RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	QTRT1	Q9BXR0	403 aa	Known RBP	11.24	□□□□□ -0.61
ABR-223	ENST00000573895	IGHV7-81	A0A0B4J1V7	117 aa		11.23	□□□□□ -0.61
ABR-223	ENST00000573895	WRB	O00258	174 aa		11.23	□□□□□ -0.61
ABR-223	ENST00000573895	SYNGR2	O43760	224 aa		11.23	□□□□□ -0.61
ABR-223	ENST00000573895	MPC2	O95563	127 aa		11.23	□□□□□ -0.61
ABR-223	ENST00000573895	PVALB	P20472	110 aa	Predicted RBP	11.23	□□□□□ -0.61
ABR-223	ENST00000573895	PPIF	P30405	207 aa	Known RBP	11.23	□□□□□ -0.61
ABR-223	ENST00000573895	CDX1	P47902	265 aa	Predicted RBP	11.23	□□□□□ -0.61
ABR-223	ENST00000573895	RAB32	Q13637	225 aa		11.23	□□□□□ -0.61
ABR-223	ENST00000573895	REC114	Q7Z4M0	266 aa		11.23	□□□□□ -0.61
ABR-223	ENST00000573895	THAP6	Q8TBB0	222 aa		11.23	□□□□□ -0.61
ABR-223	ENST00000573895	RCC1L	Q96I51	464 aa	Known RBP	11.23	□□□□□ -0.61
ABR-223	ENST00000573895	CIB3	Q96Q77	187 aa	Predicted RBP	11.23	□□□□□ -0.61
ABR-223	ENST00000573895	RAB40C	Q96S21	281 aa		11.23	□□□□□ -0.61
ABR-223	ENST00000573895	CLCC1	Q96S66	551 aa		11.23	□□□□□ -0.61
ABR-223	ENST00000573895	SRSF8	Q9BRL6	282 aa	Known RBP	11.23	□□□□□ -0.61
ABR-223	ENST00000573895	TNC	P24821	2201 aa		11.23	□□□□□ -0.61
ABR-223	ENST00000573895		K7EPK0	472 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	FCN1	O00602	326 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	CNIH1	O95406	144 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	SCGB1D2	O95969	90 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	SLC25A4	P12235	298 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	PSMB8	P28062	276 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	MYCNOS	P40205	109 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	CRIP2	P52943	208 aa	Predicted RBP	11.22	□□□□□ -0.61
ABR-223	ENST00000573895	TAS2R30	P59541	319 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	OR2B8P	P59922	312 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	PRCD	Q00LT1	54 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	PJVK	Q0ZLH3	352 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	TNXA	Q16473	311 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	OXLD1	Q5BKU9	147 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.22	□□□□□ -0.61
ABR-223	ENST00000573895	WDR89	Q96FK6	387 aa	Predicted RBP	11.22	□□□□□ -0.61
ABR-223	ENST00000573895	SMIM8	Q96KF7	97 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	RBKS	Q9H477	322 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	ENY2	Q9NPA8	101 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	TPSG1	Q9NRR2	321 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895	NDUFA4L2	Q9NRX3	87 aa		11.22	□□□□□ -0.61
ABR-223	ENST00000573895		A0A1W2PN81	502 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	CEBPZOS	A8MTT3	80 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895		E5RGE8	158 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	INS-IGF2	F8WCM5	200 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895		L7N2F9	121 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	DEDD	O75618	318 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	IGLV1-40	P01703	118 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	C1QB	P02746	253 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	RPLP1	P05386	114 aa	Known RBP	11.21	□□□□□ -0.61
ABR-223	ENST00000573895	LYL1	P12980	280 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	CHRNA7	P36544	502 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	RPL27A	P46776	148 aa	Known RBP	11.21	□□□□□ -0.61
ABR-223	ENST00000573895	ATP5I	P56385	69 aa	Predicted RBP	11.21	□□□□□ -0.61
ABR-223	ENST00000573895	S100A10	P60903	97 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	POLR2G	P62487	172 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
ABR-223	ENST00000573895	VAMP2	P63027	116 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	CX3CL1	P78423	397 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	FXYD3	Q14802	87 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	C11orf87	Q6NUJ2	197 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	PRSS54	Q6PEW0	395 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	TMEM65	Q6PI78	240 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	ETV3L	Q6ZN32	361 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	LINC00482	Q8N8I6	264 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	KLHL30-AS1	Q8NEE0	82 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	MYOZ3	Q8TDC0	251 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	P2RX4	Q99571	388 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	RNF126	Q9BV68	326 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	GPR61	Q9BZJ8	451 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	HIPK2	Q9H2X6	1198 aa		11.21	□□□□□ -0.61
ABR-223	ENST00000573895	LSM5	Q9Y4Y9	91 aa	Known RBP	11.21	□□□□□ -0.61
ABR-223	ENST00000573895	NUDT19	A8MXV4	375 aa		11.2	□□□□□ -0.62
ABR-223	ENST00000573895	ATP6V0E1	O15342	81 aa		11.2	□□□□□ -0.62
ABR-223	ENST00000573895	CA2	P00918	260 aa		11.2	□□□□□ -0.62
ABR-223	ENST00000573895	RPP30	P78346	268 aa	Known RBP	11.2	□□□□□ -0.62
ABR-223	ENST00000573895	ERH	P84090	104 aa	Known RBP	11.2	□□□□□ -0.62
ABR-223	ENST00000573895	LRRC37A5P	Q49AS3	106 aa		11.2	□□□□□ -0.62
ABR-223	ENST00000573895	C8orf86	Q6ZUL3	223 aa		11.2	□□□□□ -0.62
ABR-223	ENST00000573895	DTD1	Q8TEA8	209 aa		11.2	□□□□□ -0.62
ABR-223	ENST00000573895	HYLS1	Q96M11	299 aa		11.2	□□□□□ -0.62
ABR-223	ENST00000573895	TMEM68	Q96MH6	324 aa		11.2	□□□□□ -0.62
ABR-223	ENST00000573895	MAGT1	Q9H0U3	335 aa		11.2	□□□□□ -0.62
ABR-223	ENST00000573895	WSB1	Q9Y6I7	421 aa		11.2	□□□□□ -0.62
ABR-223	ENST00000573895	TRAV14DV4	A0A0A6YYC5	116 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	TRAV41	A0A0B4J266	112 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	HMSD	A8MTL9	139 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	IGLL1	P15814	213 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	P2RY1	P47900	373 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	GNB1	P62873	340 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.19	□□□□□ -0.62
ABR-223	ENST00000573895	ZFP69	Q49AA0	526 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	C19orf54	Q5BKX5	351 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895		Q5BKY6	102 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	C18orf65	Q6ZTR6	163 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	NOXA1	Q86UR1	476 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	SRSF12	Q8WXF0	261 aa	Known RBP	11.19	□□□□□ -0.62
ABR-223	ENST00000573895	ARPC1A	Q92747	370 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	UBE2E2	Q96LR5	201 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	MCRIP2	Q9BUT9	160 aa	Known RBP	11.19	□□□□□ -0.62
ABR-223	ENST00000573895	HINT2	Q9BX68	163 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	PLEKHA3	Q9HB20	300 aa		11.19	□□□□□ -0.62
ABR-223	ENST00000573895	HEYL	Q9NQ87	328 aa	Predicted RBP	11.19	□□□□□ -0.62
ABR-223	ENST00000573895	PARP11	Q9NR21	331 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms