RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 TMEM68Q96MH6 324 aa13.03□□□□□ -0.32
ERCC4-208ENST00000576348 MFFQ9GZY8 342 aa13.03□□□□□ -0.32
ERCC4-208ENST00000576348 LYRM2Q9NU23 88 aaPredicted RBP13.03□□□□□ -0.32
ERCC4-208ENST00000576348 F8P00451 2351 aa13.02□□□□□ -0.32
ERCC4-208ENST00000576348 TRAV41A0A0B4J266 112 aa13.02□□□□□ -0.33
ERCC4-208ENST00000576348 A0A1B0GW64 132 aa13.02□□□□□ -0.33
ERCC4-208ENST00000576348 HMSDA8MTL9 139 aa13.02□□□□□ -0.33
ERCC4-208ENST00000576348 INS-IGF2F8WCM5 200 aa13.02□□□□□ -0.33
ERCC4-208ENST00000576348 G3V3Q6 166 aa13.02□□□□□ -0.33
ERCC4-208ENST00000576348 BOLA2-SMG1P6H3BVE0 249 aa13.02□□□□□ -0.33
ERCC4-208ENST00000576348 TMEM50AO95807 157 aa13.02□□□□□ -0.33
ERCC4-208ENST00000576348 AP2S1P53680 142 aaPredicted RBP13.02□□□□□ -0.33
ERCC4-208ENST00000576348 OR4C12Q96R67 309 aa13.02□□□□□ -0.33
ERCC4-208ENST00000576348 TNFSF18Q9UNG2 199 aa13.02□□□□□ -0.33
ERCC4-208ENST00000576348 LINC01548A6NM66 108 aa13.01□□□□□ -0.33
ERCC4-208ENST00000576348 SCAF4O95104 1147 aaKnown RBP13.01□□□□□ -0.33
ERCC4-208ENST00000576348 METTL15P1P0C7V9 234 aa13.01□□□□□ -0.33
ERCC4-208ENST00000576348 PAX9P55771 341 aa13.01□□□□□ -0.33
ERCC4-208ENST00000576348 RPL15P61313 204 aaKnown RBP13.01□□□□□ -0.33
ERCC4-208ENST00000576348 OR8G2PQ6IF36 304 aa13.01□□□□□ -0.33
ERCC4-208ENST00000576348 ACOT7LQ6ZUV0 252 aa13.01□□□□□ -0.33
ERCC4-208ENST00000576348 OR5T1Q8NG75 326 aa13.01□□□□□ -0.33
ERCC4-208ENST00000576348 OR11H4Q8NGC9 324 aa13.01□□□□□ -0.33
ERCC4-208ENST00000576348 OR1L6Q8NGR2 347 aa13.01□□□□□ -0.33
ERCC4-208ENST00000576348 OR2T6Q8NHC8 308 aa13.01□□□□□ -0.33
ERCC4-208ENST00000576348 C11orf1Q9H5F2 150 aa13.01□□□□□ -0.33
ERCC4-208ENST00000576348 ZNF355PQ9NSJ1 428 aa13.01□□□□□ -0.33
ERCC4-208ENST00000576348 FBXO7Q9Y3I1 522 aa13.01□□□□□ -0.33
ERCC4-208ENST00000576348 MTORP42345 2549 aa13.01□□□□□ -0.33
ERCC4-208ENST00000576348 IGSF23A1L1A6 192 aa13□□□□□ -0.33
ERCC4-208ENST00000576348 NPIPB5A8MRT5 1133 aa13□□□□□ -0.33
ERCC4-208ENST00000576348 CST7O76096 145 aa13□□□□□ -0.33
ERCC4-208ENST00000576348 SULT1A1P50225 295 aa13□□□□□ -0.33
ERCC4-208ENST00000576348 HBG1P69891 147 aa13□□□□□ -0.33
ERCC4-208ENST00000576348 HBG2P69892 147 aa13□□□□□ -0.33
ERCC4-208ENST00000576348 EWSR1Q01844 656 aaKnown RBP eCLIP13□□□□□ -0.33
ERCC4-208ENST00000576348 BAXQ07812 192 aa13□□□□□ -0.33
ERCC4-208ENST00000576348 C2orf83Q53S99 150 aa13□□□□□ -0.33
ERCC4-208ENST00000576348 SLC25A24Q6NUK1 477 aa13□□□□□ -0.33
ERCC4-208ENST00000576348 ETV3LQ6ZN32 361 aa13□□□□□ -0.33
ERCC4-208ENST00000576348 TMEM252Q8N6L7 170 aa13□□□□□ -0.33
ERCC4-208ENST00000576348 GON7Q9BXV9 100 aa13□□□□□ -0.33
ERCC4-208ENST00000576348 ZNF702PQ9H963 129 aa13□□□□□ -0.33
ERCC4-208ENST00000576348 LINC00527Q9UJ94 153 aa13□□□□□ -0.33
ERCC4-208ENST00000576348 TSPAN9O75954 239 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 IGF1P05019 195 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 RNASE2P10153 161 aaKnown RBP12.99□□□□□ -0.33
ERCC4-208ENST00000576348 EGR2P11161 476 aaPredicted RBP12.99□□□□□ -0.33
ERCC4-208ENST00000576348 C4BPBP20851 252 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 NKX2-5P52952 324 aaPredicted RBP12.99□□□□□ -0.33
ERCC4-208ENST00000576348 OR2F1Q13607 317 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 AKIRIN2Q53H80 203 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 TMEM14EPQ6UXP3 125 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 Q6ZS46 218 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 LILRB2Q8N423 598 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 TTC9CQ8N5M4 171 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 TMEM217Q8N7C4 229 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 OR10P1Q8NGE3 313 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 OR1P1Q8NH06 330 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 FAM110DQ8TAY7 271 aaPredicted RBP12.99□□□□□ -0.33
ERCC4-208ENST00000576348 MISP3Q96FF7 219 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 AQP10Q96PS8 301 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 P2RX4Q99571 388 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 WNT10AQ9GZT5 417 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 HSPB11Q9Y547 144 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 F11RQ9Y624 299 aaKnown RBP12.99□□□□□ -0.33
ERCC4-208ENST00000576348 MAST4O15021 2626 aa12.99□□□□□ -0.33
ERCC4-208ENST00000576348 A0A0D9SG52 128 aa12.98□□□□□ -0.33
ERCC4-208ENST00000576348 C15orf62A8K5M9 175 aa12.98□□□□□ -0.33
ERCC4-208ENST00000576348 G3V318 75 aa12.98□□□□□ -0.33
ERCC4-208ENST00000576348 FBXO24O75426 580 aa12.98□□□□□ -0.33
ERCC4-208ENST00000576348 HKR1P10072 659 aa12.98□□□□□ -0.33
ERCC4-208ENST00000576348 CTRB1P17538 263 aa12.98□□□□□ -0.33
ERCC4-208ENST00000576348 CRIP2P52943 208 aaPredicted RBP12.98□□□□□ -0.33
ERCC4-208ENST00000576348 SLC35B1P78383 322 aa12.98□□□□□ -0.33
ERCC4-208ENST00000576348 TMEM95Q3KNT9 176 aa12.98□□□□□ -0.33
ERCC4-208ENST00000576348 CTRB2Q6GPI1 263 aa12.98□□□□□ -0.33
ERCC4-208ENST00000576348 STPG2Q8N412 459 aa12.98□□□□□ -0.33
ERCC4-208ENST00000576348 ZNF114Q8NC26 417 aa12.98□□□□□ -0.33
ERCC4-208ENST00000576348 OR1S2Q8NGQ3 325 aa12.98□□□□□ -0.33
ERCC4-208ENST00000576348 PINX1Q96BK5 328 aaKnown RBP12.98□□□□□ -0.33
ERCC4-208ENST00000576348 NOL4LQ96MY1 436 aaPredicted RBP12.98□□□□□ -0.33
ERCC4-208ENST00000576348 MXRA5Q9NR99 2828 aa12.97□□□□□ -0.33
ERCC4-208ENST00000576348 CORTO00230 105 aa12.97□□□□□ -0.33
ERCC4-208ENST00000576348 HIST1H1BP16401 226 aaKnown RBP12.97□□□□□ -0.33
ERCC4-208ENST00000576348 SLC38A11Q08AI6 406 aa12.97□□□□□ -0.33
ERCC4-208ENST00000576348 ASPHD1Q5U4P2 390 aa12.97□□□□□ -0.33
ERCC4-208ENST00000576348 C19orf35Q6ZS72 473 aa12.97□□□□□ -0.33
ERCC4-208ENST00000576348 RNASEH2CQ8TDP1 164 aaKnown RBP12.97□□□□□ -0.33
ERCC4-208ENST00000576348 SMIM3Q9BZL3 60 aa12.97□□□□□ -0.33
ERCC4-208ENST00000576348 THYN1Q9P016 225 aa12.97□□□□□ -0.33
ERCC4-208ENST00000576348 RPS10-NUDT3A0A1W2PQS6 291 aa12.96□□□□□ -0.33
ERCC4-208ENST00000576348 KANTRA0A1W2PQU2 76 aa12.96□□□□□ -0.33
ERCC4-208ENST00000576348 SMCO3A2RU48 225 aa12.96□□□□□ -0.33
ERCC4-208ENST00000576348 RNF222A6NCQ9 220 aa12.96□□□□□ -0.33
ERCC4-208ENST00000576348 CRYGCP07315 174 aa12.96□□□□□ -0.33
ERCC4-208ENST00000576348 S100A11P31949 105 aa12.96□□□□□ -0.33
ERCC4-208ENST00000576348 OPRK1P41145 380 aa12.96□□□□□ -0.33
ERCC4-208ENST00000576348 NHLH2Q02577 135 aa12.96□□□□□ -0.33
ERCC4-208ENST00000576348 ZNF345Q14585 488 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms