RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-215	ENST00000586884	TMEM56	Q96MV1	263 aa		11.24	□□□□□ -0.61
MBD1-215	ENST00000586884	IFT46	Q9NQC8	304 aa		11.24	□□□□□ -0.61
MBD1-215	ENST00000586884	FKBP11	Q9NYL4	201 aa		11.24	□□□□□ -0.61
MBD1-215	ENST00000586884	EHF	Q9NZC4	300 aa		11.24	□□□□□ -0.61
MBD1-215	ENST00000586884	SMPX	Q9UHP9	88 aa		11.24	□□□□□ -0.61
MBD1-215	ENST00000586884	IGHV3OR16-8	A0A075B7F1	116 aa		11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	IGHV7-4-1	A0A0J9YVY3	117 aa		11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	ZNF207	O43670	478 aa	Known RBP	11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	KRAS	P01116	189 aa		11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	CTSG	P08311	255 aa		11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	FCGR2B	P31994	310 aa	Predicted RBP	11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	LPAR6	P43657	344 aa		11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	CMTM1	Q8IZ96	169 aa		11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	TSPAN14	Q8NG11	270 aa		11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	FCAMR	Q8WWV6	532 aa		11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	DGCR14	Q96DF8	476 aa	Known RBP	11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	RNF2	Q99496	336 aa		11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	YTHDF1	Q9BYJ9	559 aa	Known RBP	11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	CSTL1	Q9H114	145 aa		11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	PRND	Q9UKY0	176 aa		11.23	□□□□□ -0.61
MBD1-215	ENST00000586884	LOC100506127	A0A0U1RQW1	187 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	MEIS3P1	A6NDR6	274 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	MPTX1	A8MV57	137 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	CHEK1	O14757	476 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	NUPL2	O15504	423 aa	Known RBP	11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	XRCC3	O43542	346 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	G6PC	P35575	357 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	APRG1	Q8IVJ8	170 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	TMEM116	Q8NCL8	245 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	OR1P1	Q8NH06	330 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	OR10C1	Q96KK4	312 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	TSC22D3	Q99576	134 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	RHPN1-AS1	Q9BWJ2	59 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	MFF	Q9GZY8	342 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	RNF167	Q9H6Y7	350 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	ANAPC10	Q9UM13	185 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	NSG2	Q9Y328	171 aa		11.22	□□□□□ -0.61
MBD1-215	ENST00000586884	RFX2	P48378	723 aa		11.21	□□□□□ -0.61
MBD1-215	ENST00000586884	TAS2R46	P59540	309 aa		11.21	□□□□□ -0.61
MBD1-215	ENST00000586884	S100A16	Q96FQ6	103 aa	Known RBP	11.21	□□□□□ -0.61
MBD1-215	ENST00000586884	CMTM3	Q96MX0	182 aa		11.21	□□□□□ -0.61
MBD1-215	ENST00000586884	TXN2	Q99757	166 aa		11.21	□□□□□ -0.61
MBD1-215	ENST00000586884	RARRES2	Q99969	163 aa		11.21	□□□□□ -0.61
MBD1-215	ENST00000586884	C11orf68	Q9H3H3	251 aa	Known RBP	11.21	□□□□□ -0.61
MBD1-215	ENST00000586884		Q9H521	79 aa		11.21	□□□□□ -0.61
MBD1-215	ENST00000586884	TMEM14B	Q9NUH8	114 aa		11.21	□□□□□ -0.61
MBD1-215	ENST00000586884	C15orf61	A6NNL5	157 aa		11.2	□□□□□ -0.62
MBD1-215	ENST00000586884	GPR31	O00270	319 aa		11.2	□□□□□ -0.62
MBD1-215	ENST00000586884	DEDD	O75618	318 aa		11.2	□□□□□ -0.62
MBD1-215	ENST00000586884	YIF1A	O95070	293 aa		11.2	□□□□□ -0.62
MBD1-215	ENST00000586884	MFAP4	P55083	255 aa		11.2	□□□□□ -0.62
MBD1-215	ENST00000586884	CROCCP3	Q8IVE0	287 aa		11.2	□□□□□ -0.62
MBD1-215	ENST00000586884	OR5H2	Q8NGV7	314 aa		11.2	□□□□□ -0.62
MBD1-215	ENST00000586884	SLC25A46	Q96AG3	418 aa		11.2	□□□□□ -0.62
MBD1-215	ENST00000586884	ZNF414	Q96IQ9	312 aa		11.2	□□□□□ -0.62
MBD1-215	ENST00000586884	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.2	□□□□□ -0.62
MBD1-215	ENST00000586884	DNAH10	Q8IVF4	4471 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	HERC2	O95714	4834 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	TRAV14DV4	A0A0A6YYC5	116 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884		I3L2K1	104 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	PMP2	P02689	132 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	IFNA4	P05014	189 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	CD5	P06127	495 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	NAT1	P18440	290 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	TFPI2	P48307	235 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	PAFAH1B2	P68402	229 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	ZNF124	Q15973	351 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	UBE2NL	Q5JXB2	153 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	FAM90A2P	Q658T7	463 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	ZNF114	Q8NC26	417 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	OR6F1	Q8NGZ6	308 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	C11orf45	Q8TAV5	145 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	MISP3	Q96FF7	219 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	NXF2	Q9GZY0	626 aa	Known RBP	11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	FXYD6	Q9H0Q3	95 aa		11.19	□□□□□ -0.62
MBD1-215	ENST00000586884	DBX1	A6NMT0	343 aa		11.18	□□□□□ -0.62
MBD1-215	ENST00000586884	S100G	P29377	79 aa		11.18	□□□□□ -0.62
MBD1-215	ENST00000586884	RBMS2	Q15434	407 aa	Known RBP	11.18	□□□□□ -0.62
MBD1-215	ENST00000586884	TMEM69	Q5SWH9	247 aa		11.18	□□□□□ -0.62
MBD1-215	ENST00000586884	OR11H2	Q8NH07	326 aa		11.18	□□□□□ -0.62
MBD1-215	ENST00000586884	GINS3	Q9BRX5	216 aa		11.18	□□□□□ -0.62
MBD1-215	ENST00000586884	KRTAP17-1	Q9BYP8	105 aa		11.18	□□□□□ -0.62
MBD1-215	ENST00000586884	IGKV3-7	A0A075B6H7	116 aa		11.17	□□□□□ -0.62
MBD1-215	ENST00000586884	IGHV3-49	A0A0A0MS15	119 aa		11.17	□□□□□ -0.62
MBD1-215	ENST00000586884	GNG7	O60262	68 aa		11.17	□□□□□ -0.62
MBD1-215	ENST00000586884	MT-CO2	P00403	227 aa		11.17	□□□□□ -0.62
MBD1-215	ENST00000586884	TCTA	P57738	103 aa		11.17	□□□□□ -0.62
MBD1-215	ENST00000586884	TAS2R20	P59543	309 aa		11.17	□□□□□ -0.62
MBD1-215	ENST00000586884	NANOS2	P60321	138 aa	Known RBP	11.17	□□□□□ -0.62
MBD1-215	ENST00000586884	LPCAT3	Q6P1A2	487 aa		11.17	□□□□□ -0.62
MBD1-215	ENST00000586884	OR4A16	Q8NH70	328 aa		11.17	□□□□□ -0.62
MBD1-215	ENST00000586884	HECTD4	Q9Y4D8	3996 aa		11.16	□□□□□ -0.62
MBD1-215	ENST00000586884	DFFB	O76075	338 aa		11.16	□□□□□ -0.62
MBD1-215	ENST00000586884	CA1	P00915	261 aa	Predicted RBP	11.16	□□□□□ -0.62
MBD1-215	ENST00000586884	EIF4E	P06730	217 aa	Known RBP	11.16	□□□□□ -0.62
MBD1-215	ENST00000586884	PRSS3	P35030	304 aa		11.16	□□□□□ -0.62
MBD1-215	ENST00000586884	PRCD	Q00LT1	54 aa		11.16	□□□□□ -0.62
MBD1-215	ENST00000586884	NEDD8	Q15843	81 aa		11.16	□□□□□ -0.62
MBD1-215	ENST00000586884	PHLDA2	Q53GA4	152 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms