RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 ACSM6Q6P461 480 aa7.51□□□□□ -1.21
NDE1-210ENST00000574163 SGPP2Q8IWX5 399 aa7.51□□□□□ -1.21
NDE1-210ENST00000574163 ZNF114Q8NC26 417 aa7.51□□□□□ -1.21
NDE1-210ENST00000574163 EEF1AKMT3Q96AZ1 226 aa7.51□□□□□ -1.21
NDE1-210ENST00000574163 RRNAD1Q96FB5 475 aaKnown RBP7.51□□□□□ -1.21
NDE1-210ENST00000574163 CXorf58Q96LI9 332 aa7.51□□□□□ -1.21
NDE1-210ENST00000574163 ATP6V0BQ99437 205 aa7.51□□□□□ -1.21
NDE1-210ENST00000574163 SLC25A21Q9BQT8 299 aaPredicted RBP7.51□□□□□ -1.21
NDE1-210ENST00000574163 CACFD1Q9UGQ2 172 aa7.51□□□□□ -1.21
NDE1-210ENST00000574163 NSG2Q9Y328 171 aa7.51□□□□□ -1.21
NDE1-210ENST00000574163 F11RQ9Y624 299 aaKnown RBP7.51□□□□□ -1.21
NDE1-210ENST00000574163 TRBV7-1A0A0A6YYK4 115 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 ANKRD34BA5PLL1 514 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 NAP1L6A6NFF2 107 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 DBX1A6NMT0 343 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 BMPR1BO00238 502 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 TRBV12-3P01733 135 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 REG1AP05451 166 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 OR13C7P0DN81 318 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 HSPE1P61604 102 aaKnown RBP7.5□□□□□ -1.21
NDE1-210ENST00000574163 RBMS2Q15434 407 aaKnown RBP7.5□□□□□ -1.21
NDE1-210ENST00000574163 RPEL1Q2QD12 228 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 SP6Q3SY56 376 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 C19orf35Q6ZS72 473 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 OR10W1Q8NGF6 305 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 OR1P1Q8NH06 330 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 RNASE11Q8TAA1 199 aaKnown RBP7.5□□□□□ -1.21
NDE1-210ENST00000574163 VN1R17PQ8TDU5 208 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 GLYATL2Q8WU03 294 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 TMEM230Q96A57 120 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 CCDC140Q96MF4 163 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 C7orf50Q9BRJ6 194 aaKnown RBP7.5□□□□□ -1.21
NDE1-210ENST00000574163 ELOVL1Q9BW60 279 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 HINT2Q9BX68 163 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 KCNIP3Q9Y2W7 256 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 TMEM56-RWDD3S4R434 201 aa7.5□□□□□ -1.21
NDE1-210ENST00000574163 GGCTO75223 188 aaKnown RBP7.49□□□□□ -1.21
NDE1-210ENST00000574163 NDUFB8O95169 186 aa7.49□□□□□ -1.21
NDE1-210ENST00000574163 ANXA3P12429 323 aa7.49□□□□□ -1.21
NDE1-210ENST00000574163 INPP1P49441 399 aa7.49□□□□□ -1.21
NDE1-210ENST00000574163 MECP2P51608 486 aaKnown RBP7.49□□□□□ -1.21
NDE1-210ENST00000574163 KRTAP10-11P60412 298 aa7.49□□□□□ -1.21
NDE1-210ENST00000574163 UBE2MP61081 183 aaKnown RBP7.49□□□□□ -1.21
NDE1-210ENST00000574163 TMEM187Q14656 261 aa7.49□□□□□ -1.21
NDE1-210ENST00000574163 TATDN3Q17R31 274 aa7.49□□□□□ -1.21
NDE1-210ENST00000574163 ZNF57Q68EA5 555 aaPredicted RBP7.49□□□□□ -1.21
NDE1-210ENST00000574163 OR2C3Q8N628 320 aa7.49□□□□□ -1.21
NDE1-210ENST00000574163 SLC35G3Q8N808 338 aa7.49□□□□□ -1.21
NDE1-210ENST00000574163 OR9G4Q8NGQ1 327 aa7.49□□□□□ -1.21
NDE1-210ENST00000574163 LHFPL5Q8TAF8 219 aa7.49□□□□□ -1.21
NDE1-210ENST00000574163 ZNF502Q8TBZ5 544 aa7.49□□□□□ -1.21
NDE1-210ENST00000574163 SDHCQ99643 169 aaPredicted RBP7.49□□□□□ -1.21
NDE1-210ENST00000574163 PLEKHA3Q9HB20 300 aa7.49□□□□□ -1.21
NDE1-210ENST00000574163 SIGLEC8Q9NYZ4 499 aa7.49□□□□□ -1.21
NDE1-210ENST00000574163 DMRT1Q9Y5R6 373 aa7.49□□□□□ -1.21
NDE1-210ENST00000574163 A0A0B4J293 547 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 A0A0B4J2A0 478 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 A0A0G2JRQ6 117 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 DUXBA0A1W2PPF3 345 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 MFSD2BA6NFX1 497 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 ST8SIA3O43173 380 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 SAP30O75446 220 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 PRB2P02812 416 aaPredicted RBP7.48□□□□□ -1.21
NDE1-210ENST00000574163 IL7P13232 177 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 SYNJ2BPP57105 145 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 SUPT4H1P63272 117 aaKnown RBP7.48□□□□□ -1.21
NDE1-210ENST00000574163 BAK1Q16611 211 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 IZUMO4Q1ZYL8 232 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 TMEM128Q5BJH2 165 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 TMEM268Q5VZI3 342 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 SELENOHQ8IZQ5 122 aaKnown RBP7.48□□□□□ -1.21
NDE1-210ENST00000574163 OR52E5Q8NH55 327 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 MRAPQ8TCY5 172 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 OR4C12Q96R67 309 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 PDCD10Q9BUL8 212 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 CCDC32Q9BV29 185 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 PEMTQ9UBM1 199 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 SHPKQ9UHJ6 478 aa7.48□□□□□ -1.21
NDE1-210ENST00000574163 CENPXA8MT69 81 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 A8MWP6 167 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 K7EIL1 84 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 LGALS9O00182 355 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 NDUFB6O95139 128 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 AKR1C4P17516 323 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 ARL3P36405 182 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 MFAP2P55001 183 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 SPCS3P61009 180 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 ERHP84090 104 aaKnown RBP7.47□□□□□ -1.21
NDE1-210ENST00000574163 CNPY1Q3B7I2 92 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 NMSQ5H8A3 153 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 SPSB3Q6PJ21 355 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 LGI3Q8N145 548 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 CENPSQ8N2Z9 138 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 LRTM2Q8N967 370 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 BSCL2Q96G97 398 aaPredicted RBP7.47□□□□□ -1.21
NDE1-210ENST00000574163 BATF3Q9NR55 127 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.47□□□□□ -1.21
NDE1-210ENST00000574163 GAR1Q9NY12 217 aaKnown RBP7.47□□□□□ -1.21
NDE1-210ENST00000574163 PTTG2Q9NZH5 202 aa7.47□□□□□ -1.21
NDE1-210ENST00000574163 CACNG5Q9UF02 275 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 1038.9 ms