RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 TEX29Q8N6K0 151 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 NHP2Q9NX24 153 aaKnown RBP10.98□□□□□ -0.65
RNF43-208ENST00000584437 STRCP1A6NGW2 1772 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 MYO16Q9Y6X6 1858 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 TRAV8-2A0A0B4J237 113 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 IGHV1-69-2A0A0G2JMI3 117 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 PPBPP02775 128 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 UCNP55089 124 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 FADS6Q8N9I5 356 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 OR13A1Q8NGR1 328 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 FNDC4Q9H6D8 234 aaPredicted RBP10.98□□□□□ -0.65
RNF43-208ENST00000584437 DOCK5Q9H7D0 1870 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 TRAV1-1A0A0B4J248 108 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 TEX38Q6PEX7 206 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 SLC25A2Q9BXI2 301 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 RNF115Q9Y4L5 304 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 NUTF2P61970 127 aaKnown RBP10.98□□□□□ -0.65
RNF43-208ENST00000584437 HSD52Q0P140 79 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 ATP5L2Q7Z4Y8 100 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 TMEM190Q8WZ59 177 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 NXT2Q9NPJ8 142 aaKnown RBP10.98□□□□□ -0.65
RNF43-208ENST00000584437 NDUFS8O00217 210 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 LEPP41159 167 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 C1orf194Q5T5A4 169 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 CDCP2Q5VXM1 449 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 MRPL52Q86TS9 123 aaKnown RBP10.97□□□□□ -0.65
RNF43-208ENST00000584437 ELOVL5Q9NYP7 299 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 CHCHD2Q9Y6H1 151 aaPredicted RBP10.97□□□□□ -0.65
RNF43-208ENST00000584437 ATG2BQ96BY7 2078 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 DPM2O94777 84 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 DNASE2BQ8WZ79 361 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 TMEM101Q96IK0 257 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 TMEM74BQ9NUR3 256 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 SAP25Q8TEE9 199 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 SSBP4Q9BWG4 385 aaPredicted RBP10.97□□□□□ -0.65
RNF43-208ENST00000584437 NAPSAO96009 420 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 LINC01559Q495D7 138 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 C21orf62Q9NYP8 219 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 PILRBQ9UKJ0 227 aa10.97□□□□□ -0.65
RNF43-208ENST00000584437 IGHV3OR16-12A0A075B7B8 117 aa10.96□□□□□ -0.65
RNF43-208ENST00000584437 SPAARA0A1B0GVQ0 90 aa10.96□□□□□ -0.65
RNF43-208ENST00000584437 FAM90A9PA6NNJ1 464 aa10.96□□□□□ -0.65
RNF43-208ENST00000584437 C1orf162Q8NEQ5 155 aaPredicted RBP10.96□□□□□ -0.65
RNF43-208ENST00000584437 OCC1Q8TAD7 63 aa10.96□□□□□ -0.65
RNF43-208ENST00000584437 ASCL2Q99929 193 aa10.96□□□□□ -0.65
RNF43-208ENST00000584437 DLEU1O43261 78 aa10.96□□□□□ -0.65
RNF43-208ENST00000584437 NDUFA3O95167 84 aa10.96□□□□□ -0.65
RNF43-208ENST00000584437 FOXL1Q12952 345 aa10.96□□□□□ -0.65
RNF43-208ENST00000584437 PLPPR1Q8TBJ4 325 aa10.96□□□□□ -0.65
RNF43-208ENST00000584437 REG4Q9BYZ8 158 aa10.96□□□□□ -0.65
RNF43-208ENST00000584437 WFDC1Q9HC57 220 aa10.96□□□□□ -0.65
RNF43-208ENST00000584437 EPDR1Q9UM22 224 aa10.96□□□□□ -0.65
RNF43-208ENST00000584437 B9A039 149 aa10.96□□□□□ -0.66
RNF43-208ENST00000584437 PAX1P15863 534 aa10.96□□□□□ -0.66
RNF43-208ENST00000584437 DUX5Q96PT3 197 aa10.96□□□□□ -0.66
RNF43-208ENST00000584437 FOXA2Q9Y261 457 aaPredicted RBP10.96□□□□□ -0.66
RNF43-208ENST00000584437 WDR83OSQ9Y284 106 aa10.96□□□□□ -0.66
RNF43-208ENST00000584437 RTN4RL2Q86UN3 420 aa10.96□□□□□ -0.66
RNF43-208ENST00000584437 TIMP4Q99727 224 aa10.96□□□□□ -0.66
RNF43-208ENST00000584437 ANAPC13Q9BS18 74 aa10.96□□□□□ -0.66
RNF43-208ENST00000584437 ZNF831Q5JPB2 1677 aa10.96□□□□□ -0.66
RNF43-208ENST00000584437 IGKV1D-13A0A0B4J2D9 117 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 FABP5P3A8MUU1 101 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 UPK2O00526 184 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 IGKV1-13P0DP09 117 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 OR9G4Q8NGQ1 327 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 DPM3Q9P2X0 92 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 UNC13CQ8NB66 2214 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 C15orf61A6NNL5 157 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 CXCL1P09341 107 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 ZNF585BQ52M93 769 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 Q5PR19 223 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 FAM181BA6NEQ2 426 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 C9JCJ5 164 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 YPEL1O60688 119 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 YPEL2Q96QA6 119 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 TSKUQ8WUA8 353 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 LOXL4Q96JB6 756 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 CYTL1Q9NRR1 136 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 ADAMTSL1Q8N6G6 1762 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 HOXA3O43365 443 aaPredicted RBP10.95□□□□□ -0.66
RNF43-208ENST00000584437 NUP37Q8NFH4 326 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 CFHR5Q9BXR6 569 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 FBXL15Q9H469 300 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 SEMA5BQ9P283 1151 aa10.95□□□□□ -0.66
RNF43-208ENST00000584437 COL24A1Q17RW2 1714 aa10.94□□□□□ -0.66
RNF43-208ENST00000584437 PAQR4Q8N4S7 273 aaPredicted RBP10.94□□□□□ -0.66
RNF43-208ENST00000584437 FBXL7Q9UJT9 491 aa10.94□□□□□ -0.66
RNF43-208ENST00000584437 CEACAM1P13688 526 aa10.94□□□□□ -0.66
RNF43-208ENST00000584437 COQ2Q96H96 371 aa10.94□□□□□ -0.66
RNF43-208ENST00000584437 SMPXQ9UHP9 88 aa10.94□□□□□ -0.66
RNF43-208ENST00000584437 NEUROG3Q9Y4Z2 214 aa10.94□□□□□ -0.66
RNF43-208ENST00000584437 LINC00312Q9Y6C7 94 aa10.94□□□□□ -0.66
RNF43-208ENST00000584437 PSMB11A5LHX3 300 aa10.94□□□□□ -0.66
RNF43-208ENST00000584437 LINC01549A6NIU2 74 aa10.94□□□□□ -0.66
RNF43-208ENST00000584437 IQCF6A8MYZ5 107 aa10.94□□□□□ -0.66
RNF43-208ENST00000584437 LYPD3O95274 346 aa10.94□□□□□ -0.66
RNF43-208ENST00000584437 SRSF1Q07955 248 aaKnown RBP eCLIP10.94□□□□□ -0.662e-7■■□□□ 11.6
RNF43-208ENST00000584437 SRSF7Q16629 238 aaKnown RBP eCLIP10.94□□□□□ -0.667e-7■■■■□ 22.3
RNF43-208ENST00000584437 GFI1Q99684 422 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms