RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 S100GP29377 79 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 FXYD4P59646 89 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 AADACL3Q5VUY0 350 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 BTNL8Q6UX41 500 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 ZNF66Q6ZN08 573 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 SLC38A6Q8IZM9 456 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 OR52B4Q8NGK2 314 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 TMEM167AQ8TBQ9 72 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 SECTM1Q8WVN6 248 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 ZNF486Q96H40 463 aaPredicted RBP8.66□□□□□ -1.02
LIG3-207ENST00000586119 SCGB3A2Q96PL1 93 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 OR2A7Q96R45 310 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 HSD17B10Q99714 261 aaKnown RBP8.66□□□□□ -1.02
LIG3-207ENST00000586119 GGTLC1Q9BX51 225 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 HRASLSQ9HDD0 168 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 UBQLN2Q9UHD9 624 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 ZNF257Q9Y2Q1 563 aa8.66□□□□□ -1.02
LIG3-207ENST00000586119 TRAV3A0A0B4J244 114 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 CXorf65A6NEN9 183 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 NPIPB5A8MRT5 1133 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 GPR31O00270 319 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 TNFSF12O43508 249 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 CTRB1P17538 263 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 SCGB2B2Q4G0G5 96 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 ZNF585BQ52M93 769 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 CTRB2Q6GPI1 263 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 Q6ZNX1 250 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 SLC16A13Q7RTY0 426 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 SLC25A42Q86VD7 318 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 CMTM1Q8IZ96 169 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 OR4D10Q8NGI6 311 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 ZFAND1Q8TCF1 268 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 TCTEX1D2Q8WW35 142 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 FXYD6Q9H0Q3 95 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 CCL28Q9NRJ3 127 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 MCUBQ9NWR8 336 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 PRELID3BQ9Y3B1 194 aa8.65□□□□□ -1.02
LIG3-207ENST00000586119 UPK1BO75841 260 aa8.64□□□□□ -1.03
LIG3-207ENST00000586119 RPA2P15927 270 aa8.64□□□□□ -1.03
LIG3-207ENST00000586119 GNRHRP30968 328 aa8.64□□□□□ -1.03
LIG3-207ENST00000586119 RND3P61587 244 aa8.64□□□□□ -1.03
LIG3-207ENST00000586119 CATR1Q13166 79 aa8.64□□□□□ -1.03
LIG3-207ENST00000586119 FAM106AQ4KMX7 169 aa8.64□□□□□ -1.03
LIG3-207ENST00000586119 RPP25LQ8N5L8 163 aaKnown RBP8.64□□□□□ -1.03
LIG3-207ENST00000586119 OR51S1Q8NGJ8 323 aa8.64□□□□□ -1.03
LIG3-207ENST00000586119 EEF1AKMT3Q96AZ1 226 aa8.64□□□□□ -1.03
LIG3-207ENST00000586119 SLC25A21Q9BQT8 299 aaPredicted RBP8.64□□□□□ -1.03
LIG3-207ENST00000586119 IGLV11-55A0A075B6I3 123 aa8.63□□□□□ -1.03
LIG3-207ENST00000586119 CREBL2O60519 120 aaPredicted RBP8.63□□□□□ -1.03
LIG3-207ENST00000586119 CTSDP07339 412 aaPredicted RBP8.63□□□□□ -1.03
LIG3-207ENST00000586119 C8orf88P0DMB2 117 aa8.63□□□□□ -1.03
LIG3-207ENST00000586119 PGAM2P15259 253 aa8.63□□□□□ -1.03
LIG3-207ENST00000586119 KLK9Q2XQG4 91 aa8.63□□□□□ -1.03
LIG3-207ENST00000586119 FAM209BQ5JX69 171 aa8.63□□□□□ -1.03
LIG3-207ENST00000586119 FAAP20Q6NZ36 180 aa8.63□□□□□ -1.03
LIG3-207ENST00000586119 ZNF818PQ6ZRF7 136 aa8.63□□□□□ -1.03
LIG3-207ENST00000586119 LYG2Q86SG7 212 aa8.63□□□□□ -1.03
LIG3-207ENST00000586119 OR13C8Q8NGS7 320 aa8.63□□□□□ -1.03
LIG3-207ENST00000586119 OR4S2Q8NH73 311 aa8.63□□□□□ -1.03
LIG3-207ENST00000586119 CD300LFQ8TDQ1 290 aa8.63□□□□□ -1.03
LIG3-207ENST00000586119 FAM212BQ9NTI7 297 aaPredicted RBP8.63□□□□□ -1.03
LIG3-207ENST00000586119 KLK9Q9UKQ9 250 aa8.63□□□□□ -1.03
LIG3-207ENST00000586119 HERC2O95714 4834 aa8.63□□□□□ -1.03
LIG3-207ENST00000586119 VPS13DQ5THJ4 4388 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 IGHV3OR16-8A0A075B7F1 116 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 IGHV3-21A0A0B4J1V1 117 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 A8MWP6 167 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 RBFOX2O43251 390 aaKnown RBP eCLIP8.62□□□□□ -1.037e-8■■■■□ 24.6
LIG3-207ENST00000586119 PGLYRP1O75594 196 aaPredicted RBP8.62□□□□□ -1.03
LIG3-207ENST00000586119 DEDDO75618 318 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 B3GALNT1O75752 331 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 S1PR2O95136 353 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 HLA-GP17693 338 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 GPR183P32249 361 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 OR2B8PP59922 312 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 RBMS2Q15434 407 aaKnown RBP8.62□□□□□ -1.03
LIG3-207ENST00000586119 DEFB135Q30KP9 77 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 OR4A47Q6IF82 309 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 CEMP1Q6PRD7 247 aaPredicted RBP8.62□□□□□ -1.03
LIG3-207ENST00000586119 CCDC71LQ8N9Z2 235 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 OR10W1Q8NGF6 305 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 ZNF502Q8TBZ5 544 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 GPR132Q9UNW8 380 aa8.62□□□□□ -1.03
LIG3-207ENST00000586119 C14orf166Q9Y224 244 aaKnown RBP8.62□□□□□ -1.03
LIG3-207ENST00000586119 IGLC7A0M8Q6 106 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 PLA2G10O15496 165 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 LYRM1O43325 122 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 SPRY2O43597 315 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 ZNF207O43670 478 aaKnown RBP8.61□□□□□ -1.03
LIG3-207ENST00000586119 DEFA4P12838 97 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 RPL35AP18077 110 aaKnown RBP8.61□□□□□ -1.03
LIG3-207ENST00000586119 MAS1LP35410 378 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 RPL8P62917 257 aaKnown RBP8.61□□□□□ -1.03
LIG3-207ENST00000586119 TNFRSF9Q07011 255 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 ASAH1Q13510 395 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 ZNF124Q15973 351 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 MZT2BQ6NZ67 158 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 RBPMS2Q6ZRY4 209 aaKnown RBP8.61□□□□□ -1.03
LIG3-207ENST00000586119 WFDC3Q8IUB2 231 aa8.61□□□□□ -1.03
LIG3-207ENST00000586119 SPAG16Q8N0X2 631 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms