RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 LYG2Q86SG7 212 aa11.28□□□□□ -0.6
CTNS-209ENST00000574776 CROCCP3Q8IVE0 287 aa11.28□□□□□ -0.6
CTNS-209ENST00000574776 SAMD12Q8N8I0 201 aa11.28□□□□□ -0.6
CTNS-209ENST00000574776 ANAPC10Q9UM13 185 aa11.28□□□□□ -0.6
CTNS-209ENST00000574776 TP53TG1Q9Y2A0 90 aa11.28□□□□□ -0.6
CTNS-209ENST00000574776 DBX1A6NMT0 343 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 K7EMT4 169 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 GPR31O00270 319 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 CTSDP07339 412 aaPredicted RBP11.27□□□□□ -0.61
CTNS-209ENST00000574776 CTSGP08311 255 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 HLA-DMAP28067 261 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 PRSS3P35030 304 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 TAS2R46P59540 309 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 LSM3P62310 102 aaKnown RBP11.27□□□□□ -0.61
CTNS-209ENST00000574776 TNFRSF9Q07011 255 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 PHLDA2Q53GA4 152 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 CADM3Q8N126 398 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 STPG3Q8N7X2 389 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 LINC00476Q8WZB0 136 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 TMEM56Q96MV1 263 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 ATP6V0BQ99437 205 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 FXYD6Q9H0Q3 95 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 FKBP11Q9NYL4 201 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 SMPXQ9UHP9 88 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 PRNDQ9UKY0 176 aa11.27□□□□□ -0.61
CTNS-209ENST00000574776 OR4C46A6NHA9 309 aa11.26□□□□□ -0.61
CTNS-209ENST00000574776 HRH1P35367 487 aa11.26□□□□□ -0.61
CTNS-209ENST00000574776 KCTD21Q4G0X4 260 aa11.26□□□□□ -0.61
CTNS-209ENST00000574776 OR5B3Q8NH48 314 aa11.26□□□□□ -0.61
CTNS-209ENST00000574776 RNF183Q96D59 192 aa11.26□□□□□ -0.61
CTNS-209ENST00000574776 IGHV3-49A0A0A0MS15 119 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 KIR2DL5BA0A0G2JN68 375 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 KIR2DL5BA0A0G2JPC4 375 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 C15orf62A8K5M9 175 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 YIF1AO95070 293 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 CEMP1Q6PRD7 247 aaPredicted RBP11.25□□□□□ -0.61
CTNS-209ENST00000574776 APRG1Q8IVJ8 170 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 KIR2DL5AQ8N109 375 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 OR1P1Q8NH06 330 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 KIR2DL5BQ8NHK3 375 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 SLC25A46Q96AG3 418 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 MISP3Q96FF7 219 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 ZNF414Q96IQ9 312 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 RNF2Q99496 336 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 RHPN1-AS1Q9BWJ2 59 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 TMEM14BQ9NUH8 114 aa11.25□□□□□ -0.61
CTNS-209ENST00000574776 IGHV7-4-1A0A0J9YVY3 117 aa11.24□□□□□ -0.61
CTNS-209ENST00000574776 NUPR2A6NF83 97 aa11.24□□□□□ -0.61
CTNS-209ENST00000574776 C15orf61A6NNL5 157 aa11.24□□□□□ -0.61
CTNS-209ENST00000574776 CHEK1O14757 476 aa11.24□□□□□ -0.61
CTNS-209ENST00000574776 NUPL2O15504 423 aaKnown RBP11.24□□□□□ -0.61
CTNS-209ENST00000574776 IGHV3-48P01763 117 aa11.24□□□□□ -0.61
CTNS-209ENST00000574776 TFPI2P48307 235 aa11.24□□□□□ -0.61
CTNS-209ENST00000574776 MFAP4P55083 255 aa11.24□□□□□ -0.61
CTNS-209ENST00000574776 TSPAN5P62079 268 aa11.24□□□□□ -0.61
CTNS-209ENST00000574776 LPCAT3Q6P1A2 487 aa11.24□□□□□ -0.61
CTNS-209ENST00000574776 TBC1D26Q86UD7 250 aa11.24□□□□□ -0.61
CTNS-209ENST00000574776 YIPF6Q96EC8 236 aa11.24□□□□□ -0.61
CTNS-209ENST00000574776 GALNT14Q96FL9 552 aa11.24□□□□□ -0.61
CTNS-209ENST00000574776 TSC22D3Q99576 134 aa11.24□□□□□ -0.61
CTNS-209ENST00000574776 MAP6D1Q9H9H5 199 aa11.24□□□□□ -0.61
CTNS-209ENST00000574776 IGKV3-7A0A075B6H7 116 aa11.23□□□□□ -0.61
CTNS-209ENST00000574776 I3L2K1 104 aa11.23□□□□□ -0.61
CTNS-209ENST00000574776 EIF4EP06730 217 aaKnown RBP11.23□□□□□ -0.61
CTNS-209ENST00000574776 FCGR2BP31994 310 aaPredicted RBP11.23□□□□□ -0.61
CTNS-209ENST00000574776 RELQ04864 619 aaPredicted RBP11.23□□□□□ -0.61
CTNS-209ENST00000574776 ZNF124Q15973 351 aa11.23□□□□□ -0.61
CTNS-209ENST00000574776 H2BFWTQ7Z2G1 175 aa11.23□□□□□ -0.61
CTNS-209ENST00000574776 TMEM116Q8NCL8 245 aa11.23□□□□□ -0.61
CTNS-209ENST00000574776 OR4A16Q8NH70 328 aa11.23□□□□□ -0.61
CTNS-209ENST00000574776 GPX8Q8TED1 209 aa11.23□□□□□ -0.61
CTNS-209ENST00000574776 SEC22AQ96IW7 307 aa11.23□□□□□ -0.61
CTNS-209ENST00000574776 IGHV3OR16-13A0A075B7E8 117 aa11.22□□□□□ -0.61
CTNS-209ENST00000574776 IGHV3-74A0A0B4J1X5 117 aa11.22□□□□□ -0.61
CTNS-209ENST00000574776 SMIM31A0A1B0GVY4 71 aa11.22□□□□□ -0.61
CTNS-209ENST00000574776 MT-CO2P00403 227 aa11.22□□□□□ -0.61
CTNS-209ENST00000574776 IGKV1-39P01597 117 aa11.22□□□□□ -0.61
CTNS-209ENST00000574776 IGKV1D-39P04432 117 aa11.22□□□□□ -0.61
CTNS-209ENST00000574776 S100GP29377 79 aa11.22□□□□□ -0.61
CTNS-209ENST00000574776 SNX29P2Q8IUI4 249 aa11.22□□□□□ -0.61
CTNS-209ENST00000574776 GBGT1Q8N5D6 347 aa11.22□□□□□ -0.61
CTNS-209ENST00000574776 OR10C1Q96KK4 312 aa11.22□□□□□ -0.61
CTNS-209ENST00000574776 TXN2Q99757 166 aa11.22□□□□□ -0.61
CTNS-209ENST00000574776 NXF2Q9GZY0 626 aaKnown RBP11.22□□□□□ -0.61
CTNS-209ENST00000574776 FAM212BQ9NTI7 297 aaPredicted RBP11.22□□□□□ -0.61
CTNS-209ENST00000574776 COMMD3Q9UBI1 195 aa11.22□□□□□ -0.61
CTNS-209ENST00000574776 KLK5Q9Y337 293 aaPredicted RBP11.22□□□□□ -0.61
CTNS-209ENST00000574776 TRAV14DV4A0A0A6YYC5 116 aa11.21□□□□□ -0.61
CTNS-209ENST00000574776 ATF4P18848 351 aaPredicted RBP11.21□□□□□ -0.61
CTNS-209ENST00000574776 CMC4P56277 68 aaPredicted RBP11.21□□□□□ -0.61
CTNS-209ENST00000574776 TMEM217Q8N7C4 229 aa11.21□□□□□ -0.61
CTNS-209ENST00000574776 PINX1Q96BK5 328 aaKnown RBP11.21□□□□□ -0.61
CTNS-209ENST00000574776 C6orf62Q9GZU0 229 aaPredicted RBP11.21□□□□□ -0.61
CTNS-209ENST00000574776 CSTL1Q9H114 145 aa11.21□□□□□ -0.61
CTNS-209ENST00000574776 MPTX1A8MV57 137 aa11.2□□□□□ -0.62
CTNS-209ENST00000574776 GNG7O60262 68 aa11.2□□□□□ -0.62
CTNS-209ENST00000574776 UCP3P55916 312 aa11.2□□□□□ -0.62
CTNS-209ENST00000574776 HSPE1P61604 102 aaKnown RBP11.2□□□□□ -0.62
CTNS-209ENST00000574776 ERHP84090 104 aaKnown RBP11.2□□□□□ -0.62
CTNS-209ENST00000574776 PRCDQ00LT1 54 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms