RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 HBA1P69905 142 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 PRDX4Q13162 271 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 SURF2Q15527 256 aaPredicted RBP4.09□□□□□ -1.75
SF3B3-214ENST00000572365 ACTBL2Q562R1 376 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 MRPL2Q5T653 305 aaKnown RBP4.09□□□□□ -1.75
SF3B3-214ENST00000572365 OTPQ5XKR4 325 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 FAAP20Q6NZ36 180 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 HEPN1Q6WQI6 88 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 Q6ZRG5 221 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 ZNF621Q6ZSS3 439 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.09□□□□□ -1.75
SF3B3-214ENST00000572365 MSRB3Q8IXL7 192 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 TMEM183AQ8IXX5 376 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 HIST3H2BBQ8N257 126 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 RPP25LQ8N5L8 163 aaKnown RBP4.09□□□□□ -1.75
SF3B3-214ENST00000572365 Q8NBF4 154 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 OR8U1Q8NH10 309 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 OR5AK2Q8NH90 309 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 CLCC1Q96S66 551 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 TXN2Q99757 166 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 ZNF649Q9BS31 505 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 NMES1Q9C002 83 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 SLC35B3Q9H1N7 401 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 CACFD1Q9UGQ2 172 aa4.09□□□□□ -1.75
SF3B3-214ENST00000572365 TRBV6-7A0A0A0MS04 114 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 A0A0B4J2A0 478 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 EPM2AB3EWF7 344 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 SCGNO76038 276 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 GYPAP02724 150 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 CD55P08174 381 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 CD3GP09693 182 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 ZNF32P17041 273 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 ADCYAP1P18509 176 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 FKBP2P26885 142 aaKnown RBP4.08□□□□□ -1.76
SF3B3-214ENST00000572365 PSMB6P28072 239 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 HTR1FP30939 366 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 OR10J1P30954 320 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 CSNK1A1P48729 337 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 SULT1A1P50225 295 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 SULT1A2P50226 295 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 CRISP3P54108 245 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 UBE2G2P60604 165 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 SELENOTP62341 195 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 ACTA2P62736 377 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 ACTG2P63267 376 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 HIST1H3AP68431 136 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 RPL19P84098 196 aaKnown RBP4.08□□□□□ -1.76
SF3B3-214ENST00000572365 FAM3AP98173 230 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 CDK6Q00534 326 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 CLINT1Q14677 625 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 ZNF146Q15072 292 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 RGNQ15493 299 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 HERC1Q15751 4861 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 C1orf194Q5T5A4 169 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 OR8G2PQ6IF36 304 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 ARL9Q6T311 187 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 UNQ9370/PRO34162Q6UXP9 181 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 SLC36A1Q7Z2H8 476 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 VTCN1Q7Z7D3 282 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 BHLHE23Q8NDY6 225 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 OR13C2Q8NGS9 318 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 ASB17Q8WXJ9 295 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 SLC35G5Q96KT7 338 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 NIPSNAP1Q9BPW8 284 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 MEPEQ9NQ76 525 aaPredicted RBP4.08□□□□□ -1.76
SF3B3-214ENST00000572365 TMEM38BQ9NVV0 291 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 TVP23BQ9NYZ1 205 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 DNAJC27Q9NZQ0 273 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 THYN1Q9P016 225 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 SHPKQ9UHJ6 478 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 CLEC2DQ9UHP7 191 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 STARD10Q9Y365 291 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 PKHD1P08F94 4074 aa4.08□□□□□ -1.76
SF3B3-214ENST00000572365 BORCS7-ASMTA0A0B4J1R7 106 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 A0A1B0GTI1 187 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 A0A1B0GV72 72 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 H7C423 109 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 K7EQG2 157 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 CDIPTO14735 213 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 SYNGR1O43759 233 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 LANCL1O43813 399 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 NPIPB7O75200 414 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 MMP23AO75900 390 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 CST4P01036 141 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 IGF2P01344 180 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 CSN2P05814 226 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 LIMS3P0CW19 117 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 LIMS4P0CW20 117 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 SRMP19623 302 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 HSD11B1P28845 292 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 CD34P28906 385 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 GNRHRP30968 328 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 RAB11AP62491 216 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 RBX1P62877 108 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 KLF5Q13887 457 aaPredicted RBP4.07□□□□□ -1.76
SF3B3-214ENST00000572365 GINS1Q14691 196 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 OR8B8Q15620 311 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 ECSCRQ19T08 205 aa4.07□□□□□ -1.76
SF3B3-214ENST00000572365 ACOT6Q3I5F7 207 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms