RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 HSD17B13Q7Z5P4 300 aaPredicted RBP13.46□□□□□ -0.25
CHD3-214ENST00000572579 GGTLC1Q9BX51 225 aa13.46□□□□□ -0.25
CHD3-214ENST00000572579 C15orf61A6NNL5 157 aa13.45□□□□□ -0.26
CHD3-214ENST00000572579 EWSR1Q01844 656 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHD3-214ENST00000572579 OR1L6Q8NGR2 347 aa13.45□□□□□ -0.26
CHD3-214ENST00000572579 OR5B3Q8NH48 314 aa13.45□□□□□ -0.26
CHD3-214ENST00000572579 BSCL2Q96G97 398 aaPredicted RBP13.45□□□□□ -0.26
CHD3-214ENST00000572579 CMTM3Q96MX0 182 aa13.45□□□□□ -0.26
CHD3-214ENST00000572579 SCPEP1Q9HB40 452 aa13.45□□□□□ -0.26
CHD3-214ENST00000572579 UBQLN2Q9UHD9 624 aa13.45□□□□□ -0.26
CHD3-214ENST00000572579 PRNDQ9UKY0 176 aa13.45□□□□□ -0.26
CHD3-214ENST00000572579 LOC102724200A0A096LPH7 203 aaPredicted RBP13.44□□□□□ -0.26
CHD3-214ENST00000572579 I3L2K1 104 aa13.44□□□□□ -0.26
CHD3-214ENST00000572579 M0QYG6 137 aa13.44□□□□□ -0.26
CHD3-214ENST00000572579 TSPAN4O14817 238 aa13.44□□□□□ -0.26
CHD3-214ENST00000572579 SNAPC5O75971 98 aa13.44□□□□□ -0.26
CHD3-214ENST00000572579 UCP3P55916 312 aa13.44□□□□□ -0.26
CHD3-214ENST00000572579 ODF3L2Q3SX64 289 aa13.44□□□□□ -0.26
CHD3-214ENST00000572579 RBPMS2Q6ZRY4 209 aaKnown RBP13.44□□□□□ -0.26
CHD3-214ENST00000572579 OR2C3Q8N628 320 aa13.44□□□□□ -0.26
CHD3-214ENST00000572579 DAZ1Q9NQZ3 744 aaKnown RBP13.44□□□□□ -0.26
CHD3-214ENST00000572579 FAM212BQ9NTI7 297 aaPredicted RBP13.44□□□□□ -0.26
CHD3-214ENST00000572579 NDUFA4O00483 81 aa13.43□□□□□ -0.26
CHD3-214ENST00000572579 IGHV3-48P01763 117 aa13.43□□□□□ -0.26
CHD3-214ENST00000572579 SMIM18P0DKX4 95 aa13.43□□□□□ -0.26
CHD3-214ENST00000572579 TSPAN5P62079 268 aa13.43□□□□□ -0.26
CHD3-214ENST00000572579 CTF1Q16619 201 aa13.43□□□□□ -0.26
CHD3-214ENST00000572579 ANKRD55Q3KP44 614 aa13.43□□□□□ -0.26
CHD3-214ENST00000572579 SPSB3Q6PJ21 355 aa13.43□□□□□ -0.26
CHD3-214ENST00000572579 OR1P1Q8NH06 330 aa13.43□□□□□ -0.26
CHD3-214ENST00000572579 MRGPRFQ96AM1 343 aa13.43□□□□□ -0.26
CHD3-214ENST00000572579 ATP6V0BQ99437 205 aa13.43□□□□□ -0.26
CHD3-214ENST00000572579 SPAG8Q99932 426 aaPredicted RBP13.43□□□□□ -0.26
CHD3-214ENST00000572579 C20orf24Q9BUV8 137 aa13.43□□□□□ -0.26
CHD3-214ENST00000572579 KLK11Q9UBX7 282 aa13.43□□□□□ -0.26
CHD3-214ENST00000572579 SMIM31A0A1B0GVY4 71 aa13.42□□□□□ -0.26
CHD3-214ENST00000572579 K7EMT4 169 aa13.42□□□□□ -0.26
CHD3-214ENST00000572579 P0C879 139 aa13.42□□□□□ -0.26
CHD3-214ENST00000572579 PI3P19957 117 aa13.42□□□□□ -0.26
CHD3-214ENST00000572579 RCVRNP35243 200 aa13.42□□□□□ -0.26
CHD3-214ENST00000572579 RNASE12Q5GAN4 147 aaKnown RBP13.42□□□□□ -0.26
CHD3-214ENST00000572579 LHFPL1Q86WI0 220 aa13.42□□□□□ -0.26
CHD3-214ENST00000572579 UBAC2Q8NBM4 344 aa13.42□□□□□ -0.26
CHD3-214ENST00000572579 ABHD1Q96SE0 405 aa13.42□□□□□ -0.26
CHD3-214ENST00000572579 VCX3AQ9NNX9 186 aa13.42□□□□□ -0.26
CHD3-214ENST00000572579 KMT2AQ03164 3969 aa13.41□□□□□ -0.26
CHD3-214ENST00000572579 A0A0B4J293 547 aa13.41□□□□□ -0.26
CHD3-214ENST00000572579 IGKV1-5P01602 117 aa13.41□□□□□ -0.26
CHD3-214ENST00000572579 Q56UQ5 140 aa13.41□□□□□ -0.26
CHD3-214ENST00000572579 LPCAT3Q6P1A2 487 aa13.41□□□□□ -0.26
CHD3-214ENST00000572579 SLC38A6Q8IZM9 456 aa13.41□□□□□ -0.26
CHD3-214ENST00000572579 TMEM56Q96MV1 263 aa13.41□□□□□ -0.26
CHD3-214ENST00000572579 RNF2Q99496 336 aa13.41□□□□□ -0.26
CHD3-214ENST00000572579 FKBP11Q9NYL4 201 aa13.41□□□□□ -0.26
CHD3-214ENST00000572579 SMPXQ9UHP9 88 aa13.41□□□□□ -0.26
CHD3-214ENST00000572579 IGHV3-49A0A0A0MS15 119 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 C15orf62A8K5M9 175 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 CYB5BO43169 146 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 MT-CO2P00403 227 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 CTSDP07339 412 aaPredicted RBP13.4□□□□□ -0.26
CHD3-214ENST00000572579 RORCP51449 518 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 PRCDQ00LT1 54 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 ZNF124Q15973 351 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 SPINK9Q5DT21 86 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 LILRB2Q8N423 598 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 ZNF114Q8NC26 417 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 OR4D10Q8NGI6 311 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 OR52I2Q8NH67 350 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 OR10C1Q96KK4 312 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 TP53RKQ96S44 253 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 TSC22D3Q99576 134 aa13.4□□□□□ -0.26
CHD3-214ENST00000572579 CHEK1O14757 476 aa13.39□□□□□ -0.27
CHD3-214ENST00000572579 CD3DP04234 171 aa13.39□□□□□ -0.27
CHD3-214ENST00000572579 FCGR2BP31994 310 aaPredicted RBP13.39□□□□□ -0.27
CHD3-214ENST00000572579 RND3P61587 244 aa13.39□□□□□ -0.27
CHD3-214ENST00000572579 HSPE1P61604 102 aaKnown RBP13.39□□□□□ -0.27
CHD3-214ENST00000572579 H2BFWTQ7Z2G1 175 aa13.39□□□□□ -0.27
CHD3-214ENST00000572579 IL17DQ8TAD2 202 aa13.39□□□□□ -0.27
CHD3-214ENST00000572579 MISP3Q96FF7 219 aa13.39□□□□□ -0.27
CHD3-214ENST00000572579 IGHV7-4-1A0A0J9YVY3 117 aa13.38□□□□□ -0.27
CHD3-214ENST00000572579 GABARAPO95166 117 aa13.38□□□□□ -0.27
CHD3-214ENST00000572579 FAM90A2PQ658T7 463 aa13.38□□□□□ -0.27
CHD3-214ENST00000572579 PVRIGQ6DKI7 326 aa13.38□□□□□ -0.27
CHD3-214ENST00000572579 WFDC3Q8IUB2 231 aa13.38□□□□□ -0.27
CHD3-214ENST00000572579 OR4A16Q8NH70 328 aa13.38□□□□□ -0.27
CHD3-214ENST00000572579 RHPN1-AS1Q9BWJ2 59 aa13.38□□□□□ -0.27
CHD3-214ENST00000572579 NXF2Q9GZY0 626 aaKnown RBP13.38□□□□□ -0.27
CHD3-214ENST00000572579 MIXL1Q9H2W2 232 aa13.38□□□□□ -0.27
CHD3-214ENST00000572579 MTFP1Q9UDX5 166 aa13.38□□□□□ -0.27
CHD3-214ENST00000572579 IGHV3OR16-13A0A075B7E8 117 aa13.37□□□□□ -0.27
CHD3-214ENST00000572579 IGHV3-74A0A0B4J1X5 117 aa13.37□□□□□ -0.27
CHD3-214ENST00000572579 A0A0G2JRQ6 117 aa13.37□□□□□ -0.27
CHD3-214ENST00000572579 A0A0J9YWU9 116 aa13.37□□□□□ -0.27
CHD3-214ENST00000572579 APOHP02749 345 aaPredicted RBP13.37□□□□□ -0.27
CHD3-214ENST00000572579 RPL35AP18077 110 aaKnown RBP13.37□□□□□ -0.27
CHD3-214ENST00000572579 MFAP4P55083 255 aa13.37□□□□□ -0.27
CHD3-214ENST00000572579 PIGPP57054 158 aa13.37□□□□□ -0.27
CHD3-214ENST00000572579 SP6Q3SY56 376 aa13.37□□□□□ -0.27
CHD3-214ENST00000572579 Q6ZWC4 215 aa13.37□□□□□ -0.27
CHD3-214ENST00000572579 APRG1Q8IVJ8 170 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms