RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 DYNC2LI1Q8TCX1 351 aa16.16■□□□□ 0.18
PPP4R1-228ENST00000584074 TP53RKQ96S44 253 aa16.16■□□□□ 0.18
PPP4R1-228ENST00000584074 SLC2A8Q9NY64 477 aa16.16■□□□□ 0.18
PPP4R1-228ENST00000584074 DNAH7Q8WXX0 4024 aa16.16■□□□□ 0.18
PPP4R1-228ENST00000584074 RAB3DO95716 219 aa16.15■□□□□ 0.18
PPP4R1-228ENST00000584074 TMBIM6P55061 237 aa16.15■□□□□ 0.18
PPP4R1-228ENST00000584074 TAS2R19P59542 299 aa16.15■□□□□ 0.18
PPP4R1-228ENST00000584074 SCGB2B2Q4G0G5 96 aa16.15■□□□□ 0.18
PPP4R1-228ENST00000584074 STEAP1BQ6NZ63 245 aa16.15■□□□□ 0.18
PPP4R1-228ENST00000584074 TERB2Q8NHR7 220 aa16.15■□□□□ 0.18
PPP4R1-228ENST00000584074 SCARB1Q8WTV0 552 aa16.15■□□□□ 0.18
PPP4R1-228ENST00000584074 K7EIM0 57 aa16.14■□□□□ 0.17
PPP4R1-228ENST00000584074 ZNF57Q68EA5 555 aaPredicted RBP16.14■□□□□ 0.17
PPP4R1-228ENST00000584074 FAAP20Q6NZ36 180 aa16.14■□□□□ 0.17
PPP4R1-228ENST00000584074 TMEM61Q8N0U2 210 aa16.14■□□□□ 0.17
PPP4R1-228ENST00000584074 OR13C8Q8NGS7 320 aa16.14■□□□□ 0.17
PPP4R1-228ENST00000584074 ZNF436Q9C0F3 470 aaPredicted RBP16.14■□□□□ 0.17
PPP4R1-228ENST00000584074 WFDC10AQ9H1F0 79 aa16.14■□□□□ 0.17
PPP4R1-228ENST00000584074 C21orf62Q9NYP8 219 aa16.14■□□□□ 0.17
PPP4R1-228ENST00000584074 CCDC59Q9P031 241 aaKnown RBP16.14■□□□□ 0.17
PPP4R1-228ENST00000584074 C3orf85A0A1B0GTC6 90 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 F8W735 103 aaPredicted RBP16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 IGKV1-5P01602 117 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 HSPE1P61604 102 aaKnown RBP16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 MRPS10P82664 201 aaKnown RBP16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 SP6Q3SY56 376 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 BTNL8Q6UX41 500 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 OR2C3Q8N628 320 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 DEFB125Q8N687 156 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 UBAC2Q8NBM4 344 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 OR1L6Q8NGR2 347 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 OR1P1Q8NH06 330 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 ZFAND1Q8TCF1 268 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 MARCH1Q8TCQ1 289 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 SMIM4Q8WVI0 70 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 BSCL2Q96G97 398 aaPredicted RBP16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 DIRAS2Q96HU8 199 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 CHRDL1Q9BU40 450 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 PALMDQ9NP74 551 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 UFC1Q9Y3C8 167 aa16.13■□□□□ 0.17
PPP4R1-228ENST00000584074 C8orf88P0DMB2 117 aa16.12■□□□□ 0.17
PPP4R1-228ENST00000584074 PRCDQ00LT1 54 aa16.12■□□□□ 0.17
PPP4R1-228ENST00000584074 SSBP1Q04837 148 aaKnown RBP16.12■□□□□ 0.17
PPP4R1-228ENST00000584074 BCL7BQ9BQE9 202 aa16.12■□□□□ 0.17
PPP4R1-228ENST00000584074 COPZ2Q9P299 210 aa16.12■□□□□ 0.17
PPP4R1-228ENST00000584074 A0A0B4J293 547 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 OR11H12B2RN74 326 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 C3orf84H3BNL1 204 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 SCAF4O95104 1147 aaKnown RBP16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 P0C879 139 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 ADMP35318 185 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 RPL5P46777 297 aaKnown RBP16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 ELLP55199 621 aaPredicted RBP16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 IL18Q14116 193 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 Q56UQ5 140 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 SPINK9Q5DT21 86 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 SPSB3Q6PJ21 355 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 LINC00322Q6ZN03 302 aaPredicted RBP16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 MUC7Q8TAX7 377 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 TMEM190Q8WZ59 177 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 MARC2Q969Z3 335 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 MISP3Q96FF7 219 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 SPATA25Q9BR10 227 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 MRPL27Q9P0M9 148 aaKnown RBP16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 RYR3Q15413 4870 aa16.11■□□□□ 0.17
PPP4R1-228ENST00000584074 H3BMQ9 156 aa16.1■□□□□ 0.17
PPP4R1-228ENST00000584074 CTSDP07339 412 aaPredicted RBP16.1■□□□□ 0.17
PPP4R1-228ENST00000584074 AKR1C2P52895 323 aa16.1■□□□□ 0.17
PPP4R1-228ENST00000584074 MEF2DQ14814 521 aa16.1■□□□□ 0.17
PPP4R1-228ENST00000584074 CCDC71LQ8N9Z2 235 aa16.1■□□□□ 0.17
PPP4R1-228ENST00000584074 ATP6V0BQ99437 205 aa16.1■□□□□ 0.17
PPP4R1-228ENST00000584074 C6orf62Q9GZU0 229 aaPredicted RBP16.1■□□□□ 0.17
PPP4R1-228ENST00000584074 CEPT1Q9Y6K0 416 aa16.1■□□□□ 0.17
PPP4R1-228ENST00000584074 IGHV3OR16-8A0A075B7F1 116 aa16.09■□□□□ 0.17
PPP4R1-228ENST00000584074 RBMY1BA6NDE4 496 aaKnown RBP16.09■□□□□ 0.17
PPP4R1-228ENST00000584074 RBMY1EA6NEQ0 496 aaKnown RBP16.09■□□□□ 0.17
PPP4R1-228ENST00000584074 I3L2K1 104 aa16.09■□□□□ 0.17
PPP4R1-228ENST00000584074 RBMY1DP0C7P1 496 aaKnown RBP16.09■□□□□ 0.17
PPP4R1-228ENST00000584074 TRIM16LQ309B1 348 aa16.09■□□□□ 0.17
PPP4R1-228ENST00000584074 SLC16A13Q7RTY0 426 aa16.09■□□□□ 0.17
PPP4R1-228ENST00000584074 ZNF114Q8NC26 417 aa16.09■□□□□ 0.17
PPP4R1-228ENST00000584074 CITED4Q96RK1 184 aa16.09■□□□□ 0.17
PPP4R1-228ENST00000584074 SLIRPQ9GZT3 109 aaKnown RBP16.09■□□□□ 0.17
PPP4R1-228ENST00000584074 SRD5A3Q9H8P0 318 aa16.09■□□□□ 0.17
PPP4R1-228ENST00000584074 NDUFA4O00483 81 aa16.08■□□□□ 0.16
PPP4R1-228ENST00000584074 CTDSPLO15194 276 aa16.08■□□□□ 0.16
PPP4R1-228ENST00000584074 NOL3O60936 208 aaKnown RBP16.08■□□□□ 0.16
PPP4R1-228ENST00000584074 IGHV3-48P01763 117 aa16.08■□□□□ 0.16
PPP4R1-228ENST00000584074 CTSGP08311 255 aa16.08■□□□□ 0.16
PPP4R1-228ENST00000584074 UCP1P25874 307 aa16.08■□□□□ 0.16
PPP4R1-228ENST00000584074 ERHP84090 104 aaKnown RBP16.08■□□□□ 0.16
PPP4R1-228ENST00000584074 OR52B4Q8NGK2 314 aa16.08■□□□□ 0.16
PPP4R1-228ENST00000584074 OR4C16Q8NGL9 310 aa16.08■□□□□ 0.16
PPP4R1-228ENST00000584074 ISOC1Q96CN7 298 aa16.08■□□□□ 0.16
PPP4R1-228ENST00000584074 RTBDNQ9BSG5 229 aaPredicted RBP16.08■□□□□ 0.16
PPP4R1-228ENST00000584074 C20orf24Q9BUV8 137 aa16.08■□□□□ 0.16
PPP4R1-228ENST00000584074 DAZ1Q9NQZ3 744 aaKnown RBP16.08■□□□□ 0.16
PPP4R1-228ENST00000584074 DISC1C4P0D8 188 aa16.07■□□□□ 0.16
PPP4R1-228ENST00000584074 ST8SIA3O43173 380 aa16.07■□□□□ 0.16
PPP4R1-228ENST00000584074 ZNF207O43670 478 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 678.4 ms