RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 ISXQ2M1V0 245 aa13.5□□□□□ -0.25
CACNA1A-202ENST00000573710 CDCP2Q5VXM1 449 aa13.5□□□□□ -0.25
CACNA1A-202ENST00000573710 GCSAMQ8N6F7 178 aa13.5□□□□□ -0.25
CACNA1A-202ENST00000573710 UBE2E2Q96LR5 201 aa13.5□□□□□ -0.25
CACNA1A-202ENST00000573710 DDTP30046 118 aa13.5□□□□□ -0.25
CACNA1A-202ENST00000573710 ATXN8Q156A1 80 aa13.5□□□□□ -0.25
CACNA1A-202ENST00000573710 RPL39P5Q59GN2 51 aa13.5□□□□□ -0.25
CACNA1A-202ENST00000573710 RIMKLAQ8IXN7 391 aa13.5□□□□□ -0.25
CACNA1A-202ENST00000573710 H1FOOQ8IZA3 346 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-202ENST00000573710 TEX45Q8NA69 505 aa13.5□□□□□ -0.25
CACNA1A-202ENST00000573710 C21orf62Q9NYP8 219 aa13.5□□□□□ -0.25
CACNA1A-202ENST00000573710 TOGARAM1Q9Y4F4 1720 aa13.5□□□□□ -0.25
CACNA1A-202ENST00000573710 CD300EQ496F6 205 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-202ENST00000573710 RPRMQ9NS64 109 aa13.5□□□□□ -0.25
CACNA1A-202ENST00000573710 ODAMA1E959 279 aa13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 GLIPR1P48060 266 aa13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 CD300CQ08708 224 aa13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 C12orf73Q69YU5 71 aa13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 FGFRL1Q8N441 504 aa13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 SIGMAR1Q99720 223 aa13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 C8orf88P0DMB2 117 aa13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 ZNF474Q6S9Z5 364 aaPredicted RBP13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 KLK13Q9UKR3 277 aa13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 DLX4Q92988 240 aaPredicted RBP13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 EDIL3O43854 480 aa13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 ZNF250P15622 560 aa13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 TCTEX1D4Q5JR98 221 aa13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 C1orf53Q5VUE5 145 aa13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 PRADC1Q9BSG0 188 aa13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 TCF20Q9UGU0 1960 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 SURF2Q15527 256 aaPredicted RBP13.49□□□□□ -0.25
CACNA1A-202ENST00000573710 CHTOPQ9Y3Y2 248 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-202ENST00000573710 ARPC1AQ92747 370 aa13.48□□□□□ -0.25
CACNA1A-202ENST00000573710 KLF14Q8TD94 323 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-202ENST00000573710 MARS2Q96GW9 593 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-202ENST00000573710 CGAP01215 116 aa13.48□□□□□ -0.25
CACNA1A-202ENST00000573710 BSPH1Q075Z2 132 aa13.48□□□□□ -0.25
CACNA1A-202ENST00000573710 HAPLN4Q86UW8 402 aa13.48□□□□□ -0.25
CACNA1A-202ENST00000573710 C9orf40Q8IXQ3 194 aa13.48□□□□□ -0.25
CACNA1A-202ENST00000573710 HMSDA8MTL9 139 aa13.48□□□□□ -0.25
CACNA1A-202ENST00000573710 DMRT1Q9Y5R6 373 aa13.48□□□□□ -0.25
CACNA1A-202ENST00000573710 MED13Q9UHV7 2174 aa13.48□□□□□ -0.25
CACNA1A-202ENST00000573710 MARCH11A6NNE9 402 aa13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 C6orf226Q5I0X4 101 aa13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 DOCK2Q92608 1830 aa13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 FAM27E3Q08E93 113 aa13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 FER1L6-AS1Q8NA97 138 aa13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 TRAV5A0A0B4J249 113 aa13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 MZB1Q8WU39 189 aa13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 APOBEC3AP31941 199 aaPredicted RBP13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 ZNF79Q15937 498 aa13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 PUSL1Q8N0Z8 303 aaKnown RBP13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 OR52E5Q8NH55 327 aa13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 ZNF703Q9H7S9 590 aaPredicted RBP13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 A0A0J9YW62 118 aa13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 CRYGNQ8WXF5 182 aa13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 TAF15Q92804 592 aaKnown RBP eCLIP13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 C1orf43Q9BWL3 253 aa13.47□□□□□ -0.25
CACNA1A-202ENST00000573710 IGHV1-45A0A0A0MS14 117 aa13.46□□□□□ -0.25
CACNA1A-202ENST00000573710 RS1O15537 224 aa13.46□□□□□ -0.25
CACNA1A-202ENST00000573710 GAGE2BQ13066 116 aa13.46□□□□□ -0.25
CACNA1A-202ENST00000573710 TMEM8BA6NDV4 472 aa13.46□□□□□ -0.25
CACNA1A-202ENST00000573710 C10orf35Q96D05 121 aa13.46□□□□□ -0.25
CACNA1A-202ENST00000573710 TMEM30AQ9NV96 361 aa13.46□□□□□ -0.25
CACNA1A-202ENST00000573710 HS3ST3B1Q9Y662 390 aa13.46□□□□□ -0.25
CACNA1A-202ENST00000573710 TRGV1A0A0A0MS02 117 aa13.46□□□□□ -0.25
CACNA1A-202ENST00000573710 FGF12P61328 243 aa13.46□□□□□ -0.25
CACNA1A-202ENST00000573710 SCO2A0A1W2PP80 73 aa13.46□□□□□ -0.26
CACNA1A-202ENST00000573710 OR9G1Q8NH87 305 aa13.46□□□□□ -0.26
CACNA1A-202ENST00000573710 ERG28Q9UKR5 140 aa13.46□□□□□ -0.26
CACNA1A-202ENST00000573710 TNFRSF9Q07011 255 aa13.46□□□□□ -0.26
CACNA1A-202ENST00000573710 SFXN3Q9BWM7 321 aa13.46□□□□□ -0.26
CACNA1A-202ENST00000573710 SEC11AP67812 179 aa13.45□□□□□ -0.26
CACNA1A-202ENST00000573710 GNG5P63218 68 aa13.45□□□□□ -0.26
CACNA1A-202ENST00000573710 NDUFA2O43678 99 aa13.45□□□□□ -0.26
CACNA1A-202ENST00000573710 SIGLEC12Q96PQ1 595 aa13.45□□□□□ -0.26
CACNA1A-202ENST00000573710 DENND4AQ7Z401 1863 aa13.45□□□□□ -0.26
CACNA1A-202ENST00000573710 NCKAP5O14513 1909 aa13.45□□□□□ -0.26
CACNA1A-202ENST00000573710 CYP2G1PQ6ZSU1 146 aa13.45□□□□□ -0.26
CACNA1A-202ENST00000573710 ATG4DQ86TL0 474 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-202ENST00000573710 A8MWV9 139 aa13.45□□□□□ -0.26
CACNA1A-202ENST00000573710 IL6RP08887 468 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-202ENST00000573710 EGR4Q05215 589 aa13.45□□□□□ -0.26
CACNA1A-202ENST00000573710 P2RY6Q15077 328 aa13.45□□□□□ -0.26
CACNA1A-202ENST00000573710 CRYBA2P53672 197 aa13.44□□□□□ -0.26
CACNA1A-202ENST00000573710 LINC00518Q8N0U6 118 aa13.44□□□□□ -0.26
CACNA1A-202ENST00000573710 SLC25A28Q96A46 364 aa13.44□□□□□ -0.26
CACNA1A-202ENST00000573710 ADMP35318 185 aa13.44□□□□□ -0.26
CACNA1A-202ENST00000573710 MARVELD1Q9BSK0 173 aa13.44□□□□□ -0.26
CACNA1A-202ENST00000573710 KLF12Q9Y4X4 402 aa13.44□□□□□ -0.26
CACNA1A-202ENST00000573710 PLCH1Q4KWH8 1693 aa13.44□□□□□ -0.26
CACNA1A-202ENST00000573710 EREGO14944 169 aa13.44□□□□□ -0.26
CACNA1A-202ENST00000573710 ZAR1Q86SH2 424 aa13.44□□□□□ -0.26
CACNA1A-202ENST00000573710 VSIG8P0DPA2 414 aa13.44□□□□□ -0.26
CACNA1A-202ENST00000573710 PRSS22Q9GZN4 317 aa13.44□□□□□ -0.26
CACNA1A-202ENST00000573710 GREB1Q4ZG55 1949 aa13.44□□□□□ -0.26
CACNA1A-202ENST00000573710 PSMG4Q5JS54 123 aa13.44□□□□□ -0.26
CACNA1A-202ENST00000573710 TMEM219Q86XT9 240 aa13.44□□□□□ -0.26
CACNA1A-202ENST00000573710 B9A039 149 aa13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 PGLYRP1O75594 196 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms