RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 ZNF546Q86UE3 836 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 TTC9CQ8N5M4 171 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 FAM110DQ8TAY7 271 aaPredicted RBP9.16□□□□□ -0.94
CDRT1-207ENST00000583965 NOL4LQ96MY1 436 aaPredicted RBP9.16□□□□□ -0.94
CDRT1-207ENST00000583965 CIB3Q96Q77 187 aaPredicted RBP9.16□□□□□ -0.94
CDRT1-207ENST00000583965 WNT10AQ9GZT5 417 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 MBD2Q9UBB5 411 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 RNF114Q9Y508 228 aa9.16□□□□□ -0.94
CDRT1-207ENST00000583965 A0A0D9SG52 128 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 TMEM89A2RUT3 159 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 PSMB11A5LHX3 300 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 G3V318 75 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 H3BUA1 57 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 K7EPK0 472 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 WRBO00258 174 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 RGS13O14921 159 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 ARPC5O15511 151 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 SYNGR2O43760 224 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 DEDDO75618 318 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 NXPH3O95157 252 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 MBPP02686 304 aaPredicted RBP9.15□□□□□ -0.94
CDRT1-207ENST00000583965 CRYGCP07315 174 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 CTRB1P17538 263 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 PPIFP30405 207 aaKnown RBP9.15□□□□□ -0.94
CDRT1-207ENST00000583965 CFHR3Q02985 330 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 WT1-ASQ06250 92 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 ASPHD1Q5U4P2 390 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 CTRB2Q6GPI1 263 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 ACOT7LQ6ZUV0 252 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 CENPVQ7Z7K6 275 aaPredicted RBP9.15□□□□□ -0.94
CDRT1-207ENST00000583965 KCNRGQ8N5I3 272 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 OR2C3Q8N628 320 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 COMMD1Q8N668 190 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 OR10W1Q8NGF6 305 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 OR1L6Q8NGR2 347 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 DTD1Q8TEA8 209 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 TMEM158Q8WZ71 300 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 HIPK2Q9H2X6 1198 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 RBKSQ9H477 322 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 C11orf1Q9H5F2 150 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 SLA2Q9H6Q3 261 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 LINC00527Q9UJ94 153 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 BOLA1Q9Y3E2 137 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 WSB1Q9Y6I7 421 aa9.15□□□□□ -0.94
CDRT1-207ENST00000583965 RNF222A6NCQ9 220 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 L7N2F9 121 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 CYB5BO43169 146 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 BRI3O95415 125 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 SCGB1D2O95969 90 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 IGHG4P01861 327 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 RLN2P04090 185 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 OR13C7P0DN81 318 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 AREGP15514 252 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 MDKP21741 143 aaPredicted RBP9.14□□□□□ -0.95
CDRT1-207ENST00000583965 S100A11P31949 105 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 SUB1P53999 127 aaKnown RBP eCLIP9.14□□□□□ -0.95
CDRT1-207ENST00000583965 ATP5IP56385 69 aaPredicted RBP9.14□□□□□ -0.95
CDRT1-207ENST00000583965 RIPPLY3P57055 190 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 PROK1P58294 105 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 IFITM2Q01629 132 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 KRTAP24-1Q3LI83 254 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 LRRC37A5PQ49AS3 106 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 SPINK9Q5DT21 86 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 ZNF114Q8NC26 417 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 TAF15Q92804 592 aaKnown RBP eCLIP9.14□□□□□ -0.95
CDRT1-207ENST00000583965 AQP10Q96PS8 301 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 RAB40CQ96S21 281 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 MFFQ9GZY8 342 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 HEYLQ9NQ87 328 aaPredicted RBP9.14□□□□□ -0.95
CDRT1-207ENST00000583965 U3KQ87 197 aa9.14□□□□□ -0.95
CDRT1-207ENST00000583965 E5RGE8 158 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 FBXO24O75426 580 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 IGLV1-40P01703 118 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 ELANEP08246 267 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 APELAP0DMC3 54 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 HIST1H1BP16401 226 aaKnown RBP9.13□□□□□ -0.95
CDRT1-207ENST00000583965 SNCAP37840 140 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 HTR2BP41595 481 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 TAS2R30P59541 319 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 POLR2GP62487 172 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDRT1-207ENST00000583965 RPP30P78346 268 aaKnown RBP9.13□□□□□ -0.95
CDRT1-207ENST00000583965 FOXE3Q13461 319 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 OPCMLQ14982 345 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 KLK9Q2XQG4 91 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 TEX38Q6PEX7 206 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 TMUB2Q71RG4 321 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 KLHDC1Q8N7A1 406 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 INO80EQ8NBZ0 244 aaPredicted RBP9.13□□□□□ -0.95
CDRT1-207ENST00000583965 OR5T1Q8NG75 326 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 OR1P1Q8NH06 330 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 WIPF2Q8TF74 440 aaPredicted RBP9.13□□□□□ -0.95
CDRT1-207ENST00000583965 MAGT1Q9H0U3 335 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 OR5AC2Q9NZP5 309 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 KLK9Q9UKQ9 250 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 RCL1Q9Y2P8 373 aaKnown RBP9.13□□□□□ -0.95
CDRT1-207ENST00000583965 F11RQ9Y624 299 aaKnown RBP9.13□□□□□ -0.95
CDRT1-207ENST00000583965 TENM1Q9UKZ4 2725 aa9.13□□□□□ -0.95
CDRT1-207ENST00000583965 COL6A5A8TX70 2615 aa9.12□□□□□ -0.95
CDRT1-207ENST00000583965 SSSCA1O60232 199 aa9.12□□□□□ -0.95
CDRT1-207ENST00000583965 SOX15O60248 233 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms