RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 ATG2BQ96BY7 2078 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 FAM159AQ6UWV7 190 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 A0A1W2PRS3 328 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 NUTF2P61970 127 aaKnown RBP9.03□□□□□ -0.96
SEC22B-201ENST00000578049 ATP5G2Q06055 141 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 HSD52Q0P140 79 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 MOB4Q9Y3A3 225 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 UPK2O00526 184 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 FER1L6-AS1Q8NA97 138 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 TSKUQ8WUA8 353 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 WBP1Q96G27 269 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 TMEM160Q9NX00 188 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 RNF115Q9Y4L5 304 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 HILPDAQ9Y5L2 63 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 H7C2G1 150 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 GHRHP01286 108 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 ASIPP42127 132 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 SGK494Q96LW2 274 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 ZIC3O60481 467 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 ADMP35318 185 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 TIMP4Q99727 224 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 SLC50A1Q9BRV3 221 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 DPM3Q9P2X0 92 aa9.03□□□□□ -0.96
SEC22B-201ENST00000578049 TGFBR3LH3BV60 316 aa9.02□□□□□ -0.96
SEC22B-201ENST00000578049 ZNF883P0CG24 379 aa9.02□□□□□ -0.96
SEC22B-201ENST00000578049 GFRA1P56159 465 aa9.02□□□□□ -0.96
SEC22B-201ENST00000578049 RPL39P5Q59GN2 51 aa9.02□□□□□ -0.96
SEC22B-201ENST00000578049 RNFT1Q5M7Z0 435 aa9.02□□□□□ -0.96
SEC22B-201ENST00000578049 OR13A1Q8NGR1 328 aa9.02□□□□□ -0.96
SEC22B-201ENST00000578049 OR2K2Q8NGT1 345 aa9.02□□□□□ -0.96
SEC22B-201ENST00000578049 ORAOV1Q8WV07 137 aa9.02□□□□□ -0.96
SEC22B-201ENST00000578049 IGKV3-7A0A075B6H7 116 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 TRAV24A0A0B4J272 114 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 ZNF497Q6ZNH5 498 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 VKORC1L1Q8N0U8 176 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 C10orf126Q8N4M7 172 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 IMMP1LQ96LU5 166 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 PGPEP1LA6NFU8 196 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 DLEU1O43261 78 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 NAPSAO96009 420 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 SNRPCP09234 159 aaKnown RBP9.02□□□□□ -0.97
SEC22B-201ENST00000578049 PF4V1P10720 104 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 TIMP3P35625 211 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 SNRPD3P62318 126 aaKnown RBP9.02□□□□□ -0.97
SEC22B-201ENST00000578049 TFF2Q03403 129 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 MIR17HGQ75NE6 70 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 SCGB3A1Q96QR1 104 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 PILRBQ9UKJ0 227 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 LOC102723996A0A087X1L8 192 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 MOSP00540 346 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 C1QTNF9P0C862 333 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 PAX1P15863 534 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 DERL1Q9BUN8 251 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 FSCN3Q9NQT6 498 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 UBE2L6O14933 153 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 CD69Q07108 199 aa9.02□□□□□ -0.97
SEC22B-201ENST00000578049 ARID2Q68CP9 1835 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 WDR82Q6UXN9 313 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 Q6ZS49 121 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 C21orf62Q9NYP8 219 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 EPDR1Q9UM22 224 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 IGKV1D-13A0A0B4J2D9 117 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 PRR32B1ATL7 298 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 PROB1E7EW31 1015 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 H3BRM9 83 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 IGKV1-13P0DP09 117 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 PRCDQ00LT1 54 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 TMEM50AO95807 157 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 CTSBP07858 339 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 SUPT4H1P63272 117 aaKnown RBP9.01□□□□□ -0.97
SEC22B-201ENST00000578049 SLC25A48Q6ZT89 311 aaKnown RBP9.01□□□□□ -0.97
SEC22B-201ENST00000578049 ZNF236Q9UL36 1845 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 IGHV1-69-2A0A0G2JMI3 117 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 FABP5P3A8MUU1 101 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 MEIG1Q5JSS6 88 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 FOXC2Q99958 501 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 Q9H3A6 140 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 PARP14Q460N5 1801 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 TRBV6-6A0A0A6YYG2 114 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 ZNF71Q9NQZ8 489 aaPredicted RBP9.01□□□□□ -0.97
SEC22B-201ENST00000578049 MRPL27Q9P0M9 148 aaKnown RBP9.01□□□□□ -0.97
SEC22B-201ENST00000578049 SHANK3Q9BYB0 1731 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 HTN1P15515 57 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 FAM19A2Q8N3H0 131 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 OCC1Q8TAD7 63 aa9.01□□□□□ -0.97
SEC22B-201ENST00000578049 CACNA1DQ01668 2161 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 FOXI3A8MTJ6 420 aaPredicted RBP9□□□□□ -0.97
SEC22B-201ENST00000578049 TMEM170BQ5T4T1 132 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 CLEC2AQ6UVW9 174 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 WFDC1Q9HC57 220 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 TCRBV4S1A1TA0A5B7 111 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 H3BUT2 72 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 CRYGSP22914 178 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 FOXL2P58012 376 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 ORMDL2Q53FV1 153 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 WFDC3Q8IUB2 231 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 DICER1Q9UPY3 1922 aaKnown RBP9□□□□□ -0.97
SEC22B-201ENST00000578049 PATE3B3GLJ2 98 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 CCL21O00585 134 aa9□□□□□ -0.97
SEC22B-201ENST00000578049 NMSQ5H8A3 153 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms