RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-219	ENST00000584476	UBA52	P62987	128 aa	Known RBP	4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	KRTAP1-1	Q07627	177 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	EXOSC2	Q13868	293 aa	Known RBP	4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	CLINT1	Q14677	625 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	PLGLA	Q15195	96 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	C5orf64	Q2M2E5	130 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	OR8G2P	Q6IF36	304 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	ALKAL2	Q6UX46	152 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	PPP1R27	Q86WC6	154 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	STX12	Q86Y82	276 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	MMD2	Q8IY49	270 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	ZNF680	Q8NEM1	530 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	OR1S2	Q8NGQ3	325 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	OR5B3	Q8NH48	314 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	PIFO	Q8TCI5	191 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	PCNP	Q8WW12	178 aa	Known RBP	4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	C22orf15	Q8WYQ4	148 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	CIB3	Q96Q77	187 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	MEGF9	Q9H1U4	602 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	HIPK2	Q9H2X6	1198 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	PLEKHA3	Q9HB20	300 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	ENY2	Q9NPA8	101 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	FKBP11	Q9NYL4	201 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	FAM96B	Q9Y3D0	163 aa		4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	STRAP	Q9Y3F4	350 aa	Known RBP	4.64	□□□□□ -1.67
MSI2-219	ENST00000584476	CR1	P17927	2039 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	PTPN13	Q12923	2485 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	IGLC7	A0M8Q6	106 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	SH2D7	A6NKC9	451 aa	Predicted RBP	4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	PRSS46	E5RG02	174 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	REG1A	P05451	166 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	FAM106CP	P0CH98	169 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	APELA	P0DMC3	54 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	RNASE2	P10153	161 aa	Known RBP	4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	TPT1	P13693	172 aa	Known RBP	4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	AREG	P15514	252 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	NPY1R	P25929	384 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	MAS1L	P35410	378 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	RPL27A	P46776	148 aa	Known RBP	4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	COMP	P49747	757 aa	Predicted RBP	4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	WT1-AS	Q06250	92 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	BAX	Q07812	192 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	SLC38A11	Q08AI6	406 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	LY6E	Q16553	131 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	LRRC75B	Q2VPJ9	315 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	DEFB112	Q30KQ8	113 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	FAM74A1	Q5RGS3	127 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	C19orf35	Q6ZS72	473 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	ZNF767P	Q75MW2	155 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	TMEM219	Q86XT9	240 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	BAP18	Q8IXM2	172 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	STPG2	Q8N412	459 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476		Q8N9W7	124 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	SLC24A4	Q8NFF2	622 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	STOML3	Q8TAV4	291 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	SRSF12	Q8WXF0	261 aa	Known RBP	4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	ATP5S	Q99766	215 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	SSX3	Q99909	188 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	ARV1	Q9H2C2	271 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	KIAA1456	Q9P272	454 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	CACFD1	Q9UGQ2	172 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	RFNG	Q9Y644	331 aa		4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	PRRC2A	P48634	2157 aa	Known RBP	4.63	□□□□□ -1.67
MSI2-219	ENST00000584476	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476		A0A1W2PN81	502 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476		A6NDX4	124 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	TEX22	C9J3V5	150 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	INS-IGF2	F8WCM5	200 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476		H3BUX3	64 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	JTB	O76095	146 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	CNIH1	O95406	144 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	LY86	O95711	162 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	IFNA7	P01567	189 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	IGHV4-59	P01825	116 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	AMY1A	P04745	511 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	FBP1	P09467	338 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	OR8U8	P0C7N1	319 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	OR13C7	P0DN81	318 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	CHRNA7	P36544	502 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	MFAP2	P55001	183 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	RPP30	P78346	268 aa	Known RBP	4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	CX3CL1	P78423	397 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	NDP	Q00604	133 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	RUNX1	Q01196	453 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	FXYD3	Q14802	87 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	BSX	Q3C1V8	233 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	C2orf83	Q53S99	150 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	IL17REL	Q6ZVW7	336 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	UBAC2	Q8NBM4	344 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	HSD17B11	Q8NBQ5	300 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	NANP	Q8TBE9	248 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	SCARB1	Q8WTV0	552 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	TMED6	Q8WW62	240 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	SSMEM1	Q8WWF3	244 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	ZNF48	Q96MX3	618 aa	Predicted RBP	4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	RBM14	Q96PK6	669 aa	Known RBP	4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	HSPB9	Q9BQS6	159 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	SLC25A33	Q9BSK2	321 aa		4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	FAM103A1	Q9BTL3	118 aa	Known RBP	4.62	□□□□□ -1.67
MSI2-219	ENST00000584476	SH3BGRL3	Q9H299	93 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms