RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 F11RQ9Y624 299 aaKnown RBP11.66□□□□□ -0.54
CTDNEP1-211ENST00000575783 TEX50A0A1B0GTY4 177 aa11.65□□□□□ -0.54
CTDNEP1-211ENST00000575783 SULT1C2O00338 296 aa11.65□□□□□ -0.54
CTDNEP1-211ENST00000575783 APOHP02749 345 aaPredicted RBP11.65□□□□□ -0.54
CTDNEP1-211ENST00000575783 CD5P06127 495 aa11.65□□□□□ -0.54
CTDNEP1-211ENST00000575783 TMEM91Q6ZNR0 172 aa11.65□□□□□ -0.54
CTDNEP1-211ENST00000575783 DUSP18Q8NEJ0 188 aa11.65□□□□□ -0.54
CTDNEP1-211ENST00000575783 DMBX1Q8NFW5 382 aa11.65□□□□□ -0.54
CTDNEP1-211ENST00000575783 MND1Q9BWT6 205 aa11.65□□□□□ -0.54
CTDNEP1-211ENST00000575783 TMEM140Q9NV12 185 aa11.65□□□□□ -0.54
CTDNEP1-211ENST00000575783 V9GY05 133 aa11.65□□□□□ -0.54
CTDNEP1-211ENST00000575783 ERICH4A6NGS2 130 aa11.64□□□□□ -0.55
CTDNEP1-211ENST00000575783 ARL6IP5O75915 188 aa11.64□□□□□ -0.55
CTDNEP1-211ENST00000575783 NQO2P16083 231 aa11.64□□□□□ -0.55
CTDNEP1-211ENST00000575783 DTYMKP23919 212 aa11.64□□□□□ -0.55
CTDNEP1-211ENST00000575783 CALRP27797 417 aaKnown RBP11.64□□□□□ -0.55
CTDNEP1-211ENST00000575783 RANBP1P43487 201 aa11.64□□□□□ -0.55
CTDNEP1-211ENST00000575783 TAS2R31P59538 309 aa11.64□□□□□ -0.55
CTDNEP1-211ENST00000575783 UBE2UQ5VVX9 321 aa11.64□□□□□ -0.55
CTDNEP1-211ENST00000575783 LAIR2Q6ISS4 152 aa11.64□□□□□ -0.55
CTDNEP1-211ENST00000575783 HSD17B13Q7Z5P4 300 aaPredicted RBP11.64□□□□□ -0.55
CTDNEP1-211ENST00000575783 PQLC1Q8N2U9 271 aa11.64□□□□□ -0.55
CTDNEP1-211ENST00000575783 CSNK1G2-AS1Q8NCQ2 148 aa11.64□□□□□ -0.55
CTDNEP1-211ENST00000575783 CCL28Q9NRJ3 127 aa11.64□□□□□ -0.55
CTDNEP1-211ENST00000575783 HPRT1P00492 218 aa11.63□□□□□ -0.55
CTDNEP1-211ENST00000575783 SPHARQ15513 63 aa11.63□□□□□ -0.55
CTDNEP1-211ENST00000575783 RNF212Q495C1 297 aa11.63□□□□□ -0.55
CTDNEP1-211ENST00000575783 ACTL10Q5JWF8 245 aa11.63□□□□□ -0.55
CTDNEP1-211ENST00000575783 THOC7Q6I9Y2 204 aaKnown RBP11.63□□□□□ -0.55
CTDNEP1-211ENST00000575783 OR1L8Q8NGR8 309 aa11.63□□□□□ -0.55
CTDNEP1-211ENST00000575783 SECTM1Q8WVN6 248 aa11.63□□□□□ -0.55
CTDNEP1-211ENST00000575783 SLC25A46Q96AG3 418 aa11.63□□□□□ -0.55
CTDNEP1-211ENST00000575783 TRAV2A0A0B4J234 112 aa11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 METTL21EPA6NDL7 271 aa11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 IGHV3-48P01763 117 aa11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 EMP1P54849 157 aa11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 RPS25P62851 125 aaKnown RBP11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 CDNFQ49AH0 187 aa11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 CNIH2Q6PI25 160 aa11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 ZNF773Q6PK81 442 aa11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 UFD1Q92890 307 aa11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 LSM10Q969L4 123 aaKnown RBP11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 GINS3Q9BRX5 216 aa11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 NXF2Q9GZY0 626 aaKnown RBP11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 DCSTAMPQ9H295 470 aa11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 VSIRQ9H7M9 311 aa11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 S100A14Q9HCY8 104 aa11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 NDUFA4L2Q9NRX3 87 aa11.62□□□□□ -0.55
CTDNEP1-211ENST00000575783 RBFOX2O43251 390 aaKnown RBP eCLIP11.61□□□□□ -0.55
CTDNEP1-211ENST00000575783 ZNF688P0C7X2 276 aa11.61□□□□□ -0.55
CTDNEP1-211ENST00000575783 MFAP4P55083 255 aa11.61□□□□□ -0.55
CTDNEP1-211ENST00000575783 POU2AF1Q16633 256 aa11.61□□□□□ -0.55
CTDNEP1-211ENST00000575783 TOMM20LQ6UXN7 152 aa11.61□□□□□ -0.55
CTDNEP1-211ENST00000575783 C10orf67Q8IYJ2 551 aa11.61□□□□□ -0.55
CTDNEP1-211ENST00000575783 DHRSXQ8N5I4 330 aa11.61□□□□□ -0.55
CTDNEP1-211ENST00000575783 STXBP6Q8NFX7 210 aa11.61□□□□□ -0.55
CTDNEP1-211ENST00000575783 MISP3Q96FF7 219 aa11.61□□□□□ -0.55
CTDNEP1-211ENST00000575783 ATG5Q9H1Y0 275 aa11.61□□□□□ -0.55
CTDNEP1-211ENST00000575783 PLCXD1Q9NUJ7 323 aa11.61□□□□□ -0.55
CTDNEP1-211ENST00000575783 GNAO1P09471 354 aa11.6□□□□□ -0.55
CTDNEP1-211ENST00000575783 SPART-AS1P0CW21 52 aa11.6□□□□□ -0.55
CTDNEP1-211ENST00000575783 HTN3P15516 51 aa11.6□□□□□ -0.55
CTDNEP1-211ENST00000575783 RCN1Q15293 331 aa11.6□□□□□ -0.55
CTDNEP1-211ENST00000575783 ZNF367Q7RTV3 350 aa11.6□□□□□ -0.55
CTDNEP1-211ENST00000575783 NUDCD2Q8WVJ2 157 aa11.6□□□□□ -0.55
CTDNEP1-211ENST00000575783 FAM210BQ96KR6 192 aa11.6□□□□□ -0.55
CTDNEP1-211ENST00000575783 FKBP14Q9NWM8 211 aa11.6□□□□□ -0.55
CTDNEP1-211ENST00000575783 NSG2Q9Y328 171 aa11.6□□□□□ -0.55
CTDNEP1-211ENST00000575783 LSM2Q9Y333 95 aaKnown RBP11.6□□□□□ -0.55
CTDNEP1-211ENST00000575783 OR51B2Q9Y5P1 312 aa11.6□□□□□ -0.55
CTDNEP1-211ENST00000575783 PTGES3LE9PB15 166 aa11.59□□□□□ -0.55
CTDNEP1-211ENST00000575783 GNG7O60262 68 aa11.59□□□□□ -0.55
CTDNEP1-211ENST00000575783 FGF2P09038 288 aa11.59□□□□□ -0.55
CTDNEP1-211ENST00000575783 HSMCR30P0CW71 290 aa11.59□□□□□ -0.55
CTDNEP1-211ENST00000575783 RAB6AP20340 208 aa11.59□□□□□ -0.55
CTDNEP1-211ENST00000575783 CATR1Q13166 79 aa11.59□□□□□ -0.55
CTDNEP1-211ENST00000575783 HACD4Q5VWC8 232 aa11.59□□□□□ -0.55
CTDNEP1-211ENST00000575783 C8orf59Q8N0T1 100 aaPredicted RBP11.59□□□□□ -0.55
CTDNEP1-211ENST00000575783 OR51H1Q8NH63 302 aa11.59□□□□□ -0.55
CTDNEP1-211ENST00000575783 TXN2Q99757 166 aa11.59□□□□□ -0.55
CTDNEP1-211ENST00000575783 XCL2Q9UBD3 114 aa11.59□□□□□ -0.55
CTDNEP1-211ENST00000575783 ANXA10Q9UJ72 324 aa11.59□□□□□ -0.55
CTDNEP1-211ENST00000575783 I3L2K1 104 aa11.58□□□□□ -0.56
CTDNEP1-211ENST00000575783 K7EQG2 157 aa11.58□□□□□ -0.56
CTDNEP1-211ENST00000575783 PTHLHP12272 177 aa11.58□□□□□ -0.56
CTDNEP1-211ENST00000575783 FCGR2CP31995 323 aa11.58□□□□□ -0.56
CTDNEP1-211ENST00000575783 OR10A3P58181 314 aa11.58□□□□□ -0.56
CTDNEP1-211ENST00000575783 ERVK-16P61578 105 aa11.58□□□□□ -0.56
CTDNEP1-211ENST00000575783 ARL6IP1Q15041 203 aa11.58□□□□□ -0.56
CTDNEP1-211ENST00000575783 SPATA12Q7Z6I5 190 aa11.58□□□□□ -0.56
CTDNEP1-211ENST00000575783 OR13F1Q8NGS4 319 aa11.58□□□□□ -0.56
CTDNEP1-211ENST00000575783 RNF167Q9H6Y7 350 aa11.58□□□□□ -0.56
CTDNEP1-211ENST00000575783 PLEKHA2Q9HB19 425 aa11.58□□□□□ -0.56
CTDNEP1-211ENST00000575783 TMED3Q9Y3Q3 217 aa11.58□□□□□ -0.56
CTDNEP1-211ENST00000575783 EPM2AB3EWF7 344 aa11.57□□□□□ -0.56
CTDNEP1-211ENST00000575783 MT-CO2P00403 227 aa11.57□□□□□ -0.56
CTDNEP1-211ENST00000575783 INAFM2P0DMQ5 153 aa11.57□□□□□ -0.56
CTDNEP1-211ENST00000575783 FABP5Q01469 135 aa11.57□□□□□ -0.56
CTDNEP1-211ENST00000575783 C6orf223Q8N319 242 aa11.57□□□□□ -0.56
CTDNEP1-211ENST00000575783 ZBTB34Q8NCN2 500 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms