RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 STAG3L3P0CL85 134 aa12.13□□□□□ -0.47
CUEDC1-206ENST00000577830 CENPVQ7Z7K6 275 aaPredicted RBP12.13□□□□□ -0.47
CUEDC1-206ENST00000577830 GCSAMQ8N6F7 178 aa12.13□□□□□ -0.47
CUEDC1-206ENST00000577830 SIGLECL1Q8N7X8 197 aa12.13□□□□□ -0.47
CUEDC1-206ENST00000577830 OR4S2Q8NH73 311 aa12.13□□□□□ -0.47
CUEDC1-206ENST00000577830 ODF1Q14990 250 aa12.13□□□□□ -0.47
CUEDC1-206ENST00000577830 OR9G1Q8NH87 305 aa12.13□□□□□ -0.47
CUEDC1-206ENST00000577830 MRPL37Q9BZE1 423 aaKnown RBP12.13□□□□□ -0.47
CUEDC1-206ENST00000577830 OPRK1P41145 380 aa12.13□□□□□ -0.47
CUEDC1-206ENST00000577830 RPEL1Q2QD12 228 aa12.13□□□□□ -0.47
CUEDC1-206ENST00000577830 ACSF3Q4G176 576 aaPredicted RBP12.13□□□□□ -0.47
CUEDC1-206ENST00000577830 OR5AU1Q8NGC0 362 aa12.13□□□□□ -0.47
CUEDC1-206ENST00000577830 H1FXQ92522 213 aaKnown RBP12.13□□□□□ -0.47
CUEDC1-206ENST00000577830 VAMP8Q9BV40 100 aa12.13□□□□□ -0.47
CUEDC1-206ENST00000577830 MGST3O14880 152 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 MMP23AO75900 390 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 IGKV1-16P04430 117 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 RPL15P61313 204 aaKnown RBP12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 TIGITQ495A1 244 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 CT45A1Q5HYN5 189 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 C1orf122Q6ZSJ8 110 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 CT45A3Q8NHU0 189 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 RNASEH2CQ8TDP1 164 aaKnown RBP12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 CLUHP3Q96NS8 147 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 TANC2Q9HCD6 1990 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 TMPRSS2O15393 492 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 ZNF253O75346 499 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 LCN2P80188 198 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 Q6ZWC4 215 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 BHLHA15Q7RTS1 189 aaPredicted RBP12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 Q8N7P7 452 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 NABP2Q9BQ15 211 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 HES4Q9HCC6 221 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 WNT10AQ9GZT5 417 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 IFI27L2Q9H2X8 130 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 WNK2Q9Y3S1 2297 aa12.12□□□□□ -0.47
CUEDC1-206ENST00000577830 KMT2EQ8IZD2 1858 aa12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 REG1AP05451 166 aa12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 CAMPP49913 170 aa12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 ST6GALNAC3Q8NDV1 305 aa12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 ZCCHC14Q8WYQ9 949 aaKnown RBP12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 SPTBN1Q01082 2364 aaKnown RBP12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 MKRN2OSH3BPM6 223 aa12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 OR5G3P0C626 314 aa12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 APC2O95996 2303 aa12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 TACC2O95359 2948 aa12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 AKAP6Q13023 2319 aa12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 TRGV10A0A0A0MS01 117 aa12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 VDAC2P45880 294 aaPredicted RBP12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 BLNKQ8WV28 456 aa12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 C2orf88Q9BSF0 95 aa12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 SLC35D1Q9NTN3 355 aa12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 TMEM106BQ9NUM4 274 aa12.11□□□□□ -0.47
CUEDC1-206ENST00000577830 GOSR1O95249 250 aa12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 IRF2P14316 349 aa12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 CHRNB4P30926 498 aa12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 KLF3P57682 345 aaPredicted RBP12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 HSPE1P61604 102 aaKnown RBP12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 EIF4EBP1Q13541 118 aaPredicted RBP12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 OR2T6Q8NHC8 308 aa12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 SARAFQ96BY9 339 aa12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 EAF1Q96JC9 268 aaPredicted RBP12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 IGHV3-72A0A0B4J1Y9 119 aa12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 ENSAO43768 121 aaKnown RBP12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 WNT2P09544 360 aa12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 SRIP30626 198 aa12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 NUTF2P61970 127 aaKnown RBP12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 C10orf55Q5SWW7 151 aa12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 CLCF1Q9UBD9 225 aa12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 TET2Q6N021 2002 aaPredicted RBP12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 IGKV3-15P01624 115 aa12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 IL36BQ9NZH7 164 aa12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 CEP295Q9C0D2 2601 aa12.1□□□□□ -0.47
CUEDC1-206ENST00000577830 FTH1P19P0C7X4 201 aa12.09□□□□□ -0.47
CUEDC1-206ENST00000577830 JPT1Q9UK76 154 aa12.09□□□□□ -0.47
CUEDC1-206ENST00000577830 H0Y8G0 127 aa12.09□□□□□ -0.47
CUEDC1-206ENST00000577830 MPDU1O75352 247 aa12.09□□□□□ -0.47
CUEDC1-206ENST00000577830 PYYP10082 97 aa12.09□□□□□ -0.47
CUEDC1-206ENST00000577830 WT1P19544 449 aaPredicted RBP12.09□□□□□ -0.47
CUEDC1-206ENST00000577830 UBE2L3P68036 154 aaKnown RBP12.09□□□□□ -0.47
CUEDC1-206ENST00000577830 COA6Q5JTJ3 125 aaKnown RBP12.09□□□□□ -0.47
CUEDC1-206ENST00000577830 ZGRF1Q86YA3 2104 aa12.09□□□□□ -0.47
CUEDC1-206ENST00000577830 GPR6P46095 362 aaPredicted RBP12.09□□□□□ -0.47
CUEDC1-206ENST00000577830 TNFAIP6P98066 277 aaPredicted RBP12.09□□□□□ -0.47
CUEDC1-206ENST00000577830 LOXL4Q96JB6 756 aa12.09□□□□□ -0.47
CUEDC1-206ENST00000577830 TXN2Q99757 166 aa12.09□□□□□ -0.47
CUEDC1-206ENST00000577830 GNB4Q9HAV0 340 aa12.09□□□□□ -0.47
CUEDC1-206ENST00000577830 KALRNO60229 2985 aa12.08□□□□□ -0.48
CUEDC1-206ENST00000577830 SPENQ96T58 3664 aaKnown RBP12.08□□□□□ -0.48
CUEDC1-206ENST00000577830 TYMSP04818 313 aa12.08□□□□□ -0.48
CUEDC1-206ENST00000577830 FOXL1Q12952 345 aa12.08□□□□□ -0.48
CUEDC1-206ENST00000577830 VWC2Q2TAL6 325 aa12.08□□□□□ -0.48
CUEDC1-206ENST00000577830 C15orf61A6NNL5 157 aa12.08□□□□□ -0.48
CUEDC1-206ENST00000577830 DIRC3C9JPN6 131 aa12.08□□□□□ -0.48
CUEDC1-206ENST00000577830 PF4V1P10720 104 aa12.08□□□□□ -0.48
CUEDC1-206ENST00000577830 DLX1P56177 255 aa12.08□□□□□ -0.48
CUEDC1-206ENST00000577830 SELENOVP59797 346 aa12.08□□□□□ -0.48
CUEDC1-206ENST00000577830 TRAT1Q6PIZ9 186 aa12.08□□□□□ -0.48
CUEDC1-206ENST00000577830 COMMD5Q9GZQ3 224 aa12.08□□□□□ -0.48
CUEDC1-206ENST00000577830 TBL2Q9Y4P3 447 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms