RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 RBMY1FQ15415 496 aaKnown RBP14.42□□□□□ -0.1
CCDC40-206ENST00000572083 HSD17B13Q7Z5P4 300 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-206ENST00000572083 OR1L8Q8NGR8 309 aa14.42□□□□□ -0.1
CCDC40-206ENST00000572083 CMTM3Q96MX0 182 aa14.42□□□□□ -0.1
CCDC40-206ENST00000572083 KRTAP4-5Q9BYR2 181 aa14.42□□□□□ -0.1
CCDC40-206ENST00000572083 SLC5A7Q9GZV3 580 aa14.42□□□□□ -0.1
CCDC40-206ENST00000572083 TRAV10A0A0B4J240 114 aa14.41□□□□□ -0.1
CCDC40-206ENST00000572083 CASQ2O14958 399 aaPredicted RBP14.41□□□□□ -0.1
CCDC40-206ENST00000572083 RTL8CO15255 209 aa14.41□□□□□ -0.1
CCDC40-206ENST00000572083 NUPL2O15504 423 aaKnown RBP14.41□□□□□ -0.1
CCDC40-206ENST00000572083 FGF2P09038 288 aa14.41□□□□□ -0.1
CCDC40-206ENST00000572083 RELQ04864 619 aaPredicted RBP14.41□□□□□ -0.1
CCDC40-206ENST00000572083 FAM90A2PQ658T7 463 aa14.41□□□□□ -0.1
CCDC40-206ENST00000572083 ZNF818PQ6ZRF7 136 aa14.41□□□□□ -0.1
CCDC40-206ENST00000572083 TCF24Q7RTU0 167 aa14.41□□□□□ -0.1
CCDC40-206ENST00000572083 ZBTB34Q8NCN2 500 aa14.41□□□□□ -0.1
CCDC40-206ENST00000572083 LSM10Q969L4 123 aaKnown RBP14.41□□□□□ -0.1
CCDC40-206ENST00000572083 OR10C1Q96KK4 312 aa14.41□□□□□ -0.1
CCDC40-206ENST00000572083 NDUFA4L2Q9NRX3 87 aa14.41□□□□□ -0.1
CCDC40-206ENST00000572083 M0R2N4 97 aa14.4□□□□□ -0.1
CCDC40-206ENST00000572083 DEFB131AP59861 70 aa14.4□□□□□ -0.1
CCDC40-206ENST00000572083 PAFAH1B2P68402 229 aa14.4□□□□□ -0.1
CCDC40-206ENST00000572083 AADACL3Q5VUY0 350 aa14.4□□□□□ -0.1
CCDC40-206ENST00000572083 FAM24BQ8N5W8 94 aa14.4□□□□□ -0.1
CCDC40-206ENST00000572083 BEST4Q8NFU0 473 aa14.4□□□□□ -0.1
CCDC40-206ENST00000572083 GIMAP1Q8WWP7 306 aa14.4□□□□□ -0.1
CCDC40-206ENST00000572083 VCXQ9H320 206 aa14.4□□□□□ -0.1
CCDC40-206ENST00000572083 PLEKHA2Q9HB19 425 aa14.4□□□□□ -0.1
CCDC40-206ENST00000572083 COMMD9Q9P000 198 aa14.4□□□□□ -0.1
CCDC40-206ENST00000572083 NSG2Q9Y328 171 aa14.4□□□□□ -0.1
CCDC40-206ENST00000572083 TRAV14DV4A0A0A6YYC5 116 aa14.39□□□□□ -0.11
CCDC40-206ENST00000572083 MARCH11A6NNE9 402 aa14.39□□□□□ -0.11
CCDC40-206ENST00000572083 PVRIGQ6DKI7 326 aa14.39□□□□□ -0.11
CCDC40-206ENST00000572083 C22orf42Q6IC83 251 aa14.39□□□□□ -0.11
CCDC40-206ENST00000572083 PRSS48Q7RTY5 328 aa14.39□□□□□ -0.11
CCDC40-206ENST00000572083 TMEM17Q86X19 198 aa14.39□□□□□ -0.11
CCDC40-206ENST00000572083 MS4A6AQ9H2W1 248 aa14.39□□□□□ -0.11
CCDC40-206ENST00000572083 FCER2P06734 321 aa14.38□□□□□ -0.11
CCDC40-206ENST00000572083 ERVK-16P61578 105 aa14.38□□□□□ -0.11
CCDC40-206ENST00000572083 STHQ8IWL8 128 aa14.38□□□□□ -0.11
CCDC40-206ENST00000572083 ST8SIA2Q92186 375 aa14.38□□□□□ -0.11
CCDC40-206ENST00000572083 NDUFB11Q9NX14 153 aa14.38□□□□□ -0.11
CCDC40-206ENST00000572083 OR51B2Q9Y5P1 312 aa14.38□□□□□ -0.11
CCDC40-206ENST00000572083 ELOA3CA0A087WX78 387 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-206ENST00000572083 DNASE2O00115 360 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-206ENST00000572083 ST8SIA3O43173 380 aa14.37□□□□□ -0.11
CCDC40-206ENST00000572083 GIG44P09565 113 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-206ENST00000572083 SLC25A46Q96AG3 418 aa14.37□□□□□ -0.11
CCDC40-206ENST00000572083 DGCR14Q96DF8 476 aaKnown RBP14.37□□□□□ -0.11
CCDC40-206ENST00000572083 RNF126Q9BV68 326 aa14.37□□□□□ -0.11
CCDC40-206ENST00000572083 IGHV3-66A0A0C4DH42 116 aa14.36□□□□□ -0.11
CCDC40-206ENST00000572083 TRDV1A0A1B0GX56 115 aa14.36□□□□□ -0.11
CCDC40-206ENST00000572083 SCGNO76038 276 aa14.36□□□□□ -0.11
CCDC40-206ENST00000572083 IGHV3-48P01763 117 aa14.36□□□□□ -0.11
CCDC40-206ENST00000572083 APOHP02749 345 aaPredicted RBP14.36□□□□□ -0.11
CCDC40-206ENST00000572083 EIF4EP06730 217 aaKnown RBP14.36□□□□□ -0.11
CCDC40-206ENST00000572083 MIFP14174 115 aa14.36□□□□□ -0.11
CCDC40-206ENST00000572083 ZNF767PQ75MW2 155 aa14.36□□□□□ -0.11
CCDC40-206ENST00000572083 ZNF367Q7RTV3 350 aa14.36□□□□□ -0.11
CCDC40-206ENST00000572083 CENPSQ8N2Z9 138 aa14.36□□□□□ -0.11
CCDC40-206ENST00000572083 LILRB2Q8N423 598 aa14.36□□□□□ -0.11
CCDC40-206ENST00000572083 POM121L12Q8N7R1 296 aa14.36□□□□□ -0.11
CCDC40-206ENST00000572083 LGALS14Q8TCE9 139 aa14.36□□□□□ -0.11
CCDC40-206ENST00000572083 MISP3Q96FF7 219 aa14.36□□□□□ -0.11
CCDC40-206ENST00000572083 NXF2Q9GZY0 626 aaKnown RBP14.36□□□□□ -0.11
CCDC40-206ENST00000572083 CELA1Q9UNI1 258 aa14.36□□□□□ -0.11
CCDC40-206ENST00000572083 DFFBO76075 338 aa14.35□□□□□ -0.11
CCDC40-206ENST00000572083 KRASP01116 189 aa14.35□□□□□ -0.11
CCDC40-206ENST00000572083 AMBPP02760 352 aa14.35□□□□□ -0.11
CCDC40-206ENST00000572083 RLN1P04808 185 aa14.35□□□□□ -0.11
CCDC40-206ENST00000572083 C4BPBP20851 252 aa14.35□□□□□ -0.11
CCDC40-206ENST00000572083 RPL11P62913 178 aaKnown RBP14.35□□□□□ -0.11
CCDC40-206ENST00000572083 DAPK2Q9UIK4 370 aa14.35□□□□□ -0.11
CCDC40-206ENST00000572083 X6R8D5 127 aa14.35□□□□□ -0.11
CCDC40-206ENST00000572083 DBX1A6NMT0 343 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 NOTOA8MTQ0 251 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 I3L2K1 104 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 P0DMU3 169 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 FAM231AP0DMU4 169 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 FAM231CP0DMU5 169 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 G6PCP35575 357 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 MFAP4P55083 255 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 AQP4P55087 323 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 TBCEQ15813 527 aaPredicted RBP14.34□□□□□ -0.11
CCDC40-206ENST00000572083 TRPT1Q86TN4 253 aaKnown RBP14.34□□□□□ -0.11
CCDC40-206ENST00000572083 HOGA1Q86XE5 327 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 ZNF575Q86XF7 245 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 OR1P1Q8NH06 330 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 TMEM56Q96MV1 263 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 GINS3Q9BRX5 216 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 SCRT1Q9BWW7 348 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 RHBDL2Q9NX52 303 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 RABAC1Q9UI14 185 aa14.34□□□□□ -0.11
CCDC40-206ENST00000572083 ZNF705EA8MWA4 302 aaPredicted RBP14.33□□□□□ -0.12
CCDC40-206ENST00000572083 EBAG9O00559 213 aa14.33□□□□□ -0.12
CCDC40-206ENST00000572083 SNAPC5O75971 98 aa14.33□□□□□ -0.12
CCDC40-206ENST00000572083 CD5P06127 495 aa14.33□□□□□ -0.12
CCDC40-206ENST00000572083 FCAMRQ8WWV6 532 aa14.33□□□□□ -0.12
CCDC40-206ENST00000572083 VSIRQ9H7M9 311 aa14.33□□□□□ -0.12
CCDC40-206ENST00000572083 CLEC5AQ9NY25 188 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms