RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 SMIM10L2AP0DMW4 78 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 SMIM10L2BP0DMW5 78 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 NFYAP23511 347 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 BTCP35070 178 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 HINT1P49773 126 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 PPP1CBP62140 327 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 LCN6P62502 163 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 CRADDP78560 199 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 PRDX4Q13162 271 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 PMAIP1Q13794 54 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 DIAPH2-AS1Q14236 149 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 ENDOGQ14249 297 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 LINC00483Q53H64 154 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 CASC10Q5T4H9 136 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF684Q5T5D7 378 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 AADACL3Q5VUY0 350 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 TRIM40Q6P9F5 258 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 CLEC20AQ6ZU45 233 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 H2AFVQ71UI9 128 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 CMC1Q7Z7K0 106 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 OOSP2Q86WS3 158 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 VKORC1L1Q8N0U8 176 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 GAPTQ8N292 157 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 DEFB125Q8N687 156 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 PRELID2Q8N945 189 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 ZDHHC22Q8N966 263 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 GPR26Q8NDV2 337 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 OR4K17Q8NGC6 315 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 IL1F10Q8WWZ1 152 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 SLC25A46Q96AG3 418 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 PLEKHB2Q96CS7 222 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 MUCL1Q96DR8 90 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 PGLYRP3Q96LB9 341 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 VAMP8Q9BV40 100 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 GGTLC1Q9BX51 225 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 TMEM59Q9BXS4 323 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 IFI27L2Q9H2X8 130 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 TVP23BQ9NYZ1 205 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 CLCF1Q9UBD9 225 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF835Q9Y2P0 537 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 KIF13AQ9H1H9 1805 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 ABCC2Q92887 1545 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 CFTRP13569 1480 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 NKTRP30414 1462 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 SIGLEC1Q9BZZ2 1709 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 DISP2A7MBM2 1401 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 MYH4Q9Y623 1939 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 FBN1P35555 2871 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 TRPM1Q7Z4N2 1603 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 ABCA9Q8IUA7 1624 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 ABCC6O95255 1503 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 TMEM235A6NFC5 223 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 CD300LBA8K4G0 201 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 LY6LH3BQJ8 138 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 J3QR89 54 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 K7EP34 96 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 PIRO00625 290 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 CRXO43186 299 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 REM1O75628 298 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 CXorf1O96002 111 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 IGKV1D-16P01601 117 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 TRGC2P03986 189 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 HLA-DQB2P05538 268 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 IGKV5-2P06315 115 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 CXCL1P09341 107 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 PGA4P0DJD7 388 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 PGA5P0DJD9 388 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 IGLC2P0DOY2 106 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 IGLC3P0DOY3 106 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 CD99P14209 185 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 TSPOP30536 169 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 GPM6AP51674 278 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 RBM11P57052 281 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 IHHQ14623 411 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 CCL15Q16663 113 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 TMEM183BQ1AE95 376 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 CEACAM16Q2WEN9 425 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 Q5W150 140 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 Q6AWC8 147 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 LAIR2Q6ISS4 152 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF695Q8IW36 515 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 DEFB107AQ8IZN7 70 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 NPWQ8N729 165 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 OR51T1Q8NGJ9 327 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 OR5D16Q8NGK9 328 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 MFSD8Q8NHS3 518 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 SLC25A40Q8TBP6 338 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 ADAT3Q96EY9 351 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 PEBP4Q96S96 227 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 FOXC2Q99958 501 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 RNF126Q9BV68 326 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 SRXN1Q9BYN0 137 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 ULBP3Q9BZM4 244 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 DPY30Q9C005 99 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 PARP11Q9NR21 331 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 RPRMQ9NS64 109 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 TMEM100Q9NV29 134 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 MTFP1Q9UDX5 166 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 POLR1DQ9Y2S0 133 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 BCORL1Q5H9F3 1711 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms