RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 AMMECR1Q9Y4X0 333 aaPredicted RBP12.05□□□□□ -0.48
RETREG3-208ENST00000589797 S100A8P05109 93 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 CTRB1P17538 263 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 MBNL2Q5VZF2 373 aaKnown RBP12.05□□□□□ -0.48
RETREG3-208ENST00000589797 CTRB2Q6GPI1 263 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 TMEM167BQ9NRX6 74 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 SORL1Q92673 2214 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 NAV3Q8IVL0 2385 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 LOC102723971A0A1B0GUV8 181 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 ZNF137PP52743 207 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 CARHSP1Q9Y2V2 147 aaKnown RBP12.05□□□□□ -0.48
RETREG3-208ENST00000589797 PGPA6NDG6 321 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 CGB1A6NKQ9 187 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 F2RL2O00254 374 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 GATCO43716 136 aaKnown RBP12.05□□□□□ -0.48
RETREG3-208ENST00000589797 MMP23AO75900 390 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 ICAM4Q14773 271 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 PRR31Q5SQ13 230 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 LEMD1Q68G75 181 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 ETFRF1Q6IPR1 90 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 ARHGAP32A7KAX9 2087 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 SLC17A3O00476 420 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 DLL1O00548 723 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 CLN5O75503 358 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 MC5RP33032 325 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 MST1LQ2TV78 715 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 TMEM18Q96B42 140 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 CLEC7AQ9BXN2 247 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 LY86O95711 162 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 MIR17HGQ75NE6 70 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 OR4F17Q8NGA8 305 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 LOC105371242A0A075B767 164 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 LOC105371267A0A1B0GV96 52 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 FOXI3A8MTJ6 420 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-208ENST00000589797 DHRS7BQ6IAN0 325 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-208ENST00000589797 S100A7AQ86SG5 101 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 MIOXQ9UGB7 285 aa12.04□□□□□ -0.48
RETREG3-208ENST00000589797 SNURFLB1AK76 121 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 SRSF4Q08170 494 aaKnown RBP12.03□□□□□ -0.48
RETREG3-208ENST00000589797 LY6EQ16553 131 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 TMEM200BQ69YZ2 307 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 ANAPC10Q9UM13 185 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 LINC00312Q9Y6C7 94 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 ACAA1P09110 424 aaPredicted RBP12.03□□□□□ -0.48
RETREG3-208ENST00000589797 USF1P22415 310 aaPredicted RBP12.03□□□□□ -0.48
RETREG3-208ENST00000589797 NUBP1P53384 320 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 MMD2Q8IY49 270 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 SIGLECL1Q8N7X8 197 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 OR2D3Q8NGH3 330 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 BTF3L4Q96K17 158 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 DNAJC4Q9NNZ3 241 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 SCO2A0A1W2PP80 73 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 PDE6DO43924 150 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 HSBP1O75506 76 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 GRNP28799 593 aaKnown RBP12.03□□□□□ -0.48
RETREG3-208ENST00000589797 ARL3P36405 182 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 ZNF506Q5JVG8 444 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 TMEM186Q96B77 213 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 PSMG3Q9BT73 122 aaPredicted RBP12.03□□□□□ -0.48
RETREG3-208ENST00000589797 COL25A1Q9BXS0 654 aaPredicted RBP12.03□□□□□ -0.48
RETREG3-208ENST00000589797 HSPB7Q9UBY9 170 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 CENPEQ02224 2701 aa12.03□□□□□ -0.48
RETREG3-208ENST00000589797 JMJD1CQ15652 2540 aa12.02□□□□□ -0.48
RETREG3-208ENST00000589797 HYPMO75409 117 aa12.02□□□□□ -0.48
RETREG3-208ENST00000589797 MPDU1O75352 247 aa12.02□□□□□ -0.49
RETREG3-208ENST00000589797 LIPFP07098 398 aa12.02□□□□□ -0.49
RETREG3-208ENST00000589797 IGFBPL1Q8WX77 278 aa12.02□□□□□ -0.49
RETREG3-208ENST00000589797 MBNL3Q9NUK0 354 aaKnown RBP12.02□□□□□ -0.49
RETREG3-208ENST00000589797 RPUSD1Q9UJJ7 312 aaKnown RBP12.02□□□□□ -0.49
RETREG3-208ENST00000589797 ZNF253O75346 499 aa12.02□□□□□ -0.49
RETREG3-208ENST00000589797 CD5P06127 495 aa12.02□□□□□ -0.49
RETREG3-208ENST00000589797 COL8A2P25067 703 aa12.02□□□□□ -0.49
RETREG3-208ENST00000589797 FCGR2BP31994 310 aaPredicted RBP12.02□□□□□ -0.49
RETREG3-208ENST00000589797 ZNF134P52741 427 aa12.02□□□□□ -0.49
RETREG3-208ENST00000589797 ZNF383Q8NA42 475 aa12.02□□□□□ -0.49
RETREG3-208ENST00000589797 MAP1AP78559 2803 aaPredicted RBP12.02□□□□□ -0.49
RETREG3-208ENST00000589797 GRIFINA4D1Z8 144 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 NDUFA2O43678 99 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 GCHFRP30047 84 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 ERVK11-1P61568 191 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 DPPA3Q6W0C5 159 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 AAMDCQ9H7C9 122 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 IGKV1D-33P01593 117 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 IGKV1-33P01594 117 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 PLA2G5P39877 138 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 PPOXP50336 477 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 MFAP2P55001 183 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 PAX9P55771 341 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 SPATA31B1PQ5VZV4 182 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 VKORC1Q9BQB6 163 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 GSX1Q9H4S2 264 aaPredicted RBP12.01□□□□□ -0.49
RETREG3-208ENST00000589797 SELENOKQ9Y6D0 94 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 SPTBN5Q9NRC6 3674 aaKnown RBP12.01□□□□□ -0.49
RETREG3-208ENST00000589797 CRISP2P16562 243 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 TOMM20LQ6UXN7 152 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 THYN1Q9P016 225 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 B4DEV8 164 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 E7EQL1 145 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 TM4SF5O14894 197 aa12.01□□□□□ -0.49
RETREG3-208ENST00000589797 TRGC1P0CF51 173 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms