RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 FAM219AQ8IW50 185 aa11.05□□□□□ -0.64
MKS1-207ENST00000578789 OR2C3Q8N628 320 aa11.05□□□□□ -0.64
MKS1-207ENST00000578789 ZNF114Q8NC26 417 aa11.05□□□□□ -0.64
MKS1-207ENST00000578789 OR9G4Q8NGQ1 327 aa11.05□□□□□ -0.64
MKS1-207ENST00000578789 OR1L6Q8NGR2 347 aa11.05□□□□□ -0.64
MKS1-207ENST00000578789 LHFPL5Q8TAF8 219 aa11.05□□□□□ -0.64
MKS1-207ENST00000578789 RBPMSQ93062 196 aaKnown RBP11.05□□□□□ -0.64
MKS1-207ENST00000578789 ELOVL1Q9BW60 279 aa11.05□□□□□ -0.64
MKS1-207ENST00000578789 TRBV7-1A0A0A6YYK4 115 aa11.04□□□□□ -0.64
MKS1-207ENST00000578789 A0A0B4J293 547 aa11.04□□□□□ -0.64
MKS1-207ENST00000578789 A0A0G2JRQ6 117 aa11.04□□□□□ -0.64
MKS1-207ENST00000578789 INS-IGF2F8WCM5 200 aa11.04□□□□□ -0.64
MKS1-207ENST00000578789 MECP2P51608 486 aaKnown RBP11.04□□□□□ -0.64
MKS1-207ENST00000578789 AARDQ4LEZ3 155 aa11.04□□□□□ -0.64
MKS1-207ENST00000578789 IL34Q6ZMJ4 242 aa11.04□□□□□ -0.64
MKS1-207ENST00000578789 SGPP2Q8IWX5 399 aa11.04□□□□□ -0.64
MKS1-207ENST00000578789 ZNF502Q8TBZ5 544 aa11.04□□□□□ -0.64
MKS1-207ENST00000578789 VN1R17PQ8TDU5 208 aa11.04□□□□□ -0.64
MKS1-207ENST00000578789 IL22RA2Q969J5 263 aa11.04□□□□□ -0.64
MKS1-207ENST00000578789 RRNAD1Q96FB5 475 aaKnown RBP11.04□□□□□ -0.64
MKS1-207ENST00000578789 OR4C12Q96R67 309 aa11.04□□□□□ -0.64
MKS1-207ENST00000578789 SDHCQ99643 169 aaPredicted RBP11.04□□□□□ -0.64
MKS1-207ENST00000578789 SIGLEC8Q9NYZ4 499 aa11.04□□□□□ -0.64
MKS1-207ENST00000578789 ZNF256Q9Y2P7 627 aaPredicted RBP11.04□□□□□ -0.64
MKS1-207ENST00000578789 TMEM56-RWDD3S4R434 201 aa11.04□□□□□ -0.64
MKS1-207ENST00000578789 PPP5D1E7EU14 171 aa11.03□□□□□ -0.64
MKS1-207ENST00000578789 GGCTO75223 188 aaKnown RBP11.03□□□□□ -0.64
MKS1-207ENST00000578789 IGHV3-23P01764 117 aa11.03□□□□□ -0.64
MKS1-207ENST00000578789 ARL3P36405 182 aa11.03□□□□□ -0.64
MKS1-207ENST00000578789 SUPT4H1P63272 117 aaKnown RBP11.03□□□□□ -0.64
MKS1-207ENST00000578789 TMEM187Q14656 261 aa11.03□□□□□ -0.64
MKS1-207ENST00000578789 BAK1Q16611 211 aa11.03□□□□□ -0.64
MKS1-207ENST00000578789 TATDN3Q17R31 274 aa11.03□□□□□ -0.64
MKS1-207ENST00000578789 CLEC19AQ6UXS0 136 aa11.03□□□□□ -0.64
MKS1-207ENST00000578789 SELENOHQ8IZQ5 122 aaKnown RBP11.03□□□□□ -0.64
MKS1-207ENST00000578789 OR1P1Q8NH06 330 aa11.03□□□□□ -0.64
MKS1-207ENST00000578789 SLC25A21Q9BQT8 299 aaPredicted RBP11.03□□□□□ -0.64
MKS1-207ENST00000578789 PLEKHA3Q9HB20 300 aa11.03□□□□□ -0.64
MKS1-207ENST00000578789 S4R3C0 116 aa11.03□□□□□ -0.64
MKS1-207ENST00000578789 ST8SIA3O43173 380 aa11.02□□□□□ -0.65
MKS1-207ENST00000578789 IGLV1-51P01701 117 aa11.02□□□□□ -0.65
MKS1-207ENST00000578789 CSN3P07498 182 aa11.02□□□□□ -0.65
MKS1-207ENST00000578789 DCTN2Q13561 401 aaKnown RBP11.02□□□□□ -0.65
MKS1-207ENST00000578789 TMEM268Q5VZI3 342 aa11.02□□□□□ -0.65
MKS1-207ENST00000578789 TRIQKQ629K1 86 aa11.02□□□□□ -0.65
MKS1-207ENST00000578789 ZNF57Q68EA5 555 aaPredicted RBP11.02□□□□□ -0.65
MKS1-207ENST00000578789 SLC25A24Q6NUK1 477 aa11.02□□□□□ -0.65
MKS1-207ENST00000578789 Q6ZRM9 215 aa11.02□□□□□ -0.65
MKS1-207ENST00000578789 GPHB5Q86YW7 130 aa11.02□□□□□ -0.65
MKS1-207ENST00000578789 RNASE11Q8TAA1 199 aaKnown RBP11.02□□□□□ -0.65
MKS1-207ENST00000578789 PRR25Q96S07 402 aa11.02□□□□□ -0.65
MKS1-207ENST00000578789 ATP6V0BQ99437 205 aa11.02□□□□□ -0.65
MKS1-207ENST00000578789 PEMTQ9UBM1 199 aa11.02□□□□□ -0.65
MKS1-207ENST00000578789 KCNIP3Q9Y2W7 256 aa11.02□□□□□ -0.65
MKS1-207ENST00000578789 NAP1L6A6NFF2 107 aa11.01□□□□□ -0.65
MKS1-207ENST00000578789 K7EIM0 57 aa11.01□□□□□ -0.65
MKS1-207ENST00000578789 LGALS9O00182 355 aa11.01□□□□□ -0.65
MKS1-207ENST00000578789 AKR1C4P17516 323 aa11.01□□□□□ -0.65
MKS1-207ENST00000578789 SLC35G3Q8N808 338 aa11.01□□□□□ -0.65
MKS1-207ENST00000578789 OR52E5Q8NH55 327 aa11.01□□□□□ -0.65
MKS1-207ENST00000578789 PDCD10Q9BUL8 212 aa11.01□□□□□ -0.65
MKS1-207ENST00000578789 SORL1Q92673 2214 aa11□□□□□ -0.65
MKS1-207ENST00000578789 A6NHS1 94 aa11□□□□□ -0.65
MKS1-207ENST00000578789 OR2C1O95371 312 aa11□□□□□ -0.65
MKS1-207ENST00000578789 HLA-AP01891 365 aaKnown RBP11□□□□□ -0.65
MKS1-207ENST00000578789 CLEC3BP05452 202 aa11□□□□□ -0.65
MKS1-207ENST00000578789 ANXA3P12429 323 aa11□□□□□ -0.65
MKS1-207ENST00000578789 SPNP16150 400 aa11□□□□□ -0.65
MKS1-207ENST00000578789 GPR183P32249 361 aa11□□□□□ -0.65
MKS1-207ENST00000578789 INPP1P49441 399 aa11□□□□□ -0.65
MKS1-207ENST00000578789 SRPXP78539 464 aa11□□□□□ -0.65
MKS1-207ENST00000578789 ERHP84090 104 aaKnown RBP11□□□□□ -0.65
MKS1-207ENST00000578789 RBMS2Q15434 407 aaKnown RBP11□□□□□ -0.65
MKS1-207ENST00000578789 TMEM128Q5BJH2 165 aa11□□□□□ -0.65
MKS1-207ENST00000578789 PVRIGQ6DKI7 326 aa11□□□□□ -0.65
MKS1-207ENST00000578789 LINC00299Q6ZSB3 139 aa11□□□□□ -0.65
MKS1-207ENST00000578789 HAPLN4Q86UW8 402 aa11□□□□□ -0.65
MKS1-207ENST00000578789 SCARB1Q8WTV0 552 aa11□□□□□ -0.65
MKS1-207ENST00000578789 GPR146Q96CH1 333 aa11□□□□□ -0.65
MKS1-207ENST00000578789 C21orf62Q9NYP8 219 aa11□□□□□ -0.65
MKS1-207ENST00000578789 PRR13Q9NZ81 148 aa11□□□□□ -0.65
MKS1-207ENST00000578789 CACNG5Q9UF02 275 aa11□□□□□ -0.65
MKS1-207ENST00000578789 LSM4Q9Y4Z0 139 aaKnown RBP11□□□□□ -0.65
MKS1-207ENST00000578789 TGP01266 2768 aa10.99□□□□□ -0.65
MKS1-207ENST00000578789 A0A0B4J2A0 478 aa10.99□□□□□ -0.65
MKS1-207ENST00000578789 A8MWP6 167 aa10.99□□□□□ -0.65
MKS1-207ENST00000578789 F8W735 103 aaPredicted RBP10.99□□□□□ -0.65
MKS1-207ENST00000578789 TGOLN2O43493 480 aa10.99□□□□□ -0.65
MKS1-207ENST00000578789 IFNA17P01571 189 aa10.99□□□□□ -0.65
MKS1-207ENST00000578789 IL7P13232 177 aa10.99□□□□□ -0.65
MKS1-207ENST00000578789 GP9P14770 177 aa10.99□□□□□ -0.65
MKS1-207ENST00000578789 SPCS3P61009 180 aa10.99□□□□□ -0.65
MKS1-207ENST00000578789 SPINK9Q5DT21 86 aa10.99□□□□□ -0.65
MKS1-207ENST00000578789 NMSQ5H8A3 153 aa10.99□□□□□ -0.65
MKS1-207ENST00000578789 TMED4Q7Z7H5 227 aa10.99□□□□□ -0.65
MKS1-207ENST00000578789 LGI3Q8N145 548 aa10.99□□□□□ -0.65
MKS1-207ENST00000578789 BSCL2Q96G97 398 aaPredicted RBP10.99□□□□□ -0.65
MKS1-207ENST00000578789 C7orf50Q9BRJ6 194 aaKnown RBP10.99□□□□□ -0.65
MKS1-207ENST00000578789 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.99□□□□□ -0.65
MKS1-207ENST00000578789 SHPKQ9UHJ6 478 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms