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 WNT5BQ9H1J7 359 aa6.05□□□□□ -1.44
SMAD4-209ENST00000589941 LYRM2Q9NU23 88 aaPredicted RBP6.05□□□□□ -1.44
SMAD4-209ENST00000589941 TRBV6-6A0A0A6YYG2 114 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 PIGBOS1A0A0B4J2F0 54 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 IGLV5-39A0A0G2JS06 123 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 hCG_1809904A0A1W2PP81 198 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 A0A1W2PR64 198 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 A0A1W2PRV1 198 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 IGSF23A1L1A6 192 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 RBFOX3A6NFN3 312 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 IFITM10A6NMD0 228 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 B4DEV8 164 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 IFNL4K9M1U5 179 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 WRBO00258 174 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 HSD17B6O14756 317 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 RAMP3O60896 148 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 NAPSAO96009 420 aa6.04□□□□□ -1.44
SMAD4-209ENST00000589941 GYPAP02724 150 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms