RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	IZUMO1R	A6ND01	250 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	C2orf70	A6NJV1	201 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760		A8MWP6	167 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	CYB5B	O43169	146 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	AKAIN1	P0CW23	69 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	UCP1	P25874	307 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	GPR183	P32249	361 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	SURF2	Q15527	256 aa	Predicted RBP	10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	IZUMO4	Q1ZYL8	232 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	LCN12	Q6JVE5	192 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760		Q8N1Y9	231 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760		Q8N402	240 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	VN1R17P	Q8TDU5	208 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	TMEM56	Q96MV1	263 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	RCHY1	Q96PM5	261 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	SLC2A8	Q9NY64	477 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	COPZ2	Q9P299	210 aa		10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	RSL24D1	Q9UHA3	163 aa	Known RBP	10.08	□□□□□ -0.8
SREBF1-223	ENST00000584760	TMEM213	A2RRL7	107 aa		10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760	FABP12	A6NFH5	140 aa		10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760	DISC1	C4P0D8	188 aa		10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760		K7EIM0	57 aa		10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760	CLEC3B	P05452	202 aa		10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760	FRMD6-AS1	P0C7T7	363 aa		10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760	AKR1C2	P52895	323 aa		10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760	PRCD	Q00LT1	54 aa		10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760	ZNF114	Q8NC26	417 aa		10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760	OR2K2	Q8NGT1	345 aa		10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760	OR4A16	Q8NH70	328 aa		10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760	PRRT1	Q99946	306 aa		10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760	RTBDN	Q9BSG5	229 aa	Predicted RBP	10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760	C5orf66	Q9H5L9	145 aa		10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760	ZC4H2	Q9NQZ6	224 aa		10.07	□□□□□ -0.8
SREBF1-223	ENST00000584760	CCDC160	A6NGH7	325 aa		10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760		F8W735	103 aa	Predicted RBP	10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	ZNF701	M0R085	212 aa	Predicted RBP	10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	B3GALNT1	O75752	331 aa		10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	FOLR2	P14207	255 aa		10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	SP6	Q3SY56	376 aa		10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	CD300E	Q496F6	205 aa	Predicted RBP	10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	ZFAND6	Q6FIF0	208 aa		10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	SLC25A24	Q6NUK1	477 aa		10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	UNQ9165/PRO28630	Q6UXU0	137 aa		10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	SBSPON	Q8IVN8	264 aa		10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	OR2C3	Q8N628	320 aa		10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	OR51S1	Q8NGJ8	323 aa		10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	OR1P1	Q8NH06	330 aa		10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	CACNG8	Q8WXS5	425 aa		10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	TRIM63	Q969Q1	353 aa		10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760	C14orf166	Q9Y224	244 aa	Known RBP	10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760		V9GYH0	126 aa		10.06	□□□□□ -0.8
SREBF1-223	ENST00000584760		A0A0B4J293	547 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760		A0A0G2JRQ6	117 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760		A8MZ25	164 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	TGOLN2	O43493	480 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	OR5AC1	P0C628	307 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	IGHV4-30-4	P0DP06	118 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	HSPE1	P61604	102 aa	Known RBP	10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	ZNF79	Q15937	498 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	TRIM16L	Q309B1	348 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	DEFB114	Q30KQ6	69 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	OR1L6	Q8NGR2	347 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	LHFPL5	Q8TAF8	219 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	DYNLRB2	Q8TF09	96 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	SCARB1	Q8WTV0	552 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	ATP6V0B	Q99437	205 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	ZNF436	Q9C0F3	470 aa	Predicted RBP	10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	TMEM222	Q9H0R3	208 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	NAA60	Q9H7X0	242 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	PLEKHA3	Q9HB20	300 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	C21orf62	Q9NYP8	219 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	GPR132	Q9UNW8	380 aa		10.05	□□□□□ -0.8
SREBF1-223	ENST00000584760	IGHV3-21	A0A0B4J1V1	117 aa		10.04	□□□□□ -0.8
SREBF1-223	ENST00000584760	OR2T8	A6NH00	312 aa		10.04	□□□□□ -0.8
SREBF1-223	ENST00000584760	CRYM-AS1	A6NIL9	109 aa		10.04	□□□□□ -0.8
SREBF1-223	ENST00000584760	ST8SIA3	O43173	380 aa		10.04	□□□□□ -0.8
SREBF1-223	ENST00000584760	ATG12	O94817	140 aa		10.04	□□□□□ -0.8
SREBF1-223	ENST00000584760	CDS2	O95674	445 aa		10.04	□□□□□ -0.8
SREBF1-223	ENST00000584760	CBLN1	P23435	193 aa		10.04	□□□□□ -0.8
SREBF1-223	ENST00000584760	FAM106A	Q4KMX7	169 aa		10.04	□□□□□ -0.8
SREBF1-223	ENST00000584760	PLET1	Q6UQ28	207 aa		10.04	□□□□□ -0.8
SREBF1-223	ENST00000584760	GLYATL2	Q8WU03	294 aa		10.04	□□□□□ -0.8
SREBF1-223	ENST00000584760	TMEM190	Q8WZ59	177 aa		10.04	□□□□□ -0.8
SREBF1-223	ENST00000584760	BSCL2	Q96G97	398 aa	Predicted RBP	10.04	□□□□□ -0.8
SREBF1-223	ENST00000584760	C19orf73	Q9NVV2	129 aa		10.04	□□□□□ -0.8
SREBF1-223	ENST00000584760	TECR	Q9NZ01	308 aa	Known RBP	10.04	□□□□□ -0.8
SREBF1-223	ENST00000584760	IGHV3-35	A0A0C4DH35	117 aa		10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	ZNF320	A2RRD8	509 aa		10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	INS-IGF2	F8WCM5	200 aa		10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760		I3L2K1	104 aa		10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	ADM	P35318	185 aa		10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	KLF9	Q13886	244 aa	Predicted RBP	10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	AARD	Q4LEZ3	155 aa		10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	SPINK9	Q5DT21	86 aa		10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	SPSB3	Q6PJ21	355 aa		10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	GTSCR1	Q86UQ5	136 aa		10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	SGPP2	Q8IWX5	399 aa		10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	RBPMS	Q93062	196 aa	Known RBP	10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	TMEM230	Q96A57	120 aa		10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms