RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 Q6ZTC4 211 aa9.72□□□□□ -0.85
COPS3-218ENST00000584216 GBGT1Q8N5D6 347 aa9.72□□□□□ -0.85
COPS3-218ENST00000584216 POM121L12Q8N7R1 296 aa9.72□□□□□ -0.85
COPS3-218ENST00000584216 DGCR14Q96DF8 476 aaKnown RBP9.72□□□□□ -0.85
COPS3-218ENST00000584216 TMEM56Q96MV1 263 aa9.72□□□□□ -0.85
COPS3-218ENST00000584216 TXN2Q99757 166 aa9.72□□□□□ -0.85
COPS3-218ENST00000584216 HINT2Q9BX68 163 aa9.72□□□□□ -0.85
COPS3-218ENST00000584216 NDUFA4L2Q9NRX3 87 aa9.72□□□□□ -0.85
COPS3-218ENST00000584216 TRAV2A0A0B4J234 112 aa9.71□□□□□ -0.86
COPS3-218ENST00000584216 IGHV4-28A0A0C4DH34 117 aa9.71□□□□□ -0.86
COPS3-218ENST00000584216 TEX50A0A1B0GTY4 177 aa9.71□□□□□ -0.86
COPS3-218ENST00000584216 F8W735 103 aaPredicted RBP9.71□□□□□ -0.86
COPS3-218ENST00000584216 K7EIM0 57 aa9.71□□□□□ -0.86
COPS3-218ENST00000584216 SNAPC5O75971 98 aa9.71□□□□□ -0.86
COPS3-218ENST00000584216 PPYP01298 95 aa9.71□□□□□ -0.86
COPS3-218ENST00000584216 AMBPP02760 352 aa9.71□□□□□ -0.86
COPS3-218ENST00000584216 SPP1P10451 314 aa9.71□□□□□ -0.86
COPS3-218ENST00000584216 OGFRL1Q5TC84 451 aaPredicted RBP9.71□□□□□ -0.86
COPS3-218ENST00000584216 AADACL3Q5VUY0 350 aa9.71□□□□□ -0.86
COPS3-218ENST00000584216 FAM90A2PQ658T7 463 aa9.71□□□□□ -0.86
COPS3-218ENST00000584216 MORN3Q6PF18 240 aaPredicted RBP9.71□□□□□ -0.86
COPS3-218ENST00000584216 TCF24Q7RTU0 167 aa9.71□□□□□ -0.86
COPS3-218ENST00000584216 SLC5A7Q9GZV3 580 aa9.71□□□□□ -0.86
COPS3-218ENST00000584216 FKBP11Q9NYL4 201 aa9.71□□□□□ -0.86
COPS3-218ENST00000584216 DNAH6Q9C0G6 4158 aa9.71□□□□□ -0.86
COPS3-218ENST00000584216 IGHV3-49A0A0A0MS15 119 aa9.7□□□□□ -0.86
COPS3-218ENST00000584216 MARCH11A6NNE9 402 aa9.7□□□□□ -0.86
COPS3-218ENST00000584216 MFAP4P55083 255 aa9.7□□□□□ -0.86
COPS3-218ENST00000584216 DEFB131AP59861 70 aa9.7□□□□□ -0.86
COPS3-218ENST00000584216 DUSP18Q8NEJ0 188 aa9.7□□□□□ -0.86
COPS3-218ENST00000584216 BEST4Q8NFU0 473 aa9.7□□□□□ -0.86
COPS3-218ENST00000584216 OR1P1Q8NH06 330 aa9.7□□□□□ -0.86
COPS3-218ENST00000584216 OR51H1Q8NH63 302 aa9.7□□□□□ -0.86
COPS3-218ENST00000584216 NDUFAF3Q9BU61 184 aa9.7□□□□□ -0.86
COPS3-218ENST00000584216 DUSP21Q9H596 190 aa9.7□□□□□ -0.86
COPS3-218ENST00000584216 TMEM231Q9H6L2 316 aa9.7□□□□□ -0.86
COPS3-218ENST00000584216 OR51B2Q9Y5P1 312 aa9.7□□□□□ -0.86
COPS3-218ENST00000584216 RTL8CO15255 209 aa9.69□□□□□ -0.86
COPS3-218ENST00000584216 ST8SIA3O43173 380 aa9.69□□□□□ -0.86
COPS3-218ENST00000584216 RBMY1A1P0DJD3 496 aaKnown RBP9.69□□□□□ -0.86
COPS3-218ENST00000584216 RBMY1CP0DJD4 496 aa9.69□□□□□ -0.86
COPS3-218ENST00000584216 RPL11P62913 178 aaKnown RBP9.69□□□□□ -0.86
COPS3-218ENST00000584216 RBMY1FQ15415 496 aaKnown RBP9.69□□□□□ -0.86
COPS3-218ENST00000584216 LGALS9BQ3B8N2 356 aa9.69□□□□□ -0.86
COPS3-218ENST00000584216 SOHLH1Q5JUK2 328 aa9.69□□□□□ -0.86
COPS3-218ENST00000584216 LEMD1Q68G75 181 aa9.69□□□□□ -0.86
COPS3-218ENST00000584216 PRSS48Q7RTY5 328 aa9.69□□□□□ -0.86
COPS3-218ENST00000584216 CADM3Q8N126 398 aa9.69□□□□□ -0.86
COPS3-218ENST00000584216 GIMAP1Q8WWP7 306 aa9.69□□□□□ -0.86
COPS3-218ENST00000584216 NXF2Q9GZY0 626 aaKnown RBP9.69□□□□□ -0.86
COPS3-218ENST00000584216 MS4A6AQ9H2W1 248 aa9.69□□□□□ -0.86
COPS3-218ENST00000584216 PRNDQ9UKY0 176 aa9.69□□□□□ -0.86
COPS3-218ENST00000584216 PKHD1P08F94 4074 aa9.69□□□□□ -0.86
COPS3-218ENST00000584216 DEFB131BA0A096LNP1 70 aa9.68□□□□□ -0.86
COPS3-218ENST00000584216 ZNF705EA8MWA4 302 aaPredicted RBP9.68□□□□□ -0.86
COPS3-218ENST00000584216 SSX5O60225 188 aa9.68□□□□□ -0.86
COPS3-218ENST00000584216 GNG7O60262 68 aa9.68□□□□□ -0.86
COPS3-218ENST00000584216 FXYD4P59646 89 aa9.68□□□□□ -0.86
COPS3-218ENST00000584216 ZNF367Q7RTV3 350 aa9.68□□□□□ -0.86
COPS3-218ENST00000584216 TPRA1Q86W33 373 aa9.68□□□□□ -0.86
COPS3-218ENST00000584216 TSPAN14Q8NG11 270 aa9.68□□□□□ -0.86
COPS3-218ENST00000584216 SLC25A46Q96AG3 418 aa9.68□□□□□ -0.86
COPS3-218ENST00000584216 TSC22D3Q99576 134 aa9.68□□□□□ -0.86
COPS3-218ENST00000584216 IGHV3OR16-13A0A075B7E8 117 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 IGHV3-74A0A0B4J1X5 117 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 TRDV1A0A1B0GX56 115 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 NOTOA8MTQ0 251 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 NPY1RP25929 384 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 HERV-K104P61576 105 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 TBCEQ15813 527 aaPredicted RBP9.67□□□□□ -0.86
COPS3-218ENST00000584216 ZNF818PQ6ZRF7 136 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 TMEM17Q86X19 198 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 HOGA1Q86XE5 327 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 MISP3Q96FF7 219 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 ZNF414Q96IQ9 312 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 VSIRQ9H7M9 311 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 TMEM14BQ9NUH8 114 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 NDUFB11Q9NX14 153 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 PLA2G2EQ9NZK7 142 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 RABAC1Q9UI14 185 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 TBC1D24Q9ULP9 559 aa9.67□□□□□ -0.86
COPS3-218ENST00000584216 FAT2Q9NYQ8 4349 aa9.66□□□□□ -0.86
COPS3-218ENST00000584216 A0A1W2PS18 150 aa9.66□□□□□ -0.86
COPS3-218ENST00000584216 M0R2N4 97 aa9.66□□□□□ -0.86
COPS3-218ENST00000584216 EBAG9O00559 213 aa9.66□□□□□ -0.86
COPS3-218ENST00000584216 KRASP01116 189 aa9.66□□□□□ -0.86
COPS3-218ENST00000584216 IFNA10P01566 189 aa9.66□□□□□ -0.86
COPS3-218ENST00000584216 F2RP25116 425 aa9.66□□□□□ -0.86
COPS3-218ENST00000584216 C22orf42Q6IC83 251 aa9.66□□□□□ -0.86
COPS3-218ENST00000584216 TRPT1Q86TN4 253 aaKnown RBP9.66□□□□□ -0.86
COPS3-218ENST00000584216 ST8SIA2Q92186 375 aa9.66□□□□□ -0.86
COPS3-218ENST00000584216 GRAMD2BQ96HH9 432 aa9.66□□□□□ -0.86
COPS3-218ENST00000584216 ABCA13Q86UQ4 5058 aa9.65□□□□□ -0.86
COPS3-218ENST00000584216 ELOA3CA0A087WX78 387 aaPredicted RBP9.65□□□□□ -0.86
COPS3-218ENST00000584216 I3L2K1 104 aa9.65□□□□□ -0.86
COPS3-218ENST00000584216 MT-CO2P00403 227 aa9.65□□□□□ -0.86
COPS3-218ENST00000584216 IFNA21P01568 189 aa9.65□□□□□ -0.86
COPS3-218ENST00000584216 IFNA17P01571 189 aa9.65□□□□□ -0.86
COPS3-218ENST00000584216 CBX5P45973 191 aa9.65□□□□□ -0.86
COPS3-218ENST00000584216 NPBWR1P48145 328 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms