RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 ZNF728P0DKX0 622 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 IGHV4-38-2P0DP08 117 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 CXCL3P19876 107 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 CEBPGP53567 150 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 OR2B8PP59922 312 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 S100A10P60903 97 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 PPP1R1AQ13522 171 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF146Q15072 292 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 DEFB113Q30KQ7 82 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 RNF212Q495C1 297 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 FFAR4Q5NUL3 377 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 STPG4Q8N801 248 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 GDPD1Q8N9F7 314 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 OR13C8Q8NGS7 320 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 STOML3Q8TAV4 291 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 PCNPQ8WW12 178 aaKnown RBP2.61□□□□□ -1.99
ZNF540-207ENST00000589285 C10orf35Q96D05 121 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF714Q96N38 554 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 CITED2Q99967 270 aaPredicted RBP2.61□□□□□ -1.99
ZNF540-207ENST00000589285 TLNRD1Q9H1K6 362 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 C20orf85Q9H1P6 137 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 DPAGT1Q9H3H5 408 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 YAE1D1Q9NRH1 226 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 CACNG5Q9UF02 275 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 VSIG4Q9Y279 399 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 IGHV3-35A0A0C4DH35 117 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 SERPINE3A8MV23 424 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 SIGLEC5O15389 551 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 LHBP01229 141 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 ARG1P05089 322 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 OR5AC1P0C628 307 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 CNTFRP26992 372 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 BTCP35070 178 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 FHITP49789 147 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 TMEM33P57088 247 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 TAS2R19P59542 299 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 NUTF2P61970 127 aaKnown RBP2.6□□□□□ -1.99
ZNF540-207ENST00000589285 MZT1Q08AG7 82 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 PLGLAQ15195 96 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 ACTBL2Q562R1 376 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 C10orf55Q5SWW7 151 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 TCF23Q7RTU1 214 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 Q8IYB0 196 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 ABHD12Q8N2K0 398 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 FAM89BQ8N5H3 189 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 RTN4IP1Q8WWV3 396 aaPredicted RBP2.6□□□□□ -1.99
ZNF540-207ENST00000589285 Q9N2K0 584 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 RPUSD1Q9UJJ7 312 aaKnown RBP2.6□□□□□ -1.99
ZNF540-207ENST00000589285 SCP2D1Q9UJQ7 156 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 PKD1L1Q8TDX9 2849 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 DSCAML1Q8TD84 2053 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 IGHV3OR16-8A0A075B7F1 116 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 TRAV34A0A0B4J273 112 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 hADV38S2A0JD32 116 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 ANKRD20A5PA0PJZ0 165 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 PMS2P5A8MQ11 134 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 A8MXK9 166 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 DISC1C4P0D8 188 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 TEX46H3BTG2 121 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 GOSR2O14653 212 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 SOX15O60248 233 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 IFNA7P01567 189 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 IGKV1-16P04430 117 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 REG1AP05451 166 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 STAG3L2P0CL84 134 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 MUC1P15941 1255 aaPredicted RBP2.6□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF25P17030 456 aaPredicted RBP2.6□□□□□ -1.99
ZNF540-207ENST00000589285 USF1P22415 310 aaPredicted RBP2.6□□□□□ -1.99
ZNF540-207ENST00000589285 ZBTB25P24278 435 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 CD1BP29016 333 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 S100A7P31151 101 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 G6PCP35575 357 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 KRTAP10-6P60371 365 aaPredicted RBP2.6□□□□□ -1.99
ZNF540-207ENST00000589285 RBX1P62877 108 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 RPL30P62888 115 aaKnown RBP2.6□□□□□ -1.99
ZNF540-207ENST00000589285 HLA-DRB3P79483 266 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 PJVKQ0ZLH3 352 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 SCGB2A2Q13296 93 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 EXOSC2Q13868 293 aaKnown RBP2.6□□□□□ -1.99
ZNF540-207ENST00000589285 FCN2Q15485 313 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 MPV17LQ2QL34 196 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 CT45A1Q5HYN5 189 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 LDLRAD2Q5SZI1 272 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF497Q6ZNH5 498 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 LYZL2Q7Z4W2 148 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 VMO1Q7Z5L0 202 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 C12orf45Q8N5I9 185 aaPredicted RBP2.6□□□□□ -1.99
ZNF540-207ENST00000589285 SPICQ8N5J4 248 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 KIR3DL3Q8N743 410 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 OR10A7Q8NGE5 316 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 TERB2Q8NHR7 220 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 CT45A3Q8NHU0 189 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 MRGPRFQ96AM1 343 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 C17orf77Q96MU5 243 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 TOLLIPQ9H0E2 274 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 C5orf66Q9H5L9 145 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 SLC2A9Q9NRM0 540 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 GHRLQ9UBU3 117 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 UBQLN2Q9UHD9 624 aa2.6□□□□□ -1.99
ZNF540-207ENST00000589285 A0A0A6YYH2 397 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms