RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 CX3CL1P78423 397 aa9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 ERHP84090 104 aaKnown RBP9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 ZNF266Q14584 549 aa9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 FXYD3Q14802 87 aa9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 ATP6V1FQ16864 119 aa9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 OR8G2PQ6IF36 304 aa9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 ETV3LQ6ZN32 361 aa9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 C16orf82Q7Z2V1 217 aa9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 TMEM219Q86XT9 240 aa9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 BAP18Q8IXM2 172 aa9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 OR10P1Q8NGE3 313 aa9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 ARPC1AQ92747 370 aa9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 PINX1Q96BK5 328 aaKnown RBP9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 PHYHIPLQ96FC7 376 aa9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 ZNF48Q96MX3 618 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 RASL11BQ9BPW5 248 aa9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 GINS3Q9BRX5 216 aa9.45□□□□□ -0.9
TNFRSF11A-203ENST00000587697 CNIH1O95406 144 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 IFNA7P01567 189 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 OR13C7P0DN81 318 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 AREGP15514 252 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 SNCAP37840 140 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 IER3P46695 156 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 DLK1P80370 383 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 Q6YL49 198 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 LILRB2Q8N423 598 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 SCARB1Q8WTV0 552 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 SSMEM1Q8WWF3 244 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 P2RX4Q99571 388 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 HSPB9Q9BQS6 159 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 TMEM147Q9BVK8 224 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 GGACTQ9BVM4 153 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 PARD6GQ9BYG4 376 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 PITPNC1Q9UKF7 332 aa9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 PAIP2BQ9ULR5 123 aaKnown RBP9.44□□□□□ -0.9
TNFRSF11A-203ENST00000587697 TLN2Q9Y4G6 2542 aa9.43□□□□□ -0.9
TNFRSF11A-203ENST00000587697 FNDC10F2Z333 226 aa9.43□□□□□ -0.9
TNFRSF11A-203ENST00000587697 IGHV4-59P01825 116 aa9.43□□□□□ -0.9
TNFRSF11A-203ENST00000587697 REG1AP05451 166 aa9.43□□□□□ -0.9
TNFRSF11A-203ENST00000587697 MDKP21741 143 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF11A-203ENST00000587697 LY6EQ16553 131 aa9.43□□□□□ -0.9
TNFRSF11A-203ENST00000587697 ASPHD1Q5U4P2 390 aa9.43□□□□□ -0.9
TNFRSF11A-203ENST00000587697 ALKAL2Q6UX46 152 aa9.43□□□□□ -0.9
TNFRSF11A-203ENST00000587697 OR5R1Q8NH85 324 aa9.43□□□□□ -0.9
TNFRSF11A-203ENST00000587697 C22orf15Q8WYQ4 148 aa9.43□□□□□ -0.9
TNFRSF11A-203ENST00000587697 TMEM160Q9NX00 188 aa9.43□□□□□ -0.9
TNFRSF11A-203ENST00000587697 UBQLN2Q9UHD9 624 aa9.43□□□□□ -0.9
TNFRSF11A-203ENST00000587697 FBXO7Q9Y3I1 522 aa9.43□□□□□ -0.9
TNFRSF11A-203ENST00000587697 ACANP16112 2415 aa9.43□□□□□ -0.9
TNFRSF11A-203ENST00000587697 CELSR1Q9NYQ6 3014 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 UBE2L5PA0A1B0GUS4 154 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 NPIPB5A8MRT5 1133 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 M0QZK8 103 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 IFNA4P05014 189 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 CRYGCP07315 174 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 APELAP0DMC3 54 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 SPP1P10451 314 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 EGR2P11161 476 aaPredicted RBP9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 CTRB1P17538 263 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 SUB1P53999 127 aaKnown RBP eCLIP9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 MFAP2P55001 183 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 CTRB2Q6GPI1 263 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 SPNS3Q6ZMD2 512 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 IL17RELQ6ZVW7 336 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 OR1P1Q8NH06 330 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 RNASEH2CQ8TDP1 164 aaKnown RBP9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 ABHD5Q8WTS1 349 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 FAM103A1Q9BTL3 118 aaKnown RBP9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 YAE1D1Q9NRH1 226 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 UQCC1Q9NVA1 299 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 F11RQ9Y624 299 aaKnown RBP9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 CSMD1Q96PZ7 3565 aa9.42□□□□□ -0.9
TNFRSF11A-203ENST00000587697 BAHCC1Q9P281 2608 aa9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 FBXO24O75426 580 aa9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 IFNA5P01569 189 aa9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 SEC11BP0C7V7 166 aa9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 ATP6V0CP27449 155 aa9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 CRIP2P52943 208 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 CD69Q07108 199 aa9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 ARSJQ5FYB0 599 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 C19orf35Q6ZS72 473 aa9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 HSD17B11Q8NBQ5 300 aa9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 SGMS2Q8NHU3 365 aa9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 TMED6Q8WW62 240 aa9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 WDR61Q9GZS3 305 aaKnown RBP9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 VPREB3Q9UKI3 123 aa9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 WDR83OSQ9Y284 106 aa9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 DMRT1Q9Y5R6 373 aa9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 OTOGQ6ZRI0 2925 aa9.41□□□□□ -0.9
TNFRSF11A-203ENST00000587697 RPS10-NUDT3A0A1W2PQS6 291 aa9.4□□□□□ -0.9
TNFRSF11A-203ENST00000587697 SH2D7A6NKC9 451 aaPredicted RBP9.4□□□□□ -0.9
TNFRSF11A-203ENST00000587697 ATP6V0E1O15342 81 aa9.4□□□□□ -0.9
TNFRSF11A-203ENST00000587697 GPX4P36969 197 aaPredicted RBP9.4□□□□□ -0.9
TNFRSF11A-203ENST00000587697 RUNX1Q01196 453 aa9.4□□□□□ -0.9
TNFRSF11A-203ENST00000587697 KLK9Q2XQG4 91 aa9.4□□□□□ -0.9
TNFRSF11A-203ENST00000587697 C19orf54Q5BKX5 351 aa9.4□□□□□ -0.9
TNFRSF11A-203ENST00000587697 FAM74A1Q5RGS3 127 aa9.4□□□□□ -0.9
TNFRSF11A-203ENST00000587697 EIF5AL1Q6IS14 154 aaKnown RBP9.4□□□□□ -0.9
TNFRSF11A-203ENST00000587697 SLC16A13Q7RTY0 426 aa9.4□□□□□ -0.9
TNFRSF11A-203ENST00000587697 CENPVQ7Z7K6 275 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms