RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 TIMD4Q96H15 378 aa13.35□□□□□ -0.27
RAB40B-206ENST00000571995 MBD3L4A6NDZ8 208 aaPredicted RBP13.34□□□□□ -0.27
RAB40B-206ENST00000571995 MBD3L3A6NE82 208 aaPredicted RBP13.34□□□□□ -0.27
RAB40B-206ENST00000571995 MBD3L5A6NJ08 208 aaPredicted RBP13.34□□□□□ -0.27
RAB40B-206ENST00000571995 C15orf62A8K5M9 175 aa13.34□□□□□ -0.27
RAB40B-206ENST00000571995 MBD3L2Q8NHZ7 208 aaPredicted RBP13.34□□□□□ -0.27
RAB40B-206ENST00000571995 FBXL15Q9H469 300 aa13.34□□□□□ -0.27
RAB40B-206ENST00000571995 LINC00869P0C866 280 aa13.34□□□□□ -0.27
RAB40B-206ENST00000571995 ARSJQ5FYB0 599 aaPredicted RBP13.34□□□□□ -0.27
RAB40B-206ENST00000571995 Q6ZS49 121 aa13.34□□□□□ -0.27
RAB40B-206ENST00000571995 HIVEP2P31629 2446 aa13.34□□□□□ -0.27
RAB40B-206ENST00000571995 A0A1B0GUS0 222 aa13.34□□□□□ -0.27
RAB40B-206ENST00000571995 KBTBD11O94819 623 aa13.34□□□□□ -0.27
RAB40B-206ENST00000571995 IL6RP08887 468 aaPredicted RBP13.34□□□□□ -0.27
RAB40B-206ENST00000571995 ZNF295-AS1Q8N0V1 137 aa13.34□□□□□ -0.27
RAB40B-206ENST00000571995 IL19Q9UHD0 177 aa13.34□□□□□ -0.27
RAB40B-206ENST00000571995 PCSK5Q92824 1860 aa13.34□□□□□ -0.27
RAB40B-206ENST00000571995 DSCAMO60469 2012 aa13.33□□□□□ -0.27
RAB40B-206ENST00000571995 TRAV5A0A0B4J249 113 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 CD81P60033 236 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 TBR1Q16650 682 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 TMEM14EPQ6UXP3 125 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 ASCL2Q99929 193 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 S100A8P05109 93 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 WNT2P09544 360 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 IL3RAP26951 378 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 RPL23P62829 140 aaKnown RBP13.33□□□□□ -0.28
RAB40B-206ENST00000571995 FAM90A2PQ658T7 463 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 IFI27L2Q9H2X8 130 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 ACANP16112 2415 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 J3QW42 95 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 IER3P46695 156 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 UBE2G1P62253 170 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 TREML4Q6UXN2 200 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 SDF2L1Q9HCN8 221 aa13.33□□□□□ -0.28
RAB40B-206ENST00000571995 HIST1H2BKO60814 126 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 HIST1H2BJP06899 126 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 HIST1H2BOP23527 126 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 HIST1H2BBP33778 126 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 HIST1H2BDP58876 126 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 HIST1H2BCP62807 126 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 HIST2H2BEQ16778 126 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.32□□□□□ -0.28
RAB40B-206ENST00000571995 C1QL4Q86Z23 238 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 HIST1H2BHQ93079 126 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 PACRGQ96M98 296 aaPredicted RBP13.32□□□□□ -0.28
RAB40B-206ENST00000571995 HIST1H2BNQ99877 126 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 HIST1H2BMQ99879 126 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 TCEAL7Q9BRU2 100 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 GNG4P50150 75 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 SUB1P53999 127 aaKnown RBP eCLIP13.32□□□□□ -0.28
RAB40B-206ENST00000571995 RNASE6Q93091 150 aaKnown RBP13.32□□□□□ -0.28
RAB40B-206ENST00000571995 TRBV6-6A0A0A6YYG2 114 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 DEFA6Q01524 100 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 HEPN1Q6WQI6 88 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 OR1L8Q8NGR8 309 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 PSMG3Q9BT73 122 aaPredicted RBP13.32□□□□□ -0.28
RAB40B-206ENST00000571995 IFT22Q9H7X7 185 aa13.32□□□□□ -0.28
RAB40B-206ENST00000571995 FAM90A26D6RGX4 464 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 PROP1O75360 226 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 SLC25A5P05141 298 aaKnown RBP13.31□□□□□ -0.28
RAB40B-206ENST00000571995 PQLC2Q6ZP29 291 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 OR5AU1Q8NGC0 362 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 NABP2Q9BQ15 211 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 PPIAL4CA0A0B4J2A2 164 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 CA1P00915 261 aaPredicted RBP13.31□□□□□ -0.28
RAB40B-206ENST00000571995 PPIAL4GP0DN37 164 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 CBLN1P23435 193 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 BRWD1-AS2P59051 145 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 KLF17Q5JT82 389 aaPredicted RBP13.31□□□□□ -0.28
RAB40B-206ENST00000571995 RYDENQ9NUL5 291 aaKnown RBP13.31□□□□□ -0.28
RAB40B-206ENST00000571995 NAT8BQ9UHF3 227 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 PRNDQ9UKY0 176 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 ADAMTS20P59510 1910 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 FCN1O00602 326 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 PMCHP20382 165 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 TMEM200BQ69YZ2 307 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 CDPF1Q6NVV7 123 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 CMTM2Q8TAZ6 248 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 DAZAP1Q96EP5 407 aaKnown RBP13.31□□□□□ -0.28
RAB40B-206ENST00000571995 POM121Q96HA1 1249 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 AGMATQ9BSE5 352 aa13.31□□□□□ -0.28
RAB40B-206ENST00000571995 METTL1Q9UBP6 276 aaKnown RBP13.31□□□□□ -0.28
RAB40B-206ENST00000571995 TMSB15BA0A087X1C1 80 aa13.3□□□□□ -0.28
RAB40B-206ENST00000571995 PNRC1Q12796 327 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-206ENST00000571995 MBNL2Q5VZF2 373 aaKnown RBP13.3□□□□□ -0.28
RAB40B-206ENST00000571995 PYYP10082 97 aa13.3□□□□□ -0.28
RAB40B-206ENST00000571995 RPL11P62913 178 aaKnown RBP13.3□□□□□ -0.28
RAB40B-206ENST00000571995 OR10G8Q8NGN5 311 aa13.3□□□□□ -0.28
RAB40B-206ENST00000571995 IGHV3-49A0A0A0MS15 119 aa13.3□□□□□ -0.28
RAB40B-206ENST00000571995 CXorf65A6NEN9 183 aa13.3□□□□□ -0.28
RAB40B-206ENST00000571995 C15orf65H3BRN8 121 aa13.3□□□□□ -0.28
RAB40B-206ENST00000571995 FAM222BQ8WU58 562 aa13.3□□□□□ -0.28
RAB40B-206ENST00000571995 GAFA1Q96PS6 74 aa13.3□□□□□ -0.28
RAB40B-206ENST00000571995 MGST2Q99735 147 aa13.3□□□□□ -0.28
RAB40B-206ENST00000571995 KLRD1Q13241 179 aa13.29□□□□□ -0.28
RAB40B-206ENST00000571995 C1orf229Q6ZS94 237 aaPredicted RBP13.29□□□□□ -0.28
RAB40B-206ENST00000571995 GGACTQ9BVM4 153 aa13.29□□□□□ -0.28
RAB40B-206ENST00000571995 HELTA6NFD8 242 aa13.29□□□□□ -0.28
RAB40B-206ENST00000571995 OR8I2Q8N0Y5 310 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 635 ms