RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 GLYATL2Q8WU03 294 aa12.28□□□□□ -0.44
RETREG3-206ENST00000588423 GALNT14Q96FL9 552 aa12.28□□□□□ -0.44
RETREG3-206ENST00000588423 CCDC140Q96MF4 163 aa12.28□□□□□ -0.44
RETREG3-206ENST00000588423 HINT2Q9BX68 163 aa12.28□□□□□ -0.44
RETREG3-206ENST00000588423 SIGLEC8Q9NYZ4 499 aa12.28□□□□□ -0.44
RETREG3-206ENST00000588423 ZNF256Q9Y2P7 627 aaPredicted RBP12.28□□□□□ -0.44
RETREG3-206ENST00000588423 PRKDCP78527 4128 aaKnown RBP12.27□□□□□ -0.44
RETREG3-206ENST00000588423 MECP2P51608 486 aaKnown RBP12.27□□□□□ -0.45
RETREG3-206ENST00000588423 IL34Q6ZMJ4 242 aa12.27□□□□□ -0.45
RETREG3-206ENST00000588423 SGPP2Q8IWX5 399 aa12.27□□□□□ -0.45
RETREG3-206ENST00000588423 ZNF114Q8NC26 417 aa12.27□□□□□ -0.45
RETREG3-206ENST00000588423 S100ZQ8WXG8 99 aa12.27□□□□□ -0.45
RETREG3-206ENST00000588423 RBPMSQ93062 196 aaKnown RBP12.27□□□□□ -0.45
RETREG3-206ENST00000588423 RRNAD1Q96FB5 475 aaKnown RBP12.27□□□□□ -0.45
RETREG3-206ENST00000588423 ATP6V0BQ99437 205 aa12.27□□□□□ -0.45
RETREG3-206ENST00000588423 PEMTQ9UBM1 199 aa12.27□□□□□ -0.45
RETREG3-206ENST00000588423 KCNIP3Q9Y2W7 256 aa12.27□□□□□ -0.45
RETREG3-206ENST00000588423 A0A0B4J293 547 aa12.26□□□□□ -0.45
RETREG3-206ENST00000588423 MFSD2BA6NFX1 497 aa12.26□□□□□ -0.45
RETREG3-206ENST00000588423 INS-IGF2F8WCM5 200 aa12.26□□□□□ -0.45
RETREG3-206ENST00000588423 ARL3P36405 182 aa12.26□□□□□ -0.45
RETREG3-206ENST00000588423 SLC25A24Q6NUK1 477 aa12.26□□□□□ -0.45
RETREG3-206ENST00000588423 OR2C3Q8N628 320 aa12.26□□□□□ -0.45
RETREG3-206ENST00000588423 OR1P1Q8NH06 330 aa12.26□□□□□ -0.45
RETREG3-206ENST00000588423 ZNF502Q8TBZ5 544 aa12.26□□□□□ -0.45
RETREG3-206ENST00000588423 IL22RA2Q969J5 263 aa12.26□□□□□ -0.45
RETREG3-206ENST00000588423 TMEM230Q96A57 120 aa12.26□□□□□ -0.45
RETREG3-206ENST00000588423 SLC25A21Q9BQT8 299 aaPredicted RBP12.26□□□□□ -0.45
RETREG3-206ENST00000588423 TMEM56-RWDD3S4R434 201 aa12.26□□□□□ -0.45
RETREG3-206ENST00000588423 PPP5D1E7EU14 171 aa12.25□□□□□ -0.45
RETREG3-206ENST00000588423 LGALS9O00182 355 aa12.25□□□□□ -0.45
RETREG3-206ENST00000588423 IGLV1-51P01701 117 aa12.25□□□□□ -0.45
RETREG3-206ENST00000588423 MFAP2P55001 183 aa12.25□□□□□ -0.45
RETREG3-206ENST00000588423 IZUMO4Q1ZYL8 232 aa12.25□□□□□ -0.45
RETREG3-206ENST00000588423 AARDQ4LEZ3 155 aa12.25□□□□□ -0.45
RETREG3-206ENST00000588423 CLEC19AQ6UXS0 136 aa12.25□□□□□ -0.45
RETREG3-206ENST00000588423 GPHB5Q86YW7 130 aa12.25□□□□□ -0.45
RETREG3-206ENST00000588423 SELENOHQ8IZQ5 122 aaKnown RBP12.25□□□□□ -0.45
RETREG3-206ENST00000588423 RNASE11Q8TAA1 199 aaKnown RBP12.25□□□□□ -0.45
RETREG3-206ENST00000588423 LHFPL5Q8TAF8 219 aa12.25□□□□□ -0.45
RETREG3-206ENST00000588423 PDCD10Q9BUL8 212 aa12.25□□□□□ -0.45
RETREG3-206ENST00000588423 PLEKHA3Q9HB20 300 aa12.25□□□□□ -0.45
RETREG3-206ENST00000588423 PIGBOS1A0A0B4J2F0 54 aa12.24□□□□□ -0.45
RETREG3-206ENST00000588423 A0A0G2JRQ6 117 aa12.24□□□□□ -0.45
RETREG3-206ENST00000588423 ST8SIA3O43173 380 aa12.24□□□□□ -0.45
RETREG3-206ENST00000588423 IGHV3-23P01764 117 aa12.24□□□□□ -0.45
RETREG3-206ENST00000588423 CLEC3BP05452 202 aa12.24□□□□□ -0.45
RETREG3-206ENST00000588423 CSN3P07498 182 aa12.24□□□□□ -0.45
RETREG3-206ENST00000588423 ERHP84090 104 aaKnown RBP12.24□□□□□ -0.45
RETREG3-206ENST00000588423 TMEM187Q14656 261 aa12.24□□□□□ -0.45
RETREG3-206ENST00000588423 DEFB121Q5J5C9 76 aa12.24□□□□□ -0.45
RETREG3-206ENST00000588423 PRR25Q96S07 402 aa12.24□□□□□ -0.45
RETREG3-206ENST00000588423 S4R3C0 116 aa12.24□□□□□ -0.45
RETREG3-206ENST00000588423 NAP1L6A6NFF2 107 aa12.23□□□□□ -0.45
RETREG3-206ENST00000588423 OR2C1O95371 312 aa12.23□□□□□ -0.45
RETREG3-206ENST00000588423 ANXA3P12429 323 aa12.23□□□□□ -0.45
RETREG3-206ENST00000588423 SPNP16150 400 aa12.23□□□□□ -0.45
RETREG3-206ENST00000588423 SUPT4H1P63272 117 aaKnown RBP12.23□□□□□ -0.45
RETREG3-206ENST00000588423 BAK1Q16611 211 aa12.23□□□□□ -0.45
RETREG3-206ENST00000588423 TMEM268Q5VZI3 342 aa12.23□□□□□ -0.45
RETREG3-206ENST00000588423 ZNF57Q68EA5 555 aaPredicted RBP12.23□□□□□ -0.45
RETREG3-206ENST00000588423 SLC35G3Q8N808 338 aa12.23□□□□□ -0.45
RETREG3-206ENST00000588423 OR52E5Q8NH55 327 aa12.23□□□□□ -0.45
RETREG3-206ENST00000588423 SDHCQ99643 169 aaPredicted RBP12.23□□□□□ -0.45
RETREG3-206ENST00000588423 LSM4Q9Y4Z0 139 aaKnown RBP12.23□□□□□ -0.45
RETREG3-206ENST00000588423 K7EIM0 57 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 LY86O95711 162 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 IFNA17P01571 189 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 HLA-AP01891 365 aaKnown RBP12.22□□□□□ -0.45
RETREG3-206ENST00000588423 GP9P14770 177 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 AKR1C4P17516 323 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 INPP1P49441 399 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 SRPXP78539 464 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 ZNF846Q147U1 533 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 FAM106AQ4KMX7 169 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 TMEM128Q5BJH2 165 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 TRIQKQ629K1 86 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 Q6ZRM9 215 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 OR2K2Q8NGT1 345 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 SCARB1Q8WTV0 552 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 BSCL2Q96G97 398 aaPredicted RBP12.22□□□□□ -0.45
RETREG3-206ENST00000588423 WDR12Q9GZL7 423 aaKnown RBP12.22□□□□□ -0.45
RETREG3-206ENST00000588423 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.22□□□□□ -0.45
RETREG3-206ENST00000588423 C21orf62Q9NYP8 219 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 CACFD1Q9UGQ2 172 aa12.22□□□□□ -0.45
RETREG3-206ENST00000588423 A0A0B4J2A0 478 aa12.21□□□□□ -0.45
RETREG3-206ENST00000588423 A8MWP6 167 aa12.21□□□□□ -0.45
RETREG3-206ENST00000588423 FCGR2BP31994 310 aaPredicted RBP12.21□□□□□ -0.45
RETREG3-206ENST00000588423 GPR183P32249 361 aa12.21□□□□□ -0.45
RETREG3-206ENST00000588423 SPCS3P61009 180 aa12.21□□□□□ -0.45
RETREG3-206ENST00000588423 RBMS2Q15434 407 aaKnown RBP12.21□□□□□ -0.45
RETREG3-206ENST00000588423 SPSB3Q6PJ21 355 aa12.21□□□□□ -0.45
RETREG3-206ENST00000588423 PLET1Q6UQ28 207 aa12.21□□□□□ -0.45
RETREG3-206ENST00000588423 GPR146Q96CH1 333 aa12.21□□□□□ -0.45
RETREG3-206ENST00000588423 GAR1Q9NY12 217 aaKnown RBP12.21□□□□□ -0.45
RETREG3-206ENST00000588423 SHPKQ9UHJ6 478 aa12.21□□□□□ -0.45
RETREG3-206ENST00000588423 I3L2K1 104 aa12.2□□□□□ -0.46
RETREG3-206ENST00000588423 TGOLN2O43493 480 aa12.2□□□□□ -0.46
RETREG3-206ENST00000588423 SNCAP37840 140 aa12.2□□□□□ -0.46
RETREG3-206ENST00000588423 PVRIGQ6DKI7 326 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms