RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 LGALS14Q8TCE9 139 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 GIMAP1Q8WWP7 306 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 BORCS5Q969J3 196 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 DGCR14Q96DF8 476 aaKnown RBP6.25□□□□□ -1.41
CASC3-206ENST00000579238 ZNF414Q96IQ9 312 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 OR10C1Q96KK4 312 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 HINT2Q9BX68 163 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 HRH4Q9H3N8 390 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 RHBDL2Q9NX52 303 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 BLOC1S6Q9UL45 172 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 APLNQ9ULZ1 77 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 OR51B2Q9Y5P1 312 aa6.25□□□□□ -1.41
CASC3-206ENST00000579238 TRAV18A0A075B6X5 111 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 IGHV3-49A0A0A0MS15 119 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 TRAV14DV4A0A0A6YYC5 116 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 A0A0A6YYH2 397 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 A6NJ64 397 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 C15orf61A6NNL5 157 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 DEFB4AO15263 64 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 SNAPC5O75971 98 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 DFFBO76075 338 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 YIF1AO95070 293 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 CD5P06127 495 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 F2RP25116 425 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 GNRHRP30968 328 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 MFAP4P55083 255 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 SCAND1P57086 179 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 SFXN4Q6P4A7 337 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 TMEM17Q86X19 198 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 GBGT1Q8N5D6 347 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 OR1P1Q8NH06 330 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 NRG4Q8WWG1 115 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 TMEM56Q96MV1 263 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 TXN2Q99757 166 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 TXNL4BQ9NX01 149 aaKnown RBP6.24□□□□□ -1.41
CASC3-206ENST00000579238 FKBP11Q9NYL4 201 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 PRNDQ9UKY0 176 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 NSG2Q9Y328 171 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 RRP15Q9Y3B9 282 aaKnown RBP6.24□□□□□ -1.41
CASC3-206ENST00000579238 KIAA1109Q2LD37 5005 aa6.24□□□□□ -1.41
CASC3-206ENST00000579238 FAT2Q9NYQ8 4349 aa6.23□□□□□ -1.41
CASC3-206ENST00000579238 I3L2K1 104 aa6.23□□□□□ -1.41
CASC3-206ENST00000579238 KRASP01116 189 aa6.23□□□□□ -1.41
CASC3-206ENST00000579238 EIF4EP06730 217 aaKnown RBP6.23□□□□□ -1.41
CASC3-206ENST00000579238 CBX5P45973 191 aa6.23□□□□□ -1.41
CASC3-206ENST00000579238 HERV-K104P61576 105 aa6.23□□□□□ -1.41
CASC3-206ENST00000579238 TCF24Q7RTU0 167 aa6.23□□□□□ -1.41
CASC3-206ENST00000579238 Q8NAQ8 132 aa6.23□□□□□ -1.41
CASC3-206ENST00000579238 OR5AP2Q8NGF4 316 aa6.23□□□□□ -1.41
CASC3-206ENST00000579238 FCAMRQ8WWV6 532 aa6.23□□□□□ -1.41
CASC3-206ENST00000579238 SLC25A46Q96AG3 418 aa6.23□□□□□ -1.41
CASC3-206ENST00000579238 SLC25A38Q96DW6 304 aa6.23□□□□□ -1.41
CASC3-206ENST00000579238 NXF2Q9GZY0 626 aaKnown RBP6.23□□□□□ -1.41
CASC3-206ENST00000579238 PCLOQ9Y6V0 5065 aa6.23□□□□□ -1.41
CASC3-206ENST00000579238 DNAH2Q9P225 4427 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 PKHD1P08F94 4074 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 IGHV3OR16-13A0A075B7E8 117 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 IGHV3-74A0A0B4J1X5 117 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 TRAV2A0A0B4J234 112 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 DNASE2O00115 360 aaPredicted RBP6.22□□□□□ -1.41
CASC3-206ENST00000579238 XRCC3O43542 346 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 PGLYRP1O75594 196 aaPredicted RBP6.22□□□□□ -1.41
CASC3-206ENST00000579238 RLN1P04808 185 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 FCER2P06734 321 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 MED14OSP0DP75 135 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 G6PCP35575 357 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 LPAR6P43657 344 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 DEFB131AP59861 70 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 TMEM41BQ5BJD5 291 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 UBE2UQ5VVX9 321 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 LEMD1Q68G75 181 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 DHRS11Q6UWP2 260 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 STHQ8IWL8 128 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 TSPAN14Q8NG11 270 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 OR5H6Q8NGV6 325 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 MOB3AQ96BX8 217 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 MISP3Q96FF7 219 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 CNBD2Q96M20 576 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 TSC22D3Q99576 134 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 GINS3Q9BRX5 216 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 MS4A6AQ9H2W1 248 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 VSIRQ9H7M9 311 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 AUNIPQ9H7T9 357 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 DIABLOQ9NR28 239 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 TMEM14BQ9NUH8 114 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 SSR3Q9UNL2 185 aa6.22□□□□□ -1.41
CASC3-206ENST00000579238 IGHV4-4A0A075B6R2 117 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 TRAV10A0A0B4J240 114 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 IGHV4-28A0A0C4DH34 117 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 A0A1B0GVY2 172 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 DBX1A6NMT0 343 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 ST8SIA3O43173 380 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 GNG7O60262 68 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 MT-CO2P00403 227 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 GIG44P09565 113 aaPredicted RBP6.21□□□□□ -1.42
CASC3-206ENST00000579238 RBMY1A1P0DJD3 496 aaKnown RBP6.21□□□□□ -1.42
CASC3-206ENST00000579238 RBMY1CP0DJD4 496 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 MIFP14174 115 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 PSMB9P28065 219 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 HLA-DMBP28068 263 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms