RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 HIST1H1BP16401 226 aaKnown RBP12.53□□□□□ -0.4
RARA-209ENST00000579727 SYNJ2BPP57105 145 aa12.53□□□□□ -0.4
RARA-209ENST00000579727 PRCDQ00LT1 54 aa12.53□□□□□ -0.4
RARA-209ENST00000579727 RPEL1Q2QD12 228 aa12.53□□□□□ -0.4
RARA-209ENST00000579727 SLC25A24Q6NUK1 477 aa12.53□□□□□ -0.4
RARA-209ENST00000579727 Q6ZRM9 215 aa12.53□□□□□ -0.4
RARA-209ENST00000579727 HAPLN4Q86UW8 402 aa12.53□□□□□ -0.4
RARA-209ENST00000579727 SLC35G3Q8N808 338 aa12.53□□□□□ -0.4
RARA-209ENST00000579727 RBPMSQ93062 196 aaKnown RBP12.53□□□□□ -0.4
RARA-209ENST00000579727 CCDC140Q96MF4 163 aa12.53□□□□□ -0.4
RARA-209ENST00000579727 ZC4H2Q9NQZ6 224 aa12.53□□□□□ -0.4
RARA-209ENST00000579727 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.52□□□□□ -0.41
RARA-209ENST00000579727 NXPH3O95157 252 aa12.52□□□□□ -0.41
RARA-209ENST00000579727 IFNA17P01571 189 aa12.52□□□□□ -0.41
RARA-209ENST00000579727 ZP3P21754 424 aa12.52□□□□□ -0.41
RARA-209ENST00000579727 HSPE1P61604 102 aaKnown RBP12.52□□□□□ -0.41
RARA-209ENST00000579727 CLEC19AQ6UXS0 136 aa12.52□□□□□ -0.41
RARA-209ENST00000579727 HSD17B13Q7Z5P4 300 aaPredicted RBP12.52□□□□□ -0.41
RARA-209ENST00000579727 DEDD2Q8WXF8 326 aa12.52□□□□□ -0.41
RARA-209ENST00000579727 EEF1AKMT3Q96AZ1 226 aa12.52□□□□□ -0.41
RARA-209ENST00000579727 GPR146Q96CH1 333 aa12.52□□□□□ -0.41
RARA-209ENST00000579727 GALNT14Q96FL9 552 aa12.52□□□□□ -0.41
RARA-209ENST00000579727 KCNIP3Q9Y2W7 256 aa12.52□□□□□ -0.41
RARA-209ENST00000579727 F11RQ9Y624 299 aaKnown RBP12.52□□□□□ -0.41
RARA-209ENST00000579727 VAMP1P23763 118 aa12.51□□□□□ -0.41
RARA-209ENST00000579727 BTCP35070 178 aa12.51□□□□□ -0.41
RARA-209ENST00000579727 EGFEM1PQ0D2K5 195 aa12.51□□□□□ -0.41
RARA-209ENST00000579727 RBMS2Q15434 407 aaKnown RBP12.51□□□□□ -0.41
RARA-209ENST00000579727 KLK9Q2XQG4 91 aa12.51□□□□□ -0.41
RARA-209ENST00000579727 ZNF429Q86V71 674 aa12.51□□□□□ -0.41
RARA-209ENST00000579727 SLC25A21Q9BQT8 299 aaPredicted RBP12.51□□□□□ -0.41
RARA-209ENST00000579727 PDCD10Q9BUL8 212 aa12.51□□□□□ -0.41
RARA-209ENST00000579727 PLEKHA3Q9HB20 300 aa12.51□□□□□ -0.41
RARA-209ENST00000579727 CACNG5Q9UF02 275 aa12.51□□□□□ -0.41
RARA-209ENST00000579727 KLK9Q9UKQ9 250 aa12.51□□□□□ -0.41
RARA-209ENST00000579727 FLVCR2Q9UPI3 526 aa12.51□□□□□ -0.41
RARA-209ENST00000579727 TMEM56-RWDD3S4R434 201 aa12.51□□□□□ -0.41
RARA-209ENST00000579727 WI2-2373I1.2A0A1W2PRP0 233 aa12.5□□□□□ -0.41
RARA-209ENST00000579727 NAP1L6A6NFF2 107 aa12.5□□□□□ -0.41
RARA-209ENST00000579727 ANXA3P12429 323 aa12.5□□□□□ -0.41
RARA-209ENST00000579727 ARL3P36405 182 aa12.5□□□□□ -0.41
RARA-209ENST00000579727 HOXA1P49639 335 aaPredicted RBP12.5□□□□□ -0.41
RARA-209ENST00000579727 KLF5Q13887 457 aaPredicted RBP12.5□□□□□ -0.41
RARA-209ENST00000579727 ACSM6Q6P461 480 aa12.5□□□□□ -0.41
RARA-209ENST00000579727 LYZL2Q7Z4W2 148 aa12.5□□□□□ -0.41
RARA-209ENST00000579727 CENPSQ8N2Z9 138 aa12.5□□□□□ -0.41
RARA-209ENST00000579727 OR2C3Q8N628 320 aa12.5□□□□□ -0.41
RARA-209ENST00000579727 PTTG2Q9NZH5 202 aa12.5□□□□□ -0.41
RARA-209ENST00000579727 CENPXA8MT69 81 aa12.49□□□□□ -0.41
RARA-209ENST00000579727 NDUFB6O95139 128 aa12.49□□□□□ -0.41
RARA-209ENST00000579727 GPR183P32249 361 aa12.49□□□□□ -0.41
RARA-209ENST00000579727 PPP1R1AQ13522 171 aa12.49□□□□□ -0.41
RARA-209ENST00000579727 ANKRD55Q3KP44 614 aa12.49□□□□□ -0.41
RARA-209ENST00000579727 TMEM128Q5BJH2 165 aa12.49□□□□□ -0.41
RARA-209ENST00000579727 C11orf87Q6NUJ2 197 aa12.49□□□□□ -0.41
RARA-209ENST00000579727 FAM219AQ8IW50 185 aa12.49□□□□□ -0.41
RARA-209ENST00000579727 MRAPQ8TCY5 172 aa12.49□□□□□ -0.41
RARA-209ENST00000579727 MISP3Q96FF7 219 aa12.49□□□□□ -0.41
RARA-209ENST00000579727 CXorf58Q96LI9 332 aa12.49□□□□□ -0.41
RARA-209ENST00000579727 PRR25Q96S07 402 aa12.49□□□□□ -0.41
RARA-209ENST00000579727 THYN1Q9P016 225 aa12.49□□□□□ -0.41
RARA-209ENST00000579727 K7EIL1 84 aa12.48□□□□□ -0.41
RARA-209ENST00000579727 PLA2G10O15496 165 aa12.48□□□□□ -0.41
RARA-209ENST00000579727 CYB5BO43169 146 aa12.48□□□□□ -0.41
RARA-209ENST00000579727 OR2C1O95371 312 aa12.48□□□□□ -0.41
RARA-209ENST00000579727 EDN2P20800 178 aa12.48□□□□□ -0.41
RARA-209ENST00000579727 LGI3Q8N145 548 aa12.48□□□□□ -0.41
RARA-209ENST00000579727 UBAC2Q8NBM4 344 aa12.48□□□□□ -0.41
RARA-209ENST00000579727 OR9G4Q8NGQ1 327 aa12.48□□□□□ -0.41
RARA-209ENST00000579727 ZNF502Q8TBZ5 544 aa12.48□□□□□ -0.41
RARA-209ENST00000579727 IL22RA2Q969J5 263 aa12.48□□□□□ -0.41
RARA-209ENST00000579727 PINX1Q96BK5 328 aaKnown RBP12.48□□□□□ -0.41
RARA-209ENST00000579727 TRBV7-1A0A0A6YYK4 115 aa12.47□□□□□ -0.41
RARA-209ENST00000579727 IGHV3-35A0A0C4DH35 117 aa12.47□□□□□ -0.41
RARA-209ENST00000579727 K7EIM0 57 aa12.47□□□□□ -0.41
RARA-209ENST00000579727 SFT2D2O95562 160 aa12.47□□□□□ -0.41
RARA-209ENST00000579727 LY86O95711 162 aa12.47□□□□□ -0.41
RARA-209ENST00000579727 IGHV3-48P01763 117 aa12.47□□□□□ -0.41
RARA-209ENST00000579727 CLEC3BP05452 202 aa12.47□□□□□ -0.41
RARA-209ENST00000579727 ERHP84090 104 aaKnown RBP12.47□□□□□ -0.41
RARA-209ENST00000579727 OR1P1Q8NH06 330 aa12.47□□□□□ -0.41
RARA-209ENST00000579727 OR4C12Q96R67 309 aa12.47□□□□□ -0.41
RARA-209ENST00000579727 C7orf50Q9BRJ6 194 aaKnown RBP12.47□□□□□ -0.41
RARA-209ENST00000579727 ELOVL1Q9BW60 279 aa12.47□□□□□ -0.41
RARA-209ENST00000579727 ENY2Q9NPA8 101 aa12.47□□□□□ -0.41
RARA-209ENST00000579727 BATF3Q9NR55 127 aa12.47□□□□□ -0.41
RARA-209ENST00000579727 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.47□□□□□ -0.41
RARA-209ENST00000579727 A0A0B4J2A0 478 aa12.46□□□□□ -0.41
RARA-209ENST00000579727 OR2T8A6NH00 312 aa12.46□□□□□ -0.41
RARA-209ENST00000579727 LYRM1O43325 122 aa12.46□□□□□ -0.41
RARA-209ENST00000579727 GGCTO75223 188 aaKnown RBP12.46□□□□□ -0.41
RARA-209ENST00000579727 SULT1A3P0DMM9 295 aa12.46□□□□□ -0.41
RARA-209ENST00000579727 SULT1A4P0DMN0 295 aa12.46□□□□□ -0.41
RARA-209ENST00000579727 ANXA7P20073 488 aaKnown RBP12.46□□□□□ -0.41
RARA-209ENST00000579727 SRPXP78539 464 aa12.46□□□□□ -0.41
RARA-209ENST00000579727 NMSQ5H8A3 153 aa12.46□□□□□ -0.41
RARA-209ENST00000579727 IL34Q6ZMJ4 242 aa12.46□□□□□ -0.41
RARA-209ENST00000579727 REC114Q7Z4M0 266 aa12.46□□□□□ -0.41
RARA-209ENST00000579727 ZNF114Q8NC26 417 aa12.46□□□□□ -0.41
RARA-209ENST00000579727 VN1R17PQ8TDU5 208 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms