RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 TRBV11-1A0A0K0K1C0 115 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 KIR2DS1A0A191URI9 304 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 SMCO3A2RU48 225 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 FBLL1A6NHQ2 334 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 SLC22A20A6NK97 555 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 H0Y980 276 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 TMEM250H0YL14 139 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 ANGPTL7O43827 346 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 CBR3O75828 277 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 TYMSP04818 313 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 KLK3P07288 261 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 PGA5P0DJD9 388 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 GZMBP10144 247 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 COX5BP10606 129 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 FGF7P21781 194 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 F2RP25116 425 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 HOXA6P31267 233 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 APLNRP35414 380 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 MDH2P40926 338 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 KIR2DS4P43632 304 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 RBM11P57052 281 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 FXYD4P59646 89 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 SPCS3P61009 180 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 FGF12P61328 243 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 PCBD1P61457 104 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 NDPQ00604 133 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 SRSF9Q13242 221 aaKnown RBP eCLIP3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 KIR2DS1Q14954 304 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 ATP6V1FQ16864 119 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 TMEM241Q24JQ0 296 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 LRRC75BQ2VPJ9 315 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 DEFB133Q30KQ1 61 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 NKAIN1Q4KMZ8 207 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 TSPO2Q5TGU0 170 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 RAET1LQ5VY80 246 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 WDR25Q64LD2 544 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 RNASEKQ6P5S7 137 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 MRPL52Q86TS9 123 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 LINC00596Q86U02 117 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 OR10A7Q8NGE5 316 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 OR51G1Q8NGK1 321 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 OR5L1Q8NGL2 311 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 OR11L1Q8NGX0 322 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 OR4X1Q8NH49 305 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 RNASE11Q8TAA1 199 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 GPR146Q96CH1 333 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 BTF3L4Q96K17 158 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 HIST1H2BLQ99880 126 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 PROK2Q9HC23 129 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 SH2D2AQ9NP31 389 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 RPRMQ9NS64 109 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 TNFRSF19Q9NS68 423 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 TAAR3PQ9P1P4 343 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 NAT8Q9UHE5 227 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 TIMM9Q9Y5J7 89 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 RFNGQ9Y644 331 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 CHCHD2Q9Y6H1 151 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 FREM3P0C091 2139 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 PHF3Q92576 2039 aaKnown RBP3□□□□□ -1.93
SMCHD1-208ENST00000583344 LAMA2P24043 3122 aaKnown RBP3□□□□□ -1.93
SMCHD1-208ENST00000583344 EXPH5Q8NEV8 1989 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 A0A0J9YW62 118 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 ZNF816-ZNF321PA0A0X1KG74 233 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 A0A1B0GV90 55 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 EPOPA6NHQ4 379 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 GJE1A6NN92 205 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3□□□□□ -1.93
SMCHD1-208ENST00000583344 SYNGR2O43760 224 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 SOX15O60248 233 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 GGCTO75223 188 aaKnown RBP3□□□□□ -1.93
SMCHD1-208ENST00000583344 OR2J2O76002 312 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 CST7O76096 145 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 VENTXO95231 258 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 IFNA1P01562 189 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 MBP02144 154 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 OPN1LWP04000 364 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 MMP7P09237 267 aaPredicted RBP3□□□□□ -1.93
SMCHD1-208ENST00000583344 SCTP09683 121 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 BCL2P10415 239 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 CD99P14209 185 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 FABP4P15090 132 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 MDKP21741 143 aaPredicted RBP3□□□□□ -1.93
SMCHD1-208ENST00000583344 S100GP29377 79 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 SRP14P37108 136 aaKnown RBP3□□□□□ -1.93
SMCHD1-208ENST00000583344 ID1P41134 155 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 PSG4Q00888 419 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 ZNF154Q13106 437 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 ZNF726P1Q15940 193 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 CEACAM21Q3KPI0 293 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 PIGYQ3MUY2 71 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 DMRTC1Q5HYR2 192 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 BTNL3Q6UXE8 466 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 ZNF818PQ6ZRF7 136 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 CYP2G1PQ6ZSU1 146 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 MOB3BQ86TA1 216 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 MKXQ8IYA7 352 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 PRSS58Q8IYP2 241 aa3□□□□□ -1.93
SMCHD1-208ENST00000583344 GAPTQ8N292 157 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms